prot_A-nodosum_M_contig872.20.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig872.20.2
Unique Nameprot_A-nodosum_M_contig872.20.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1042
Homology
BLAST of mRNA_A-nodosum_M_contig872.20.2 vs. uniprot
Match: D8LDS8_ECTSI (SECIS binding protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS8_ECTSI)

HSP 1 Score: 385 bits (989), Expect = 5.360e-115
Identity = 331/934 (35.44%), Postives = 434/934 (46.47%), Query Frame = 0
Query:  172 EISPPTGNGRGPPLCKGKSAGGKTDLMPKRSVHRLPGSGENVRKLGKQRLGQKKRKLSSLKKRILLHRAAQW-------GYEMSSSVGRSSSYSCTEA-------------------------KSISTARAG------QLWVVNIRNLIDEEDVEDEEDRVEVERDLRHMASEFGGVIRVEVPRSL-------ELSGTTAV-EVAPV--KVFFPTPEEAERARAGFHGRVVAGNTLEAEVTDELTEREENVDVVTCGKNGGGVMNTEENRERSDSCSLARGTDAPFSPKGAKVEKVAASAARASAAAQCPNLTRLEDSKKDDRLCGAHIVASPDHP--WVVVVRNLIDVEDDLEEDEDYAEVYVDTTEIVGAYSRPVSVNIVSFKNDGEGEGEGD----------QVREVIATFASRGEAEQCVAGLHGRRIGGKELTVELVEPPADLDLPSDAL-----EHGSIGNIGLSLAHGAAEAPSDTRTTTRGKGTWKMEIGDGSDGGGVGTIAATSAPKCSARLGETTAAHG----WRVVVRNLIEHEDLEEDDD-YAESRADFAAMTSEYGHVSALYIPRSEEEAIGACAGKAKLGEAVAVFGSLQEARTCARGLDSRTVGGKRLEAVVLSSPIEEAR------SLGRNVDLSSGQR-PSHGKPHAVHQPKRESQAGVAQGGQGFVTPPRPEENTEDTFTSEAPSMSCGEGMKSAAAGGLPGATSQAASAGASEPVTALXXXXXXXXXXXXXSKNNGSFAVLRTAERGKRISEKYKHIAALPKHPGSSGWGPKTYETQRPDPEVDNLVFEMLVLLFKFQERARLADPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVDAMAGDVGLDAKVKEVIDAAVECETPIVFALSRRKIGKALGKCVKISVVGVYSFDGANEQQKKLARRMKAIGSSP 1028
            + SP +G  R  P  +G++       MPK          EN+ K GKQRLG +K+KLS+LKK+ILL R  +W            S+   S    C                            KS S  + G       +W + I NL+D+EDVED++D  E+ERDL  M+S FG V  V+VPR         E+S   A  E A V  KV F T  EAE AR G +GR+V G  L                                                                           L R+   + D   CG      PD    W V + NLID EDDL+++++YAE+  + + ++G Y + V V  V   +  +GE + D            + V+ TF S  EAE CV G+ G R+GGKEL   +V   ++  LPS+       EH    ++  ++A              +G    K E G             T    C  +  +T AA      WRVV+R LI+ +DL++DDD YAE  +D  A+ S YG V  L IPR  E   G+C   A+ GEAV VF SLQEA  CARGL  R V G  L+A VL+ P    +      + G    +++ +R P+   P   HQ       G             PE           P M  G G +     G P    + A   + EP                 +           A+ GKRI  KY+  AALPK PG  G  P  Y  Q PD EV++LVFEML LLFKFQERARL+DP KA++RRRLV+GL+EVL+G++A+KVRL+I+APNVDA+ G+ GLD KV E+ID A E E P+VFALS+RKIGKALGK +K+S VGVYSFDGANEQQK+L RRM+ I S P
