mRNA_A-nodosum_M_contig871.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 713 bits (1840), Expect = 1.290e-254 Identity = 357/503 (70.97%), Postives = 413/503 (82.11%), Query Frame = 1
Query: 1 SSFKRSMLAVGSLLVLAAAANTPSPNDAISKPECNSTNPISIRYAGTTARLYLESANSSTRGGCITLGDIWTERTGKAPLYAVDPVNHTISEESTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDANTFINLRAHGGSLDFLSTKVISWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGIIASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTKYNVYTYEGSDDPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNVF----VNTTTLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 1497
SSF ++L + + AAAA+T SPND ISKP+C+S +SIRYAGTT RLYLESA+ TRGGC TLG IW R GKAPLYAVDP + +SE TGTWLLTE+LYVEDGITL+V+G+ GGD+DELRLLS + T+INLRAHGGSLDF+ TKV SWD STNSPD + TDGRSYISAVSE++ + ETC+G AK+ MGEARMDIE+SE+GYLGF DSESYGLTWKVRGFC +K+NPEIFD+VNVYGN+Y SDIHH +G+YT+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VYNN HGIIASKRCN VSIQGNEVYGG ETSAGIFLHRSSD+A VKGNYVHDNGDAG+A LESFNA VS NTFENNKYGVR SVG AD+ F++N I NN+KYN YTY GSD+PDVV SGR QNNVFS N GA+E IK+KE+D QFLDNVF + +RF+D+ VM GN+GLD + ELKV+N +CFDG SDSG+EPVC
Sbjct: 10 SSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 685 bits (1768), Expect = 9.890e-244 Identity = 337/465 (72.47%), Postives = 388/465 (83.44%), Query Frame = 1
Query: 118 ISIRYAGTTARLYLESA-NSSTRGGCITLGDIWTERTGKAPLYAVDPVNHTISEESTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDANTFINLRAHGGSLDFLSTKVISWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGIIASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTKYNVYTYEGSDDPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNVF----VNTTTLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 1497
+SIRYAGTTARLYLESA N +TRGGC+TLG IW R GK PLYAVDP + +S +TGTWLLTE+LYVEDGITL+V+GS GGD+DELRLLS TFINLRAHGGSLDF+STKV SWD STNSPD + TDGRSYISA+SE+I + ETC+G AK+ MGEARMDIE SE+GYLG+ DSESYGLTWKVRGFC +K+NPE+FD+VNVYGN+Y SDIHH +G+YT+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VYNN HGIIASKRCN VSIQGNEVYGG ETSAGIFLHRSSD+A VKGNYVHDNGDAG+A LESFNA VS NTFENNKYGVRFSVG AD+ F++N I NN +YN Y+Y G+D+PDVV SGR QNNVFS N GA+E IK+KE+D QFLDNVF + +RF+++T +M GN+GLD E ELKV N ACFDG +DSG+EPVC
Sbjct: 44 VSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 508
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 631 bits (1628), Expect = 5.300e-223 Identity = 309/468 (66.03%), Postives = 377/468 (80.56%), Query Frame = 1
Query: 91 KPECNSTNPISIRYAGTTARLYLESANSSTRGGCITLGDIWTERTGKAPLYAVDPVNHTISEESTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDANTFINLRAHGGSLDFLSTKVISWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGIIASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTKYNVYTYEGSDDPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNVFVNTTTLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPV 1494
KP+C+S+ +S+RY +ARLY+ESAN TRGGC+TL IW ++ +PLYAVDP + +S +TGTWLLTE++YVEDGITLQVHG S GGD+DELRLLS ++TFI+LRA+GGSLDFLSTKV +WD S N+PD + +DGRSYISAVSE+I + +TC+GRAK++MGEARMDIE+SEM YLG+ +E+YGLTWKVRGFC +K NPE+FD+VNVYGNIY SDIHHN +GVYT+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN V+NN HGIIASKRCN VSIQGNEVYGG SAGIFLHRSSDN VKGNYVHDNGDAG+A LESFNA VS+NTFENNKYGVR SVG + F+ N I + ++N ++Y G+D P+VV+SGR Q+NVF N I+G E+I LKE+D QF+DN F + +RF D+T +M GN+G L + LKV GA FD SSD GFEP+
Sbjct: 7 KPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTG--LADSTLKVDRGATFDESSDHGFEPI 472
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 627 bits (1616), Expect = 8.990e-221 Identity = 314/485 (64.74%), Postives = 382/485 (78.76%), Query Frame = 1
Query: 40 LVLAAAANTPSPNDAISKPECNSTNPISIRYAGTTARLYLESANSSTRGGCITLGDIWTERTGKAPLYAVDPVNHTISEESTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDANTFINLRAHGGSLDFLSTKVISWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGIIASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTKYNVYTYEGSDDPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNVFVNTTTLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPV 1494
