prot_A-nodosum_M_contig8729.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8729.2.1
Unique Nameprot_A-nodosum_M_contig8729.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length280
Homology
BLAST of mRNA_A-nodosum_M_contig8729.2.1 vs. uniprot
Match: D7FH82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH82_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 7.240e-15
Identity = 71/250 (28.40%), Postives = 108/250 (43.20%), Query Frame = 0
Query:   35 GSSICTLWSAIALGALFAGRPTESVASYVRLARNALRSSKGSSVTETVRAWCLLGHADELTGDTEGFTQCLHSTETFVQEKIRRGQEGDIPSWLNDSITFFKARTNLVSEDSKEILELFCSKDIAPPPEISSASSDIEIYVFITRTKIKMYQAMCGCYGGDRRAFSKSENHSDESLEDLHGAEQPKAQGLQARHGTIGERLDIAAVERLKGALSITG----PLELLMQRPNIRGGVIEGVIQSTLAIAKA 280
            GSS CT W A+ALGAL  G P  SVA Y  LAR+A+ S  G   T   +AW +L       GDT+ F + +  +E F       G    +P    + ++            S   +E FC +    PP++ +A+S+ E+Y F+ +   +  QA+       R A+ +S         D  G       G++     + E   +A V+ +   +S        LE +  RP IR G+   +I  TL   KA
Sbjct:   72 GSSTCTFWCAVALGALVKGGPVTSVARYSELARDAVESYSGPVTTGVAKAWVILAFLYLFHGDTDMFQEYMARSEAFFSASGAYGSTEVLPVGYAEVVSHRMTVRMFSGNASTSEVESFCRQP-QDPPQLKAAASETELYAFMMQAYREFEQAVY------RTAYLESS--------DAGGLPSENEAGIRTCSSRVREA-SMAVVDTMASRISNHSCDFERLEDVADRPLIRQGIGGLIINGTLVFEKA 305          
BLAST of mRNA_A-nodosum_M_contig8729.2.1 vs. uniprot
Match: A0A6H5JMP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP5_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.190e-8
Identity = 70/240 (29.17%), Postives = 102/240 (42.50%), Query Frame = 0
Query:   20 SPLKMS-GGDEVWGAKGS------SICTLWSAIALGALFAGRPTESVASYVRLARNAL-RSSKGSSVTETVRAWCLLGHADELTGDTEGFTQCLHSTETFVQEKIRRGQEGDIPSWLNDSITFFKARTNLVSEDSKEILELFCSKDIAPPPEISSASSDIEIYVFITRTKIKM----YQAMCGCYGGDRRAFSKSENHS-----DESLEDLHGAEQPKA------QGLQARHGTIGERLD 236
            SP +++ GGD V  + G+      S CTLW A+ALGAL  GRP ESV SY +LA+ AL +SS G    E  + W +L +     GD +GF +                            I  FK   N VS    +   L    +  PPP++   +++ E+Y +++++ + +    Y  M             SE H        SLEDL  A+  KA       G     GT+ E +D
Sbjct:  110 SPSRVAPGGDLVKTSAGNQFPMDPSACTLWCAVALGALIKGRPIESVTSYAQLAKGALAKSSSGPGGAEVAKVWVILANLHGFMGD-KGFAE----------------------------IVKFKDIAN-VSCGKWQAEYLPVQGEFLPPPQLIEVATEAELYRYVSQSCVALAEAIYTTMIEQSASGGNGLYDSEPHGRAGGVHRSLEDLMAADFSKALTSLLDDGDVIDFGTLQEAVD 319          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8729.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FH82_ECTSI7.240e-1528.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMP5_9PHAE1.190e-829.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8729contigA-nodosum_M_contig8729:3912..8126 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8729.2.1mRNA_A-nodosum_M_contig8729.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8729 3910..8126 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8729.2.1 ID=prot_A-nodosum_M_contig8729.2.1|Name=mRNA_A-nodosum_M_contig8729.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=280bp
SQKYGEKAEKNTHILPGVTSPLKMSGGDEVWGAKGSSICTLWSAIALGAL
FAGRPTESVASYVRLARNALRSSKGSSVTETVRAWCLLGHADELTGDTEG
FTQCLHSTETFVQEKIRRGQEGDIPSWLNDSITFFKARTNLVSEDSKEIL
ELFCSKDIAPPPEISSASSDIEIYVFITRTKIKMYQAMCGCYGGDRRAFS
KSENHSDESLEDLHGAEQPKAQGLQARHGTIGERLDIAAVERLKGALSIT
GPLELLMQRPNIRGGVIEGVIQSTLAIAKA
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