Sbjct:   59 QSSPSSGTRRSGPYAQGRA-------MPKN---------ENIPKPGKQRLGPRKKKLSTLKKKILLDRLERWRDKQHEGALSTPSATASSEEAKCNNPFPLCPPGELSPPPSPPATICPAVVDKSTSYGQVGGANGERSVWAITIYNLVDQEDVEDDDDHAEIERDLWDMSSAFGVVRSVQVPRGTAVQVSDAEVSAAAAAGEPAAVAAKVAFATNAEAECARDGLNGRIVGGKPL---------------------------------------------------------------------------LVRIH--RCDGHFCGGVCPGDPDGSGLWRVAIENLIDEEDDLDDEDEYAEISANVSAMMGCYGKLVDVQ-VRRSSPSKGEVQEDVATRAATTAGATQAVVVTFGSLAEAEACVQGIKGCRVGGKELDAHVVLD-SERVLPSNPAFKCDQEHAHSSDVAAAVAG-------------QGDSMMKQEAG-------------TEPSPCVDQ--DTAAAVASSTEWRVVIRGLIDEDDLQDDDDDYAEVCSDVTALVSSYGAVVGLDIPRGRET--GSCCYGAEPGEAVVVFRSLQEAEACARGLSGRKVAGNILDAQVLTQPAPSQQGPLQGGASGTGPPVANRERKPAKECPLPQHQASSHQSCGKV-----------PE------LDGSGPGMLRGFGNRVEDCCGRP----KIACTDSDEPQAIAAAAPPGQSIEGPKTTA--------LAKAGKRIQTKYQEAAALPKPPGVRGGLPNAYVNQPPDKEVNDLVFEMLQLLFKFQERARLSDPSKAKTRRRLVIGLREVLRGVKAKKVRLLIVAPNVDAVGGEGGLDDKVVEIIDKAREAEYPVVFALSKRKIGKALGKTIKVSAVGVYSFDGANEQQKQLKRRMETISSLP 838          
BLAST of mRNA_A-nodosum_M_contig872.20.2 vs. uniprot
Match: A0A6H5LFS5_9PHAE (Ribosomal_L7Ae domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LFS5_9PHAE)

HSP 1 Score: 363 bits (933), Expect = 2.580e-105
Identity = 328/936 (35.04%), Postives = 427/936 (45.62%), Query Frame = 0
Query:  172 EISPPTGNGRGPPLCKGKSAGGKTDLMPKRSVHRLPGSGENVRKLGKQRLGQKKRKLSSLKKRILLHRAAQW-------GYEMSSSVGRSSSYSCTEA-------------------------KSISTARAG------QLWVVNIRNLIDEEDVEDEEDRVEVERDLRHMASEFGGVIRVEVPRSLEL--------SGTTAVEVAPV--KVFFPTPEEAERARAGFHGRVVAGNTLEAEVTDELTEREENVDVVTC-GKNGGGVMNTEENRERSDSCSLARGTDAPFSPKGAKVEKVAASAARASAAAQCPNLTRLEDSKKDDRLCGAHIVASPDHPWVVVVRNLIDVEDDLEEDEDYAEVYVDTTEIVGAYSRPVSVNIVSFKNDGEGEGEGD----------QVREVIATFASRGEAEQCVAGLHGRRIGGKELTVELVE------PPADLDLPSDALEHGSIGNIGLSLAHGAAEAPSDTRTTTRGKGTWKMEIGDGSDGGGVGTIAATSAPKCSARLGETTAAHGWRVVVRNLIEHEDLEEDD------DYAESRADFAAMTSEYGHVSALYIPRSEEEAIGACAGKAKLGEAVAVFGSLQEARTCARGLDSRTVGGKRLEAVVLSSPIEEARSLGRNVDLSSGQRPSHGKPHAVHQPKRESQAGVAQGGQGFVTPPRPE--ENTEDTFTSEAPSMSCGEGMKSAAAGGLP-----GATSQAASAGASEPVTALXXXXXXXXXXXXXSKNNGSFAVLRTAERGKRISEKYKHIAALPKHPGSSGWG-PKTYETQRPDPEVDNLVFEMLVLLFKFQERARLADPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVDAMAGDVGLDAKVKEVIDAAVECETPIVFALSRRKIGKALGKCVKISVVGVYSFDGANEQQKKLARRMKAIGSSP 1028
            + SP  G  R  P  +G++       MPK           N+ K GKQRLG  K+KLS+LKK+ILL R  +W       G    S+   S    C+                           KS S  + G       +W + I NL+DEEDVED++D  E+ERDL  M+S FG V  V+VPR   +        +  TA E A V  KV F T  EAE AR   +GR+V G  L       L  R        C G  GGG+                     P  P G+ +                                           W V + NLID EDDL+++++YAE+  + + ++G Y + V V  V   +  EGE + D            + V+ TF S  EAE CV G+ G R+GGKEL   +V       PP+ + L  D  EH    ++ +++A              +G+   K E G                P C   + +TTA                           DYAE  +D   + S YG V  L IPR  E   G C   A+ GEAV  F SLQEA  CARGL  R V G  L+A VL+ P    +       L  G   S   P  VH+  + ++       Q   TPP  +      +   S  P +  G G       G P      +    A+A A+ P  ++                    A L  A+ GKRI  KY+  AALPK PG SG G P  Y  Q PD E ++LVFEML LLFKFQERARL+DP KA++RRRLV+GL+EVL+G++A+KVRL+I+APNVDA+ G+ GLD KV E+ID A E ETP+VFALS+RKIGKALGK +K+S VGVYSFDGANEQQK+L RRM+ I S P