L LAA +T SPN+ I KPEC+ + +SIRY+ RLYLESA+S TRGGC+TL IW + G+APLYAVD + IS+ +TGTWLLTE+L+VEDGITL+VHG+S GGD+DELRLLS ++TFINLRAHGGSLDFLSTKV +WD S N PD + DGRSY+SAVSE+I + S+TC+GRAK++MGEARMDIEDSEMGYLG+ SESYGLTWKVRGFC +K+N ++F++VNVYGNIY SDIHHN +GVYT+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VY+N HGIIASKRCN VSIQGNEVYGG +SAGIFLHR DAG+A +ESFNA VS+N FENNKYG+RFSVGS + F +N I +T+Y+ Y+Y GSD PDVV+SGR Q+NVF N I+G E+IKL ++D QF+DN F + TT+RFND+ +M GN GL++ + LKV NGA FD SSD GFEP+
Sbjct: 16 LKLAAGKDTKSPNEPIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIGLNMSK--LKVVNGASFDASSDYGFEPI 498
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 605 bits (1559), Expect = 4.080e-212 Identity = 304/481 (63.20%), Postives = 359/481 (74.64%), Query Frame = 1
Query: 55 AANTPSPNDAISKPECNSTNPISIRYAGTTARLYLESANSSTRGGCITLGDIWTERTGKAPLYAVDPVNHTISEESTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDANTFINLRAHGGSLDFLSTKVISWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGIIASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTKYNVYTYEGSDDPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNVFVNTTTLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 1497
AANT S N AI+KP C S+ +SIRY+ T+ RLYLESA+ +TRGGC+TL DIW + G APLYAV P + +S TGTWLLTE LYVEDGITLQVHG S GG +DELRLLS + FINLRAHGGSLDF+STKV +WD S N + + GRSYISAVSE+I ++ + CDGRAK +MGEARMDIEDSEM YLG+ SESYGLTWKVRG C + +N E+FD VNVYGNIY SDIHHNY+GVYT+GH+QGDWR N M NT YGFDPHDDSD++TIHDN VYNN NHGIIASKRCN G S GIFLHRSSD+A VK NYVHDNGDAGMA +E+FNA VSNN FE+NKYG+R SVG AD+ F+ N I ++KYNVYTY+GSD P VV+SGR Q+ G E +KL +D +F+DN F + T+RF D G +M GNSG L LKV++G+CFD SDS ++PVC
Sbjct: 21 AANTASRNKAIAKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSG--LGGASLKVTDGSCFDKKSDSAYKPVC 499
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 582 bits (1501), Expect = 2.900e-203 Identity = 296/481 (61.54%), Postives = 351/481 (72.97%), Query Frame = 1
Query: 55 AANTPSPNDAISKPECNSTNPISIRYAGTTARLYLESANSSTRGGCITLGDIWTERTGKAPLYAVDPVNHTISEESTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDANTFINLRAHGGSLDFLSTKVISWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGIIASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTKYNVYTYEGSDDPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNVFVNTTTLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 1497
AANT S N AISKP C S+ +SIRY+ ++ RLYLESA+ TRGGC+TL +IW + G APLYAV P + +S +TGTWLLTEDLYVEDGITLQVHG+S GG+++ELRLLS + FINLRAHGGSLDF+STKV +WD S N + + RSYISAVSE+I ++ E CDG+AK MGEARMDIEDSEM YLG+ SESYGLTWKVRGFC + +NPE+FDEVNVYGNIY SDIHHN++GVYT+GH+QGDWR N M N YGFDPHDDSD++TIHDN V G S GIFLHRSSD+A VK N NGDAGMA +ESFNA VSNN FE+NKYGVR SVG AD+ F+ N I +++KYNVYTYEGSDDP VV+SGR Q+N+FS N I G DE+IKL +D +F+DN F T RF D+ +M GN+G L LKVS GACFD SDS ++PVC
Sbjct: 24 AANTSSKNKAISKPSCKSSTKVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTG--LGSATLKVSKGACFDKKSDSDYKPVC 502
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI) HSP 1 Score: 577 bits (1486), Expect = 1.280e-199 Identity = 291/480 (60.62%), Postives = 362/480 (75.42%), Query Frame = 1
Query: 61 NTPSPNDAISKPECNSTNPISIRYAGTTARLYLESANSSTRGGCITLGDIWTERTG------KAPLYAVDPVNHTISEESTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDA-------NTFINLRAHGGSLDFLSTKVISWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGIIASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTKYNVYTYEGSDDPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNVFVNTTTLRFNDSTGVVMIGNSGLDLDEVELKVSNGACF 1461
+TPSPN I KPECNST +SIRY+ TT RLYLE+ RGGC+T+ IW R G KAPLYAVDPV+ S+ TGTWLL EDLYVEDGITL+V G+ GG +DELRL S T+INLRAHGGSLDF TKV WD + NS D++ TDGRSYISAVSE++++ ++TC+G AK+ MGEARMDI +SEMGY+GF DSESYGLTWKVRGFC +K+NPE+FD+VNVYGNIY S++HH + VYT+GHQQGDWR NT+ N+GYG+DPHDDSD++TIHDNVVY+N HGIIASKRCN+VSIQGN VYGG +TSAGIFLHRSSD A VK N+ + NGDAGMA LES NA +S N FE NKYG+R SVG D++ ++N + N ++Y +YTY+GSD +V +GR Q+N+F N +VG +AIKLKESD + +NVF + F+++T V+ GN GL+ D E+++ ACF
