prot_A-nodosum_M_contig875.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig875.5.1
Unique Nameprot_A-nodosum_M_contig875.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length183
Homology
BLAST of mRNA_A-nodosum_M_contig875.5.1 vs. uniprot
Match: A0A6H5L589_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L589_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 5.310e-41
Identity = 80/180 (44.44%), Postives = 112/180 (62.22%), Query Frame = 0
Query:    1 ARHAHNPAARHWKAVWKMISYLKATKDLGVVFRRGGDLKLSLFADEDYVSRYNDKRSISGVAVMLGNTAVRASSTTQHCVTLSTREAEYATIAHVVKTVLAEKAVLDFAQPHLSGRAIDATSE---AIKLANNPLSSKRTRHIDIKHHFIRDAVLVERVRVVYVASEDQHADVFTKALEK 177
            ARHAH PA RHWKA+ K+++YLK T+DLG+ ++RG  L L ++ D  Y     D+RS+SG+A  +G T +   S TQ  V+LS+ EAEY      VK  L  +AVL F  P  SG +I    +   A+ L  NPLSS R++HID+++HFIR       + + +V++ +QHADV TKA  K
Sbjct:  188 ARHAHAPAERHWKAIVKILAYLKETRDLGITYKRGSGLGLEVYVDASYADA-EDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGEISIKFVSTSEQHADVLTKAHSK 366          
BLAST of mRNA_A-nodosum_M_contig875.5.1 vs. uniprot
Match: A0A6H5KPN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN5_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 1.790e-40
Identity = 81/178 (45.51%), Postives = 107/178 (60.11%), Query Frame = 0
Query:    1 ARHAHNPAARHWKAVWKMISYLKATKDLGVVFRRGGDLKLSLFADEDYVSRYNDKRSISGVAVMLGNTAVRASSTTQHCVTLSTREAEYATIAHVVKTVLAEKAVLDFAQPHLSGRAIDATSE---AIKLANNPLSSKRTRHIDIKHHFIRDAVLVERVRVVYVASEDQHADVFTKAL 175
            ARHAH PA RHW A+ K++ YLK T+DLG+ ++RG  L L+++ D  Y     D+RS+SG+A  +G T V   S TQ  V+LS  EAEY      VK  L  +AV  F  P  SG +I    +   AI L  NPLSS RT+HID++ HFIR       + V +V + +QHAD+ TKAL
Sbjct:   65 ARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADT-EDRRSVSGLATTVGGTVVSHGSKTQSIVSLSATEAEYIAAEDGVKEALFVRAVQSFVVPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRFHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 241          
BLAST of mRNA_A-nodosum_M_contig875.5.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 6.180e-40
Identity = 80/180 (44.44%), Postives = 113/180 (62.78%), Query Frame = 0
Query:    1 ARHAHNPAARHWKAVWKMISYLKATKDLGVVFRRGGDLKLSLFADEDYVSRYNDKRSISGVAVMLGNTAVRASSTTQHCVTLSTREAEYATIAHVVKTVLAEKAVLDFAQPHLSGRAIDATSE---AIKLANNPLSSKRTRHIDIKHHFIRDAVLVERVRVVYVASEDQHADVFTKALEK 177
            ARHAH PA RHWKA+ K+++YLK T+DLG+ + RG  L L+++ D  Y     D+RS+SG+A  +G T +   S TQ  V+LS+ EAEY      VK  L  +AVL F  P  SG +I    +   A+ L  NPLSS R++HID+++HFIR       + + +V++ +QHAD+ TKAL K
Sbjct:  316 ARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADA-EDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSK 494          
BLAST of mRNA_A-nodosum_M_contig875.5.1 vs. uniprot
Match: A0A6H5KGI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGI0_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 8.930e-40
Identity = 80/178 (44.94%), Postives = 109/178 (61.24%), Query Frame = 0
Query:    1 ARHAHNPAARHWKAVWKMISYLKATKDLGVVFRRGGDLKLSLFADEDYVSRYNDKRSISGVAVMLGNTAVRASSTTQHCVTLSTREAEYATIAHVVKTVLAEKAVLDFAQPHLSGRAIDATSE---AIKLANNPLSSKRTRHIDIKHHFIRDAVLVERVRVVYVASEDQHADVFTKAL 175
            ARHAH PA RHW A+ K++ YLK T+DLG+ ++RG  L L+++ D  Y     DKRS++G+A  +G T V   S TQ  ++LS+ EAEY      VK  L  +AVL F  P  SG +I    +   AI L  NPLSS RT+HID+++HFI        + V +V + +QHAD+ TKAL