Sbjct:  245 QSSPSRGTRRSGPYAQGRA-------MPKNG---------NIPKPGKQRLGPHKKKLSTLKKKILLDRLERWRDKQHGGGLSNPSATAASEEAKCSNLFPLCPPGGLSPPPSPPATICPAVVDKSTSYGQVGGGIGERNVWAITIYNLVDEEDVEDDDDHAEIERDLWDMSSAFGVVRSVQVPRGTTVQVSDAQVSAAATAGEPAAVAAKVAFATNAEAECARDELNGRIVGGKPL-------LVRRHR------CDGDFGGGIC--------------------PGDPDGSGL-------------------------------------------WRVAIENLIDEEDDLDDEDEYAEISANVSTMMGCYGKLVDVQ-VRRSSPSEGEAQEDVATRAATTAGATQAVVVTFGSLAEAEACVQGIKGCRVGGKELDAHVVHDSERVLPPSPV-LKCDDQEHARQSDVAIAVAG-------------QGESAMKKEAG-------------MERPPC---VDQTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXDYAEVCSDVTGLVSSYGAVVGLDIPRGRET--GICCYGAEPGEAVVAFRSLQEAEACARGLSGRKVAGNILDAQVLTQPTPSQQGT-----LQGGA--SGTDPPVVHREWKPAKGCTLPQQQSMATPPSHQLCGKVAELHVS-GPGLLGGIGNSGEDDRGRPKISFTDSDEPQATAAAAPPAHSI---------------EGPKTAAL--AKAGKRIPMKYQEAAALPKPPGISGGGSPNAYVHQPPDKEANDLVFEMLQLLFKFQERARLSDPAKAKTRRRLVIGLREVLRGVKAKKVRLLIVAPNVDAVGGEGGLDDKVVEIIDKAREEETPVVFALSKRKIGKALGKTIKVSAVGVYSFDGANEQQKQLKRRMETISSLP 1030          
BLAST of mRNA_A-nodosum_M_contig872.20.2 vs. uniprot
Match: A0A7S2BNP8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNP8_9STRA)

HSP 1 Score: 131 bits (330), Expect = 7.960e-32
Identity = 73/138 (52.90%), Postives = 100/138 (72.46%), Query Frame = 0
Query:  890 QRPDPEVDNLVFEMLVLLFKFQERARLADPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVD--AMAGDVGLDAKVKEVIDAAVECET-PIVFALSRRKIGKALGKCVKISVVGVYSFDGANEQQKKLARRMKAI 1024
            QR D E+D LVFEML  L KFQERAR+ DP KA+ RRRLV GL+EV +G++A KV+ V++APN+D   MAG  GLD  V E+I  A + E   I+FALS++K+GKALGK +++S +G+YS DGA    K + +R++ +
Sbjct:   10 QRLDGELDQLVFEMLGELMKFQERARIQDPTKAKLRRRLVFGLREVKRGIKANKVKCVVVAPNIDEGTMAG--GLDDVVNEIITLARDAEDCHIIFALSKKKMGKALGKHIRVSAIGIYSADGAYPLYKSVLKRLEKM 145          
BLAST of mRNA_A-nodosum_M_contig872.20.2 vs. uniprot
Match: A0A7S2DRG5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DRG5_9STRA)

HSP 1 Score: 131 bits (330), Expect = 2.080e-31
Identity = 75/167 (44.91%), Postives = 110/167 (65.87%), Query Frame = 0
Query:  860 GKRISEKYKHIAALPKHPGSSGWGPKTYETQRP-DPEVDNLVFEMLVLLFKFQERARLADPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVDAMAGDVGLDAKVKEVIDAAVECETP-IVFALSRRKIGKALGKCVKISVVGVYSFDGANEQQKKLARRMKAI 1024
            GKRI +KY     +PK P  +    + Y T +P   E+D LVF ML  L +FQER RL DP K++ RRRLV GL+EV +G+++ KV+ +I+APN+D  +   GL+  V +++  A E ET  ++FALS++K+G AL K VK+S VG+YS DGA +  KK+ + M+ +
Sbjct:   12 GKRIPDKYCSAKQVPKIPNKNPV--REYVTSQPLSAELDKLVFSMLQELMEFQERLRLRDPTKSKLRRRLVFGLREVKRGIKSEKVKCLIVAPNIDEGSIQGGLNDTVNDILTLARERETTTVIFALSKKKLGAALRKSVKVSAVGIYSMDGAFDTYKKILKMMEEL 176          
BLAST of mRNA_A-nodosum_M_contig872.20.2 vs. uniprot
Match: A0A7S1GBK4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GBK4_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.410e-26