Sbjct: 102 DTPSPNTPIPKPECNSTQAVSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLE-DATEVELVEPACF 580
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI) HSP 1 Score: 561 bits (1445), Expect = 2.680e-196 Identity = 273/360 (75.83%), Postives = 310/360 (86.11%), Query Frame = 1
Query: 118 ISIRYAGTTARLYLESA-NSSTRGGCITLGDIWTERTGKAPLYAVDPVNHTISEESTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDANTFINLRAHGGSLDFLSTKVISWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGIIASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTK 1194
+SIRYA +TARLYLESA N +TRGGC+TLG IW R GK PLYAVDP + +S +TGTWLLTE+LYVEDGITL+V+GS GGD+DELRLLS TFINLRAHGGSLDF+STKV SWD STNSPD + TDGRSYISA+SE+I + ETC+G AK+ MGEARMDIE SE+GYLG+ DSESYGLTWKVRGFC +K+NPE+FD+VNVYGN+Y SDIHH +G+YT+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VYNN HGIIASKRCN VSIQGNEVYGG ETSAGIFLHRSSD+A VKGNYVHDNGDAG+A LESFNA VS NTFENNKYGVRFSVG AD+ F++N I NN +
Sbjct: 44 VSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE) HSP 1 Score: 440 bits (1131), Expect = 1.320e-149 Identity = 215/304 (70.72%), Postives = 253/304 (83.22%), Query Frame = 1
Query: 1 SSFKRSMLAVGSLLVLAAAANTPSPNDAISKPECNSTNPISIRYAGTTARLYLESANSSTRGGCITLGDIWTERTGKAPLYAVDPVNHTISEESTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDANTFINLRAHGGSLDFLSTKVISWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHG 912
SSF ++L + + + AAAA+T SPND ISKP+C+S +SIRYA +T RLYLESA+ TRGGC+TLG IW R GKAPLYAVDP + SE TGTWLLTE+LYVEDGITL+V+G+ GGD+DELRLLS +T+INLRAHGGSLDF+ TKV SWD STNSPD + TDGRSYISA+SE+I + ETC+G AK+ MGEARMDIE+SE+GYLGF DSESYGLTWKVRGFC +K+NP IFDEVNVYGN+Y SDIHH +G+YT+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VYNN NHG
Sbjct: 9 SSFCLALLGLLAATMRAAAADTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGNHG 312
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE) HSP 1 Score: 424 bits (1091), Expect = 8.330e-144 Identity = 208/322 (64.60%), Postives = 246/322 (76.40%), Query Frame = 1
Query: 532 ELIVNASETCDGRAKSDMGEARMDIEDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNVNHGIIASKRCNDVSIQGNEVYGGGETSAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGSADSYFTDNAILNNTKYNVYTYEGSDDPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNVFVNTTTLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 1497
E+I ++ E C+G+AK MGEARMDIEDSEM YLG+ SESYGLTWKVRGFC + +NPE+FDEVNVYGNIY SDIHHN++GVYT+GH+QGDWR N M N YGFDPHDDSD++TIHDN VYNN NHGIIASKRCN G S GIFLHRSSD+A VK NY DNGDAGMA +ESFNA VSNN FE+NKYGVR SVG AD+ F+ N I ++++YNVYTYEGSDDP VV+SGR Q+N+FS N I G DE+IKL +D +F+DN F + T+RF D+ +M GN+G L LKVS GACFD SDS ++PVC
Sbjct: 6 EIITDSKEKCNGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKSAKTVRFEDAQDTIMSGNTG--LGSATLKVSKGACFDKKSDSDYKPVC 325 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig871.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig871.1.1 >prot_A-nodosum_M_contig871.1.1 ID=prot_A-nodosum_M_contig871.1.1|Name=mRNA_A-nodosum_M_contig871.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=496bp MLAVGSLLVLAAAANTPSPNDAISKPECNSTNPISIRYAGTTARLYLESAback to top mRNA from alignment at A-nodosum_M_contig871:56668..61939+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig871.1.1 ID=mRNA_A-nodosum_M_contig871.1.1|Name=mRNA_A-nodosum_M_contig871.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5272bp|location=Sequence derived from alignment at A-nodosum_M_contig871:56668..61939+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig871:56668..61939+ >mRNA_A-nodosum_M_contig871.1.1 ID=mRNA_A-nodosum_M_contig871.1.1|Name=mRNA_A-nodosum_M_contig871.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1488bp|location=Sequence derived from alignment at A-nodosum_M_contig871:56668..61939+ (Ascophyllum nodosum dioecious)back to top |