prot_A-nodosum_M_contig871.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig871.1.1
Unique Nameprot_A-nodosum_M_contig871.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length496
Homology
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 711 bits (1836), Expect = 4.150e-254
Identity = 353/487 (72.48%), Postives = 405/487 (83.16%), Query Frame = 0
Query:   11 AAAANTPSPNDAISKPECNSTNPISIRYAGTTARLYLESANSSTRGGCITLGDIWTERTGKAPLYAVDPVNHTISEESTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDANTFINLRAHGGSLDFLSTKVISWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGIIASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTKYNVYTYEGSDDPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNVF----VNTTTLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 493
            AAAA+T SPND ISKP+C+S   +SIRYAGTT RLYLESA+  TRGGC TLG IW  R GKAPLYAVDP +  +SE  TGTWLLTE+LYVEDGITL+V+G+  GGD+DELRLLS + T+INLRAHGGSLDF+ TKV SWD STNSPD + TDGRSYISAVSE++ +  ETC+G AK+ MGEARMDIE+SE+GYLGF DSESYGLTWKVRGFC +K+NPEIFD+VNVYGN+Y SDIHH  +G+YT+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VYNN  HGIIASKRCN VSIQGNEVYGG ETSAGIFLHRSSD+A VKGNYVHDNGDAG+A LESFNA VS NTFENNKYGVR SVG AD+ F++N I NN+KYN YTY GSD+PDVV SGR QNNVFS N   GA+E IK+KE+D  QFLDNVF     +   +RF+D+   VM GN+GLD  + ELKV+N +CFDG SDSG+EPVC
Sbjct:   26 AAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512          
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 685 bits (1768), Expect = 7.850e-244
Identity = 337/465 (72.47%), Postives = 388/465 (83.44%), Query Frame = 0
Query:   34 ISIRYAGTTARLYLESA-NSSTRGGCITLGDIWTERTGKAPLYAVDPVNHTISEESTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDANTFINLRAHGGSLDFLSTKVISWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGIIASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTKYNVYTYEGSDDPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNVF----VNTTTLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 493
            +SIRYAGTTARLYLESA N +TRGGC+TLG IW  R GK PLYAVDP +  +S  +TGTWLLTE+LYVEDGITL+V+GS  GGD+DELRLLS   TFINLRAHGGSLDF+STKV SWD STNSPD + TDGRSYISA+SE+I +  ETC+G AK+ MGEARMDIE SE+GYLG+ DSESYGLTWKVRGFC +K+NPE+FD+VNVYGN+Y SDIHH  +G+YT+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VYNN  HGIIASKRCN VSIQGNEVYGG ETSAGIFLHRSSD+A VKGNYVHDNGDAG+A LESFNA VS NTFENNKYGVRFSVG AD+ F++N I NN +YN Y+Y G+D+PDVV SGR QNNVFS N   GA+E IK+KE+D  QFLDNVF     +   +RF+++T  +M GN+GLD  E ELKV N ACFDG +DSG+EPVC
Sbjct:   44 VSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 508          
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 631 bits (1628), Expect = 4.220e-223
Identity = 309/468 (66.03%), Postives = 377/468 (80.56%), Query Frame = 0
Query:   25 KPECNSTNPISIRYAGTTARLYLESANSSTRGGCITLGDIWTERTGKAPLYAVDPVNHTISEESTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDANTFINLRAHGGSLDFLSTKVISWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGIIASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTKYNVYTYEGSDDPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNVFVNTTTLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPV 492
            KP+C+S+  +S+RY   +ARLY+ESAN  TRGGC+TL  IW ++   +PLYAVDP +  +S  +TGTWLLTE++YVEDGITLQVHG S GGD+DELRLLS ++TFI+LRA+GGSLDFLSTKV +WD S N+PD + +DGRSYISAVSE+I +  +TC+GRAK++MGEARMDIE+SEM YLG+  +E+YGLTWKVRGFC +K NPE+FD+VNVYGNIY SDIHHN +GVYT+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN V+NN  HGIIASKRCN VSIQGNEVYGG   SAGIFLHRSSDN  VKGNYVHDNGDAG+A LESFNA VS+NTFENNKYGVR SVG   + F+ N I  + ++N ++Y G+D P+VV+SGR Q+NVF  N I+G  E+I LKE+D  QF+DN F +   +RF D+T  +M GN+G  L +  LKV  GA FD SSD GFEP+
