prot_A-nodosum_M_contig874.25.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig874.25.1
Unique Nameprot_A-nodosum_M_contig874.25.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length884
Homology
BLAST of mRNA_A-nodosum_M_contig874.25.1 vs. uniprot
Match: A0A6H5KJ25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ25_9PHAE)

HSP 1 Score: 621 bits (1601), Expect = 2.800e-206
Identity = 451/813 (55.47%), Postives = 518/813 (63.71%), Query Frame = 0
Query:    3 SNADVVAGGLDAYLKALLAVPAVVQSEVFSGFLEAQGRRCEEREXXXXXXXXXXGWSGGSRAEKVNNIYGDTNIHGTGAPRTPETAVDFLLQPFDYGEAYVRRRSKHTERIDVLRGESVVWKFEVLDHLDINFSVVFRPHPVPLSPLVPEVATCENDG-----AEPSENPSLKAT---TSSKPNGRS-RRSGWWGSGSGGDSNVGRRGEVKA-------GCGAKAGAEAGGSERESALAPKKQIVHLPTRYSTGGGDLVQGSFTCPADGTCLLRWDNSYSRLRGKRLRFVVESATVATMRAAIEAAGATEHKRRNTRSAAARAILDSDQGEVRVSVMAVGIGDDLGREAEDEGVG-DGSDSGGNAGVS--YYYPSQYKFGRVRRIAATLLRDLGTMLDANETADGVVGEMTATSTDSGL---SSGGVLRNAGTRAS--------VDARGVETLVARFEVLEDEVAAMSARRAQCEAQAKVLLANLQKANTKVDRLERALAETRELLSVTRRDLGEVEATRDEALAEAKRVGSRLQTSEEQLLRSKRELDLLKAERSVWQVARSGIQEELAKVVAELELXXXXXXXXSRALAKSHXXXXXXXXXAARLSRRLEEERGGAGGARAALAAERETSRLAREEAEDXXXXXXXXXXXXXXXGAQKRVLVAGLRARERALGDRCAAAEARAEEAGMMRRAAEGRVRELKEEAERREAAQADAEIRLQRLRAEKKILLAEIRRGASGGGNXXXXXXXXXXGAGIGVEEREK----RREAGEEGLGDSGSEGGXXXXXXXXXQRGLLSPRGTGDSAQDRKA 781
            S++  +A GLDAYLKALL VPAV+QS+VFSGFL   G            XXXXX   G   A +              A ++PETA+DFLLQPF+YG AYV RR++HTE IDVLRGESVVWKFEVLDHLDI+FSV FRPHP+  S   P  A  + DG     AE +E+  +  T    +S P  R     G   S + GDS     G  ++       GCG  AG   GG+   +  APK + VHLPTRYSTGGGD VQGSF+CPA GTC+LRWDN++SRLRGKRL FV ES TV TM+AAIEAAGA +HKRR  RSAAA+ ILDS +GEV+V V AVG  DD     ED   G DG     +AG S   YY S Y+FGRVRR+ A LLRDLG M+D   T+ G+ G   A S   G    SSGG   + G  ++        V+A GV  LVA+FE+LEDEVA++SARRAQ EAQAKVLLANLQK+N + DRLER+L ETRE LS  R  L E E  RDEA A A   G+RLQTSEEQLLR++R+ +LL+AERSVW VARSGIQEELAKVVAELE         SRALAKSH XXXXXXXXAARLSRRLEEERGGAGGARAALAAERE SRLAREEAED               GAQKRVLVAGLRARERALGDRCA AEARAE                       EAAQAD E+RLQRLRAEKK+LLAE+RRGA G G             G G +E E     R   G++  G  G+ GG         +RG LSPR +G + QD KA
Sbjct:  165 