prot_A-nodosum_M_contig8706.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8706.1.1
Unique Nameprot_A-nodosum_M_contig8706.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length90
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig8706.1.1 vs. uniprot
Match: A0A6H5KYI2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYI2_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 6.230e-12
Identity = 41/64 (64.06%), Postives = 46/64 (71.88%), Query Frame = 0 
Query:   30 IVDYLVTLAMLRTK----EKEEEEIGTRRECMRALIGLAESRSTRNMRAMRLLLSATPSGGGAK 89
            +V+ LV L+M R       K EEEIG RRECMRAL+GLAESR  R+M AMRLLLS  PSG GAK
Sbjct:  510 LVESLVVLSMGRVDGSAARKSEEEIGMRRECMRALVGLAESRVVRDMPAMRLLLSTDPSGRGAK 573
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8706.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KYI2_9PHAE6.230e-1264.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8706contigA-nodosum_M_contig8706:11443..12616 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8706.1.1mRNA_A-nodosum_M_contig8706.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8706 11442..12616 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8706.1.1 ID=prot_A-nodosum_M_contig8706.1.1|Name=mRNA_A-nodosum_M_contig8706.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=90bp
VIVANLASTPALCRSLLDSDPPLTSPKRGIVDYLVTLAMLRTKEKEEEEI
GTRRECMRALIGLAESRSTRNMRAMRLLLSATPSGGGAKC
back to top