Sbjct:    7 KPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTG--LADSTLKVDRGATFDESSDHGFEPI 472          
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 627 bits (1616), Expect = 7.170e-221
Identity = 314/485 (64.74%), Postives = 382/485 (78.76%), Query Frame = 0
Query:    8 LVLAAAANTPSPNDAISKPECNSTNPISIRYAGTTARLYLESANSSTRGGCITLGDIWTERTGKAPLYAVDPVNHTISEESTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDANTFINLRAHGGSLDFLSTKVISWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGIIASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTKYNVYTYEGSDDPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNVFVNTTTLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPV 492
            L LAA  +T SPN+ I KPEC+ +  +SIRY+    RLYLESA+S TRGGC+TL  IW  + G+APLYAVD  +  IS+ +TGTWLLTE+L+VEDGITL+VHG+S GGD+DELRLLS ++TFINLRAHGGSLDFLSTKV +WD S N PD +  DGRSY+SAVSE+I + S+TC+GRAK++MGEARMDIEDSEMGYLG+  SESYGLTWKVRGFC +K+N ++F++VNVYGNIY SDIHHN +GVYT+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VY+N  HGIIASKRCN VSIQGNEVYGG  +SAGIFLHR                DAG+A +ESFNA VS+N FENNKYG+RFSVGS  + F +N I  +T+Y+ Y+Y GSD PDVV+SGR Q+NVF  N I+G  E+IKL ++D  QF+DN F + TT+RFND+   +M GN GL++ +  LKV NGA FD SSD GFEP+
Sbjct:   16 LKLAAGKDTKSPNEPIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIGLNMSK--LKVVNGASFDASSDYGFEPI 498          
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 605 bits (1559), Expect = 3.260e-212
Identity = 304/481 (63.20%), Postives = 359/481 (74.64%), Query Frame = 0
Query:   13 AANTPSPNDAISKPECNSTNPISIRYAGTTARLYLESANSSTRGGCITLGDIWTERTGKAPLYAVDPVNHTISEESTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDANTFINLRAHGGSLDFLSTKVISWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGIIASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTKYNVYTYEGSDDPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNVFVNTTTLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 493
            AANT S N AI+KP C S+  +SIRY+ T+ RLYLESA+ +TRGGC+TL DIW +  G APLYAV P +  +S   TGTWLLTE LYVEDGITLQVHG S GG +DELRLLS +  FINLRAHGGSLDF+STKV +WD S N    + + GRSYISAVSE+I ++ + CDGRAK +MGEARMDIEDSEM YLG+  SESYGLTWKVRG C + +N E+FD VNVYGNIY SDIHHNY+GVYT+GH+QGDWR N M  NT YGFDPHDDSD++TIHDN VYNN NHGIIASKRCN           G   S GIFLHRSSD+A VK NYVHDNGDAGMA +E+FNA VSNN FE+NKYG+R SVG AD+ F+ N I  ++KYNVYTY+GSD P VV+SGR Q+         G  E +KL  +D  +F+DN F +  T+RF D  G +M GNSG  L    LKV++G+CFD  SDS ++PVC
Sbjct:   21 AANTASRNKAIAKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSG--LGGASLKVTDGSCFDKKSDSAYKPVC 499          
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 583 bits (1502), Expect = 1.630e-203
Identity = 301/493 (61.05%), Postives = 357/493 (72.41%), Query Frame = 0
Query:    3 AVGSLLVL--AAAANTPSPNDAISKPECNSTNPISIRYAGTTARLYLESANSSTRGGCITLGDIWTERTGKAPLYAVDPVNHTISEESTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDANTFINLRAHGGSLDFLSTKVISWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGIIASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTKYNVYTYEGSDDPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNVFVNTTTLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 493
            A+ SLL    A AANT S N AISKP C S+  +SIRY+ ++ RLYLESA+  TRGGC+TL +IW +  G APLYAV P +  +S  +TGTWLLTEDLYVEDGITLQVHG+S GG+++ELRLLS +  FINLRAHGGSLDF+STKV +WD S N    + +  RSYISAVSE+I ++ E CDG+AK  MGEARMDIEDSEM YLG+  SESYGLTWKVRGFC + +NPE+FDEVNVYGNIY SDIHHN++GVYT+GH+QGDWR N M  N  YGFDPHDDSD++TIHDN V                          G   S GIFLHRSSD+A VK N    NGDAGMA +ESFNA VSNN FE+NKYGVR SVG AD+ F+ N I +++KYNVYTYEGSDDP VV+SGR Q+N+FS N I G DE+IKL  +D  +F+DN F    T RF D+   +M GN+G  L    LKVS GACFD  SDS ++PVC