Sbjct:  193 ARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADT-EDKRSVTGMATTVGGTVVSHGSKTQSILSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIHGLFRSGDISVKFVPTTEQHADLLTKAL 369          
BLAST of mRNA_A-nodosum_M_contig875.5.1 vs. uniprot
Match: A0A6H5KGX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGX6_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 1.000e-39
Identity = 80/180 (44.44%), Postives = 113/180 (62.78%), Query Frame = 0
Query:    1 ARHAHNPAARHWKAVWKMISYLKATKDLGVVFRRGGDLKLSLFADEDYVSRYNDKRSISGVAVMLGNTAVRASSTTQHCVTLSTREAEYATIAHVVKTVLAEKAVLDFAQPHLSGRAIDATSE---AIKLANNPLSSKRTRHIDIKHHFIRDAVLVERVRVVYVASEDQHADVFTKALEK 177
            ARHAH PA RHWKA+ K+++YLK T+DLG+ + RG  L L+++ D  Y     D+RS+SG+A  +G T +   S TQ  V+LS+ EAEY      VK  L  +AVL F  P  SG +I    +   A+ L  NPLSS R++HID+++HFIR       + + +V++ +QHAD+ TKAL K
Sbjct:  403 ARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADA-EDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSK 581          
BLAST of mRNA_A-nodosum_M_contig875.5.1 vs. uniprot
Match: A0A6H5K4H5_9PHAE (CCHC-type domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4H5_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 2.990e-39
Identity = 80/180 (44.44%), Postives = 113/180 (62.78%), Query Frame = 0
Query:    1 ARHAHNPAARHWKAVWKMISYLKATKDLGVVFRRGGDLKLSLFADEDYVSRYNDKRSISGVAVMLGNTAVRASSTTQHCVTLSTREAEYATIAHVVKTVLAEKAVLDFAQPHLSGRAIDATSE---AIKLANNPLSSKRTRHIDIKHHFIRDAVLVERVRVVYVASEDQHADVFTKALEK 177
            ARHAH PA RHWKA+ K+++YLK T+DLG+ ++RG  L L ++ D  Y     D+RS+SG+A  +G T +   S TQ  V+LS+ EAEY      VK  L  +AVL F  P  SG +I    +   A+ L  NPLSS R++HID+++HFIR       + + +V++ +QHAD+ TKAL K
Sbjct: 1002 ARHAHAPAERHWKAIVKILAYLKETRDLGITYKRGSGLGLEVYVDASYADA-EDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSK 1180          
BLAST of mRNA_A-nodosum_M_contig875.5.1 vs. uniprot
Match: A0A6H5KGN1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGN1_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 3.600e-39
Identity = 82/178 (46.07%), Postives = 110/178 (61.80%), Query Frame = 0
Query:    1 ARHAHNPAARHWKAVWKMISYLKATKDLGVVFRRGGDLKLSLFADEDYVSRYNDKRSISGVAVMLGNTAVRASSTTQHCVTLSTREAEYATIAHVVKTVLAEKAVLDFAQPHLSGRAIDATSE---AIKLANNPLSSKRTRHIDIKHHFIRDAVLVERVRVVYVASEDQHADVFTKAL 175
            ARHAH PA RHW A+ K++ YLK T+DLG+ ++RG  L L+++ D  Y     D+RS+SG+A  +G T V   S TQ  V+LS+ EAEY      VK  L  +AVL F  P  SG +I    +   AI L  NPLSS RT+HID+++HFIR       + V +V + +QHAD+ TKAL
Sbjct:  661 ARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADT-EDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 837          
BLAST of mRNA_A-nodosum_M_contig875.5.1 vs. uniprot
Match: A0A6H5L715_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L715_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 4.180e-39
Identity = 80/180 (44.44%), Postives = 113/180 (62.78%), Query Frame = 0
Query:    1 ARHAHNPAARHWKAVWKMISYLKATKDLGVVFRRGGDLKLSLFADEDYVSRYNDKRSISGVAVMLGNTAVRASSTTQHCVTLSTREAEYATIAHVVKTVLAEKAVLDFAQPHLSGRAIDATSE---AIKLANNPLSSKRTRHIDIKHHFIRDAVLVERVRVVYVASEDQHADVFTKALEK 177
            ARHAH PA RHWKA+ K+++YLK T+DLG+ + RG  L L+++ D  Y     D+RS+SG+A  +G T +   S TQ  V+LS+ EAEY      VK  L  +AVL F  P  SG +I    +   A+ L  NPLSS R++HID+++HFIR       + + +V++ +QHAD+ TKAL K
Sbjct: 1382 ARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADA-EDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSK 1560          