Identity = 62/140 (44.29%), Postives = 92/140 (65.71%), Query Frame = 0
Query:  884 PKTYETQRPDPEVDNLVFEMLVLLFKFQERARLADPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVDAMAGDVGLDAKVKEVIDAAVECETPIVFALSRRKIGKALGKCVKISVVGVYSFDGANEQQKKLARRMKA 1023
            P+ Y TQ P P +D LV E L  LF +QER R     KA  R+RL+ GL+EV + +RA KV  ++++PN++      GLD +V  ++  A E E P+VFALSRR++G+ALGK  ++S+VGV S+DG+N  ++ +A   +A
Sbjct:   22 PREYVTQAPSPALDALVTEWLSTLFYYQERLRAQSKAKAAMRKRLLFGLREVDRSMRAGKVLCLVVSPNIEPGTARGGLDDRVGAILARAEENEVPVVFALSRRRLGRALGKSTRVSLVGVLSYDGSNLHRQVMAAAKEA 161          
BLAST of mRNA_A-nodosum_M_contig872.20.2 vs. uniprot
Match: B8CBT9_THAPS (Ribosomal_L7Ae domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBT9_THAPS)

HSP 1 Score: 116 bits (291), Expect = 3.990e-26
Identity = 66/161 (40.99%), Postives = 107/161 (66.46%), Query Frame = 0
Query:  861 KRISEKYKHIAALPKHPGSSGWGPKTYETQRPDPEVDNLVFEMLVLLFKFQERARLADPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVDAMAGDVGLDAKVKEVIDAAVECETPIVFALSRRKIGKALGKCVKISVVGVYSFDGANEQQKKLARRM 1021
            K I E++     +PK P +    P++Y ++  D     L+ EML  L + QER++  D   AR+RRRLVMGL+EV +G+RA KV++V++A N+D       +D+K++E++D A   + PI++ L++R++GKA+GK +K+SVVG+ + DGA+E  KKL R +
Sbjct:   29 KIIPERFAACKRVPKIPNAGI--PRSYASKINDERATPLLVEMLGELMRLQERSK--DDKNARARRRLVMGLREVARGIRAHKVKMVVMANNLDEYGA---IDSKLQEILDMARAEDLPILYELNKRRLGKAIGKSIKVSVVGIQNADGAHEPFKKLKRML 182          
BLAST of mRNA_A-nodosum_M_contig872.20.2 vs. uniprot
Match: A0A7S2S0F1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S0F1_9STRA)

HSP 1 Score: 114 bits (285), Expect = 5.890e-25
Identity = 68/164 (41.46%), Postives = 104/164 (63.41%), Query Frame = 0
Query:  861 KRISEKYKHIAALPKHPGSSGWGPKTYETQRPDPE-VDNLVFEMLVLLFKFQERARLADPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVDAMAGDVGLDAKVKEVIDAAVECETPIVFALSRRKIGKALGKCVKISVVGVYSFDGANEQQKKLARRMKA 1023
            K I EKY     +PK P      P+ Y + R D E V  L+ EML  L + Q R +  D   AR+RRRLVMG +EV +G+R+ K++++I+A N+D       +D+K+++++D A E   P++F +++RKIGKALGK +K+ +VG+ + DGA+E  KKL + M A
Sbjct:   59 KIIPEKYAACKRVPKIPNKGI--PRDYASTRIDDENVVPLICEMLGELMRLQIRNK--DDKNARARRRLVMGFREVARGIRSHKIKMIIMANNLDEYGA---IDSKLQDILDMAKEDNLPVIFEMNKRKIGKALGKTIKVGIVGIQNADGAHEPFKKLKKLMGA 215          
BLAST of mRNA_A-nodosum_M_contig872.20.2 vs. uniprot
Match: A0A1Z5KEV5_FISSO (Ribosomal_L7Ae domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KEV5_FISSO)

HSP 1 Score: 122 bits (305), Expect = 1.540e-24
Identity = 69/158 (43.67%), Postives = 104/158 (65.82%), Query Frame = 0
Query:  861 KRISEKYKHIAALPKHPGSSGWGPKTYETQRPDPEVDNLVFEMLVLLFKFQERARLADPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVDAMAGDVGLDAKVKEVIDAAVECETPIVFALSRRKIGKALGKCVKISVVGVYSFDGANEQQKKLA 1018