Sbjct:   12 AIVSLLAARGADAANTSSKNKAISKPSCKSSTKVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTG--LGSATLKVSKGACFDKKSDSDYKPVC 502          
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 577 bits (1486), Expect = 1.020e-199
Identity = 291/480 (60.62%), Postives = 362/480 (75.42%), Query Frame = 0
Query:   15 NTPSPNDAISKPECNSTNPISIRYAGTTARLYLESANSSTRGGCITLGDIWTERTG------KAPLYAVDPVNHTISEESTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDA-------NTFINLRAHGGSLDFLSTKVISWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGIIASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTKYNVYTYEGSDDPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNVFVNTTTLRFNDSTGVVMIGNSGLDLDEVELKVSNGACF 481
            +TPSPN  I KPECNST  +SIRY+ TT RLYLE+     RGGC+T+  IW  R G      KAPLYAVDPV+   S+  TGTWLL EDLYVEDGITL+V G+  GG +DELRL S          T+INLRAHGGSLDF  TKV  WD + NS D++ TDGRSYISAVSE++++ ++TC+G AK+ MGEARMDI +SEMGY+GF DSESYGLTWKVRGFC +K+NPE+FD+VNVYGNIY S++HH  + VYT+GHQQGDWR NT+  N+GYG+DPHDDSD++TIHDNVVY+N  HGIIASKRCN+VSIQGN VYGG +TSAGIFLHRSSD A VK N+ + NGDAGMA LES NA +S N FE NKYG+R SVG  D++ ++N + N ++Y +YTY+GSD  +V  +GR Q+N+F  N +VG  +AIKLKESD  +  +NVF     + F+++T  V+ GN GL+ D  E+++   ACF
Sbjct:  102 DTPSPNTPIPKPECNSTQAVSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLE-DATEVELVEPACF 580          
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 561 bits (1445), Expect = 2.150e-196
Identity = 273/360 (75.83%), Postives = 310/360 (86.11%), Query Frame = 0
Query:   34 ISIRYAGTTARLYLESA-NSSTRGGCITLGDIWTERTGKAPLYAVDPVNHTISEESTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDANTFINLRAHGGSLDFLSTKVISWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGIIASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTK 392
            +SIRYA +TARLYLESA N +TRGGC+TLG IW  R GK PLYAVDP +  +S  +TGTWLLTE+LYVEDGITL+V+GS  GGD+DELRLLS   TFINLRAHGGSLDF+STKV SWD STNSPD + TDGRSYISA+SE+I +  ETC+G AK+ MGEARMDIE SE+GYLG+ DSESYGLTWKVRGFC +K+NPE+FD+VNVYGN+Y SDIHH  +G+YT+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VYNN  HGIIASKRCN VSIQGNEVYGG ETSAGIFLHRSSD+A VKGNYVHDNGDAG+A LESFNA VS NTFENNKYGVRFSVG AD+ F++N I NN +
Sbjct:   44 VSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403          
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 437 bits (1125), Expect = 8.710e-149
Identity = 211/288 (73.26%), Postives = 244/288 (84.72%), Query Frame = 0
Query:   11 AAAANTPSPNDAISKPECNSTNPISIRYAGTTARLYLESANSSTRGGCITLGDIWTERTGKAPLYAVDPVNHTISEESTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDANTFINLRAHGGSLDFLSTKVISWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHG 298
            AAAA+T SPND ISKP+C+S   +SIRYA +T RLYLESA+  TRGGC+TLG IW  R GKAPLYAVDP +   SE  TGTWLLTE+LYVEDGITL+V+G+  GGD+DELRLLS  +T+INLRAHGGSLDF+ TKV SWD STNSPD + TDGRSYISA+SE+I +  ETC+G AK+ MGEARMDIE+SE+GYLGF DSESYGLTWKVRGFC +K+NP IFDEVNVYGN+Y SDIHH  +G+YT+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VYNN NHG
Sbjct:   25 AAAADTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGNHG 312          
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE)

HSP 1 Score: 424 bits (1091), Expect = 6.770e-144
Identity = 208/322 (64.60%), Postives = 246/322 (76.40%), Query Frame = 0