BLAST of mRNA_A-nodosum_M_contig875.5.1 vs. uniprot
Match: A0A6H5JNN1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN1_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 4.240e-39
Identity = 80/180 (44.44%), Postives = 113/180 (62.78%), Query Frame = 0
Query:    1 ARHAHNPAARHWKAVWKMISYLKATKDLGVVFRRGGDLKLSLFADEDYVSRYNDKRSISGVAVMLGNTAVRASSTTQHCVTLSTREAEYATIAHVVKTVLAEKAVLDFAQPHLSGRAIDATSE---AIKLANNPLSSKRTRHIDIKHHFIRDAVLVERVRVVYVASEDQHADVFTKALEK 177
            ARHAH PA RHWKA+ K+++YLK T+DLG+ + RG  L L+++ D  Y     D+RS+SG+A  +G T +   S TQ  V+LS+ EAEY      VK  L  +AVL F  P  SG +I    +   A+ L  NPLSS R++HID+++HFIR       + + +V++ +QHAD+ TKAL K
Sbjct: 1480 ARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADA-EDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSK 1658          
BLAST of mRNA_A-nodosum_M_contig875.5.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 5.570e-39
Identity = 82/178 (46.07%), Postives = 110/178 (61.80%), Query Frame = 0
Query:    1 ARHAHNPAARHWKAVWKMISYLKATKDLGVVFRRGGDLKLSLFADEDYVSRYNDKRSISGVAVMLGNTAVRASSTTQHCVTLSTREAEYATIAHVVKTVLAEKAVLDFAQPHLSGRAIDATSE---AIKLANNPLSSKRTRHIDIKHHFIRDAVLVERVRVVYVASEDQHADVFTKAL 175
            ARHAH PA RHW A+ K++ YLK T+DLG+ ++RG  L L+++ D  Y     D+RS+SG+A  +G T V   S TQ  V+LS+ EAEY      VK  L  +AVL F  P  SG +I    +   AI L  NPLSS RT+HID+++HFIR       + V +V + +QHAD+ TKAL
Sbjct: 1053 ARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADT-EDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1229          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig875.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L589_9PHAE5.310e-4144.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPN5_9PHAE1.790e-4045.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCG0_9PHAE6.180e-4044.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KGI0_9PHAE8.930e-4044.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGX6_9PHAE1.000e-3944.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4H5_9PHAE2.990e-3944.44CCHC-type domain-containing protein n=11 Tax=Ectoc... [more]
A0A6H5KGN1_9PHAE3.600e-3946.07Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L715_9PHAE4.180e-3944.44CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JNN1_9PHAE4.240e-3944.44CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KSG8_9PHAE5.570e-3946.07Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 55..181
NoneNo IPR availablePANTHERPTHR11439:SF355CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8coord: 55..181
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 43..178
e-value: 1.09281E-37
score: 124.888

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig875contigA-nodosum_M_contig875:112555..113966 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig875.5.1mRNA_A-nodosum_M_contig875.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig875 112555..113966 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig875.5.1 ID=prot_A-nodosum_M_contig875.5.1|Name=mRNA_A-nodosum_M_contig875.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=183bp
ARHAHNPAARHWKAVWKMISYLKATKDLGVVFRRGGDLKLSLFADEDYVS
RYNDKRSISGVAVMLGNTAVRASSTTQHCVTLSTREAEYATIAHVVKTVL
AEKAVLDFAQPHLSGRAIDATSEAIKLANNPLSSKRTRHIDIKHHFIRDA
VLVERVRVVYVASEDQHADVFTKALEKKRFEK*
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