            KRI E++     +PK P S    P+ Y     +  V  L+ EML  L + Q+RA  A+   A+++RRLVMGL+EV +G+RARKVR+V++A N+D       LD K++E++D A + E P+ F  S+R +GKA+GK +KI+V+G+ + DGAN+Q KKL+
Sbjct:  649 KRIPERFAECKRVPKIPNSGQ--PRHYAILSKNETVKPLLMEMLAELMRLQKRA--AEDKNAKAKRRLVMGLREVARGIRARKVRMVVMANNLDEYGA---LDEKLQEILDLAQKEEVPVFFEFSKRSLGKAIGKTIKIAVIGIQNPDGANQQFKKLS 799          
BLAST of mRNA_A-nodosum_M_contig872.20.2 vs. uniprot
Match: W4G1D3_9STRA (Ribosomal_L7Ae domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1D3_9STRA)

HSP 1 Score: 120 bits (302), Expect = 2.100e-24
Identity = 74/183 (40.44%), Postives = 111/183 (60.66%), Query Frame = 0
Query:  848 NGSFAVLRTAERGKRISEKYKHIAALPKHPGSSGWGPKTYETQRPDP--EVDNLVFEMLVLLFKFQERARLADPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVDAMAGDVGLDAKVKEVIDAAVECETPIVFALSRRKIGKALGKCVKISVVGVYSFDGANEQQKKLARRMKAIGSSP 1028
            +GS +   T   G ++  +   +  LP     +    + Y  QR D   EV+ LV   L  L   QERARL +P+KA+  RRLV GL+EV +G++  KV  +++A N+D  A + GLD KV E+ID A    TP++F+LS+RK+GKAL K +++S VGVY+ DGANE    L +++ A+ ++P
Sbjct:  458 SGSTSTPTTKGEGGQVLSELPSLQRLP-----NAQAIREYVDQRVDVGGEVEGLVVAFLGRLMSLQERARLTNPLKAKKTRRLVFGLREVKRGVKNGKVVCLMVAYNIDECAAEGGLDDKVMELIDLARLHNTPVIFSLSKRKLGKALLKTIRVSCVGVYNVDGANELWADLKKKVAALQANP 635          
BLAST of mRNA_A-nodosum_M_contig872.20.2 vs. uniprot
Match: A0A401SI99_CHIPU (Ribosomal_L7Ae domain-containing protein (Fragment) n=3 Tax=Chiloscyllium TaxID=34767 RepID=A0A401SI99_CHIPU)

HSP 1 Score: 114 bits (285), Expect = 2.500e-24
Identity = 57/129 (44.19%), Postives = 88/129 (68.22%), Query Frame = 0
Query:  885 KTYETQRPDPEVDNLVFEMLVLLFKFQERARLADPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVDAMAGDVGLDAKVKEVIDAAVECETPIVFALSRRKIGKALGKCVKISVVGVYSFDGANEQ 1013
            + Y +Q    EVDN V ++L  L +FQ+R    DP+KA+ +RR+VMGL+EVLK L+ +K++ VI++PN + +    GLD  +  +I+ A E E P VFAL+R+ +G+ + K V +SVVG++S+DGA  Q
Sbjct:   38 REYCSQVLSKEVDNYVSDLLKELVRFQDRLYQKDPIKAKKKRRIVMGLREVLKHLKLKKLKCVIISPNCERIQSKGGLDETLHTIIEVAREQEIPFVFALNRKALGRCVNKAVPVSVVGIFSYDGAENQ 166          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig872.20.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDS8_ECTSI5.360e-11535.44SECIS binding protein 2 n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LFS5_9PHAE2.580e-10535.04Ribosomal_L7Ae domain-containing protein n=1 Tax=E... [more]
A0A7S2BNP8_9STRA7.960e-3252.90Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2DRG5_9STRA2.080e-3144.91Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1GBK4_9STRA1.410e-2644.29Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
B8CBT9_THAPS3.990e-2640.99Ribosomal_L7Ae domain-containing protein n=1 Tax=T... [more]
A0A7S2S0F1_9STRA5.890e-2541.46Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1Z5KEV5_FISSO1.540e-2443.67Ribosomal_L7Ae domain-containing protein n=1 Tax=F... [more]