Query:  172 ELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGIIASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTKYNVYTYEGSDDPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNVFVNTTTLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 493
            E+I ++ E C+G+AK  MGEARMDIEDSEM YLG+  SESYGLTWKVRGFC + +NPE+FDEVNVYGNIY SDIHHN++GVYT+GH+QGDWR N M  N  YGFDPHDDSD++TIHDN VYNN NHGIIASKRCN           G   S GIFLHRSSD+A VK NY  DNGDAGMA +ESFNA VSNN FE+NKYGVR SVG AD+ F+ N I ++++YNVYTYEGSDDP VV+SGR Q+N+FS N I G DE+IKL  +D  +F+DN F +  T+RF D+   +M GN+G  L    LKVS GACFD  SDS ++PVC
Sbjct:    6 EIITDSKEKCNGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKSAKTVRFEDAQDTIMSGNTG--LGSATLKVSKGACFDKKSDSDYKPVC 325          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXE4_ECTSI4.150e-25472.48Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI7.850e-24472.47Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
Q7XAJ8_9PHAE4.220e-22366.03Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
Q7XAJ7_9PHAE7.170e-22164.74Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
A8CEP1_SACJA3.260e-21263.20Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
Q7XAK2_9PHAE1.630e-20361.05Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
D8LD45_ECTSI1.020e-19960.63Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FXE5_ECTSI2.150e-19675.83Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JU98_9PHAE8.710e-14973.26MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
Q7XAJ9_9PHAE6.770e-14464.60Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 305..329
e-value: 37.0
score: 13.2
coord: 412..433
e-value: 1800.0
score: 5.4
coord: 281..303
e-value: 7.4
score: 15.5
coord: 354..375
e-value: 0.31
score: 20.1
coord: 377..399
e-value: 1400.0
score: 6.1
coord: 257..279
e-value: 6100.0
score: 1.6
coord: 434..462
e-value: 6200.0
score: 1.6
coord: 331..353
e-value: 5.3
score: 16.0
coord: 235..256
e-value: 1100.0
score: 7.0
IPR007742Periplasmic copper-binding protein NosD, beta helix domainPFAMPF05048NosDcoord: 233..364
e-value: 1.2E-13
score: 51.0
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 36..412
e-value: 1.0E-97
score: 329.6
IPR022441Parallel beta-helix repeat-2TIGRFAMTIGR03804TIGR03804coord: 324..369
e-value: 3.6E-8
score: 31.0
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 90..448

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig871contigA-nodosum_M_contig871:56686..61939 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig871.1.1mRNA_A-nodosum_M_contig871.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig871 56668..61939 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig871.1.1 ID=prot_A-nodosum_M_contig871.1.1|Name=mRNA_A-nodosum_M_contig871.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=496bp
MLAVGSLLVLAAAANTPSPNDAISKPECNSTNPISIRYAGTTARLYLESA
NSSTRGGCITLGDIWTERTGKAPLYAVDPVNHTISEESTGTWLLTEDLYV
EDGITLQVHGSSVGGDSDELRLLSDANTFINLRAHGGSLDFLSTKVISWD
NSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSE
MGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYY
GVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGII
ASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMA
FLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTKYNVYTYEG
SDDPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNVFVNTTTL
RFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVCDE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR007742NosD_dom
IPR012334Pectin_lyas_fold
IPR022441Para_beta_helix_rpt-2
IPR011050Pectin_lyase_fold/virulence