SSSAELAQGLDAYLKALLTVPAVIQSQVFSGFLAESG-----------GXXXXXXXXGACSASEE-------------ARKSPETAIDFLLQPFEYGRAYVPRRAEHTESIDVLRGESVVWKFEVLDHLDIDFSVTFRPHPLAASSRRPLEA--DEDGGRPPTAEEAEDLGVLDTGVGLASSPGPRGVGNGGVAASSANGDSGSTEAGRKRSRWWSRSGGCGGAAGEAVGGTGVGAVSAPKGETVHLPTRYSTGGGDPVQGSFSCPAAGTCILRWDNAFSRLRGKRLCFVFESVTVQTMQAAIEAAGAADHKRRAARSAAAQTILDSGRGEVKVCVTAVGAADDYSGGEEDGKEGNDGGIYSVSAGSSDAIYYSSLYRFGRVRRVVAGLLRDLGGMVDVTRTSGGIDGAAIAESGRGGSGSGSSGGSAFDVGRGSAGRGDRYGNVNAEGVAKLVAQFELLEDEVASVSARRAQSEAQAKVLLANLQKSNARTDRLERSLEETREDLSTVRETLRETETARDEAAAAATEAGARLQTSEEQLLRARRQHNLLQAERSVWHVARSGIQEELAKVVAELEQERHRHEDTSRALAKSHEXXXXXXXXAARLSRRLEEERGGAGGARAALAAEREASRLAREEAEDARTAVAELDAAVAELGAQKRVLVAGLRARERALGDRCAGAEARAEXXXXXXXXXXXXXXXXXXXXXXXEAAQADGEVRLQRLRAEKKVLLAEVRRGAGGEGGGAAAGVSA---GGDGGKESEGVGSLRGVVGDDARGREGAGGGSGGSS----RRGSLSPRSSGKNVQDNKA 944          
BLAST of mRNA_A-nodosum_M_contig874.25.1 vs. uniprot
Match: D8LGY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY0_ECTSI)

HSP 1 Score: 364 bits (935), Expect = 5.380e-112
Identity = 279/608 (45.89%), Postives = 323/608 (53.12%), Query Frame = 0
Query:   29 EVFSGFLEAQGRRCEEREXXXXXXXXXXGWSGGSRAEKVNNIYGDTNIH----GTGAPRTPETAVDFLLQPFDYGEAYVRRRSKHTERIDVLRGESVVWKFEVLDHLDINFSVVFRPHPVPLSPLVPEVATCENDGAEPS--------------------ENPSLKAT-----TSSKPNGRS-------RRSGWWGSGSGGDSNVGRRGEVKAGCGAKAGAEAGGSERESALAPKKQIVHLPTRYSTGGGDLVQGSFTCPADGTCLLRWDNSYSRLRGKRLRFVVESATVATMRAAIEAAGATEHKRRNTRSAAARAILDSDQGEVRVSVMAVGIGDDLGREAEDEGVGDGSDSGGNAGVSYYYPSQYKFGRVRRIAATLLRDLGTMLDANETADGVVGEMTATSTDSGLSSGGVLRNAGTRASVDARGVETLVARFEVLEDEVAAMSARRAQCEAQAKVLLANLQKANTKVDRLERALAETRELLSVTRRDLGEVEATRDEALAEAKRVGSRLQTSEEQLLRSKRELDLLKAERSVWQVARSGIQEELAKVVAELELXXXXXXXXSRALAKSHXXXXXXXXXAARLSRRLEEERGGAGGARAALAAE 600
            EVFSGFLE   RR                  G ++ ++     GD +      G  A ++PETA+DFLLQPF+YG AYV RR++HTE IDVLRGESVVWKFEVLDHLDI+FSV FRPHP+  S   P  A  + DG  PS                     +P  +        +S  NG S       +RS WWG          R G    GC   AG   GG+   +  APK + VHLPTRYSTGGGD VQGSF+CPA GTC+LRWDN++SRLRGKRL FV ES TV TM+AAIEAAGA +HKRR  RSAAA+ ILDS +GEV+V V AVG  DD G + ED                           V+ + A  L                                                   LV R                         + NL   +T V+RLER+L ETRE LS  R+ L E E  RDEA A A    + LQTSEEQLLR++R+ DLL+AERSVW VARSGIQEELAKVVAELE         SRALAKSH XXXXXXXXAARLSRRLEEERGGAGGAR  LA+E
Sbjct:  107 EVFSGFLEEHSRRRHR---------------GANKEDEEKESGGDGSAGACSTGEEARKSPETAIDFLLQPFEYGRAYVPRRAEHTESIDVLRGESVVWKFEVLDHLDIDFSVTFRPHPLASSSRRPLEA--DEDGGRPSTAEEQEEEDRGVLDAGVGLASSPGPRGVGNGGVAASSANGDSSGTEAGRKRSRWWG----------RSG----GCEGAAGDADGGTGGGAVSAPKGETVHLPTRYSTGGGDPVQGSFSCPAAGTCILRWDNAFSRLRGKRLCFVFESVTVQTMQAAIEAAGAADHKRRAARSAAAQTILDSGRGEVKVCVTAVGAADDYGGDEED---------------------------VKEVGAAFL--------------------------------------------------ALVPRN------------------------VMNLPSFHT-VERLERSLEETREDLSTVRKTLRETETARDEAAAAAAEASAGLQTSEEQLLRARRQHDLLQAERSVWHVARSGIQEELAKVVAELEQERHRHEDTSRALAKSHEXXXXXXXXAARLSRRLEEERGGAGGAREDLASE 581          