W4G1D3_9STRA2.100e-2440.44Ribosomal_L7Ae domain-containing protein n=3 Tax=A... [more]
A0A401SI99_CHIPU2.500e-2444.19Ribosomal_L7Ae domain-containing protein (Fragment... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 920..1016
e-value: 1.0E-17
score: 65.4
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 921..1023
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 458..557
e-value: 1.4E-9
score: 39.8
coord: 636..732
e-value: 6.5E-9
score: 37.7
coord: 272..369
e-value: 6.8E-13
score: 50.5
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 921..1006
e-value: 3.4E-11
score: 42.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1018..1041
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 739..805
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..110
IPR040051Selenocysteine insertion sequence-binding protein 2PANTHERPTHR13284GH01354Pcoord: 887..1024
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 296..364
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 522..726

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig872contigA-nodosum_M_contig872:293289..299238 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig872.20.2mRNA_A-nodosum_M_contig872.20.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig872 292768..299672 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig872.20.2 ID=prot_A-nodosum_M_contig872.20.2|Name=mRNA_A-nodosum_M_contig872.20.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1042bp
MDRGTRGTGCRSDGNEASCHRNGLMGGVKASSTRVGSGTEIVGGNHDRRE
IRECRTGIQHGSEPRQNGGTGTPSANRGRRHPIKLEPSKAHGEAPRHKMG
NARGLGRNAPPSAPRREYTLFDHLLMSNSKFGIIPTQTTNEDPKGKCDAR
TRQSSASGASPSAAANDWYSQEISPPTGNGRGPPLCKGKSAGGKTDLMPK
RSVHRLPGSGENVRKLGKQRLGQKKRKLSSLKKRILLHRAAQWGYEMSSS
VGRSSSYSCTEAKSISTARAGQLWVVNIRNLIDEEDVEDEEDRVEVERDL
RHMASEFGGVIRVEVPRSLELSGTTAVEVAPVKVFFPTPEEAERARAGFH
GRVVAGNTLEAEVTDELTEREENVDVVTCGKNGGGVMNTEENRERSDSCS
LARGTDAPFSPKGAKVEKVAASAARASAAAQCPNLTRLEDSKKDDRLCGA
HIVASPDHPWVVVVRNLIDVEDDLEEDEDYAEVYVDTTEIVGAYSRPVSV
NIVSFKNDGEGEGEGDQVREVIATFASRGEAEQCVAGLHGRRIGGKELTV
ELVEPPADLDLPSDALEHGSIGNIGLSLAHGAAEAPSDTRTTTRGKGTWK
MEIGDGSDGGGVGTIAATSAPKCSARLGETTAAHGWRVVVRNLIEHEDLE
EDDDYAESRADFAAMTSEYGHVSALYIPRSEEEAIGACAGKAKLGEAVAV
FGSLQEARTCARGLDSRTVGGKRLEAVVLSSPIEEARSLGRNVDLSSGQR
PSHGKPHAVHQPKRESQAGVAQGGQGFVTPPRPEENTEDTFTSEAPSMSC
GEGMKSAAAGGLPGATSQAASAGASEPVTALVAAAASAATTNASSKNNGS
FAVLRTAERGKRISEKYKHIAALPKHPGSSGWGPKTYETQRPDPEVDNLV
FEMLVLLFKFQERARLADPVKARSRRRLVMGLKEVLKGLRARKVRLVILA
PNVDAMAGDVGLDAKVKEVIDAAVECETPIVFALSRRKIGKALGKCVKIS
VVGVYSFDGANEQQKKLARRMKAIGSSPQEQEPASEADTTN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029064L30e-like
IPR012677Nucleotide-bd_a/b_plait_sf
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR040051SECISBP2
IPR035979RBD_domain_sf