prot_A-nodosum_M_contig871.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig871.4.1
Unique Nameprot_A-nodosum_M_contig871.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length168
Homology
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BLAST of mRNA_A-nodosum_M_contig871.4.1 vs. uniprot
Match: A0A6H5JMT1_9PHAE (PK_Tyr_Ser-Thr domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMT1_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 1.590e-13
Identity = 51/139 (36.69%), Postives = 76/139 (54.68%), Query Frame = 0 
Query:   31 TTSSTFG-FCFDQIQECQLDTECAQCLLDWGPDNSDSSTCVEEYATLSTTSSTATDTCASRGASYCCFFVSGTANSCMESAVMIDYWSCIQEANECTLDDMPCYGSSFVEDTGGTTRDG-VGTLSGALLATVAAAILAV 167
            T+SS+F  FC ++ Q C+ D EC  CLL W    +D++TC +       T      TC   G ++CC F  GTA SCME+A++  +W+C      C+L DMPC   + V  +      G + ++ GA  A +AAA++AV
Sbjct:  326 TSSSSFSSFCMEETQACEADEECYACLLSWPA--TDATTCTDYSLEGGET------TCEENGIAHCCGFEEGTAESCMENALLEAFWTCTLADVGCSLGDMPCSTVAVVAVSSAAPSIGPLSSMYGAPGAALAAAVVAV 456
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig871.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JMT1_9PHAE1.590e-1336.69PK_Tyr_Ser-Thr domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig871contigA-nodosum_M_contig871:166390..167227 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig871.4.1mRNA_A-nodosum_M_contig871.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig871 142497..167453 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig871.4.1 ID=prot_A-nodosum_M_contig871.4.1|Name=mRNA_A-nodosum_M_contig871.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=168bp
MAFLGIRSVNLAANAVILLLLAAFQVPIAHTTSSTFGFCFDQIQECQLDT
ECAQCLLDWGPDNSDSSTCVEEYATLSTTSSTATDTCASRGASYCCFFVS
GTANSCMESAVMIDYWSCIQEANECTLDDMPCYGSSFVEDTGGTTRDGVG
TLSGALLATVAAAILAV*
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