BLAST of mRNA_A-nodosum_M_contig874.25.1 vs. uniprot
Match: A0A835ZFW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW3_9STRA)

HSP 1 Score: 219 bits (557), Expect = 7.590e-57
Identity = 231/679 (34.02%), Postives = 305/679 (44.92%), Query Frame = 0
Query:    4 NADVVAGGLDAYLKALLAVPAVVQSEVFSGFLEAQGRRCEEREXXXXXXXXXXGWSGGSRAEKVNNIYGDTNIHGTGAPRTPETAVDFLLQPFDYGEAYVRRRSKHTERIDVLRGESVVWKFEVLDHLDINFSVVFRPHPVPLSPLVPEVATCENDGAEPSENPSLKATTSSKPNGRSRRS-GWWGSGSGGDSNVGRRGEVKAGCGAKAGAEAGGSERESALAPKKQIVHLPTRYSTGGGDLVQGSFTCPADGTCLLRWDNSYSRLRGKRLRFVVESATVATMRAAIEAAGATEHKRRNTRSAAARAILDSDQGEVRVSVMAVGIGDDLGREAEDEGVGDGSDSGGNAGVSYYYPSQYKFG---RVRRIAATLLRDLGTMLDANETADGVVGEMTATSTDSGLSSGGVLRNAGTRASVDARGVETLVARFEVLEDEVAAMSARRAQCEAQAKVLLANLQKANTKVDRLERALAETR-ELLSVTRRDLGEVEATRDEALAEAKRVGSRLQTSEEQLLRSKRELDLLKAERSVWQVARSGIQEELAKVVAELELXXXXXXXXSRALAKSHXXXXXXXXXAARLSRRLEEERGGAGGARAALAAERETSRLAREEAEDXXXXXXXXXXXXXXXGAQKRVLVAGLRARERALGDRCAAAEARAEEAGMMRRAAEGRVRELKEE 677
            +AD  A  L++Y++ LLAVPAV+ S  FSGFL                     G  GGS  E  +                P+TA+ FLLQPF     YV RR +++  + +L+GESV W+F+V   LDI+F+V F P              CE                S+  +G  RR  GW G        V    E   GC         G   E A  P+  +VH  TRY   GG  VQGS T  ADG C LRW N +SRLRGKRL FV E+   A MRAA++AA A   K    R  +A+  +        VSV                     S  GG+     +  ++  +     V R++       G                            G+       +  + R V TL+  +E LEDE+A MSARRAQ EAQ KVLLA LQ+A   V   +     TR EL  +TRR   ++   R+EAL EA         +EE+LL ++RE +LL+AERSVWQVARSGIQ ELA+ V  LE           AL +S            RL+ R+      A G R A    +E +  AR E+ED                AQKR+LV  LR +++A  D+ +A +A AEEA MM+RAAE R+++L+ E
Sbjct:  132 DADATAAALNSYMQRLLAVPAVLASAKFSGFL---------------------GGDGGSPPEGGSAXXXXXXXXXXXGRGEPQTAIGFLLQPFAPHCVYVPRRQEYSRELVILKGESVAWRFDVDCGLDIDFTVEFTP--------------CEVH------------QRSALVSGEGRRQRGWLG-------YVSPASEGAGGC--------TGDGVEGA--PRSVLVHRRTRYP--GGARVQGSCTSAADGLCALRWGNGHSRLRGKRLYFVAEAVDAAAMRAAVQAADACAFKASAARGGSAQQRITPGAA---VSVXXXXXXXXXXXXXXXXXXXXXSPGGGDPPAGRFSLTRSAYNLVWNVLRLSPYYGLGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGL-------SEYEER-VATLLVNYERLEDELAGMSARRAQAEAQTKVLLAQLQRAKADVASAQEGWQGTRAELCEMTRR-ADDMALEREEALQEAHSAERAQLQAEERLLAARRECELLQAERSVWQVARSGIQSELARAVGALETEKHAHEDARAALKRSQTAVERLEAERQRLAERVA-----AAGDREAQERLKEEAAAARAESEDVRVALAEVEAETAKLSAQKRLLVVELRQQKKAFLDQLSAVQAEAEEARMMQRAAETRLKKLEGE 727          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig874.25.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KJ25_9PHAE2.800e-20655.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGY0_ECTSI5.380e-11245.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZFW3_9STRA7.590e-5734.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 604..631
NoneNo IPR availableCOILSCoilCoilcoord: 657..705
NoneNo IPR availableCOILSCoilCoilcoord: 506..526
NoneNo IPR availableCOILSCoilCoilcoord: 538..558
NoneNo IPR availableCOILSCoilCoilcoord: 422..484
NoneNo IPR availableCOILSCoilCoilcoord: 776..803
NoneNo IPR availableGENE3D2.60.120.680GOLD domaincoord: 92..280
e-value: 9.1E-18
score: 66.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 843..859
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 712..785
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 730..745
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 843..871
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 556..585
IPR036598GOLD domain superfamilySUPERFAMILY101576Supernatant protein factor (SPF), C-terminal domaincoord: 100..279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig874contigA-nodosum_M_contig874:139815..144322 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig874.25.1mRNA_A-nodosum_M_contig874.25.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig874 139599..144871 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig874.25.1 ID=prot_A-nodosum_M_contig874.25.1|Name=mRNA_A-nodosum_M_contig874.25.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=884bp
MKSNADVVAGGLDAYLKALLAVPAVVQSEVFSGFLEAQGRRCEEREEGGG
GGDVGGGWSGGSRAEKVNNIYGDTNIHGTGAPRTPETAVDFLLQPFDYGE
AYVRRRSKHTERIDVLRGESVVWKFEVLDHLDINFSVVFRPHPVPLSPLV
PEVATCENDGAEPSENPSLKATTSSKPNGRSRRSGWWGSGSGGDSNVGRR
GEVKAGCGAKAGAEAGGSERESALAPKKQIVHLPTRYSTGGGDLVQGSFT
CPADGTCLLRWDNSYSRLRGKRLRFVVESATVATMRAAIEAAGATEHKRR
NTRSAAARAILDSDQGEVRVSVMAVGIGDDLGREAEDEGVGDGSDSGGNA
GVSYYYPSQYKFGRVRRIAATLLRDLGTMLDANETADGVVGEMTATSTDS
GLSSGGVLRNAGTRASVDARGVETLVARFEVLEDEVAAMSARRAQCEAQA
KVLLANLQKANTKVDRLERALAETRELLSVTRRDLGEVEATRDEALAEAK
RVGSRLQTSEEQLLRSKRELDLLKAERSVWQVARSGIQEELAKVVAELEL
ERHRHEDTSRALAKSHESRAHAEAEAARLSRRLEEERGGAGGARAALAAE
RETSRLAREEAEDARAAVAELDAAVAELGAQKRVLVAGLRARERALGDRC
AAAEARAEEAGMMRRAAEGRVRELKEEAERREAAQADAEIRLQRLRAEKK
ILLAEIRRGASGGGNGGTGSGPSVGGAGIGVEEREKRREAGEEGLGDSGS
EGGSGSIGGGGSQRGLLSPRGTGDSAQDRKATLKQLSRQLVHLRERQHHL
REDLRSDPNNTSAQRLEADVDRAVQNLETRIKRLLSVVSGERVEKASSAS
ASSSPPRKVAMKRSITASPVETNETAEVETFSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036598GOLD_dom_sf