prot_A-nodosum_M_contig87.45.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig87.45.1
Unique Nameprot_A-nodosum_M_contig87.45.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length91
Homology
BLAST of mRNA_A-nodosum_M_contig87.45.1 vs. uniprot
Match: A0A6H5L0U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0U7_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 2.330e-39
Identity = 78/90 (86.67%), Postives = 85/90 (94.44%), Query Frame = 0
Query:    1 MLEKRSKLPAFEMRDHIVSTVKSSQVVVVSGETGCGKTTQVPQLVLDTMIEAGQGATANIIVTQPRRISAVGVAERIAAERAERVGETAG 90
            ML KRSKLPA+EMRDHIV TV+++QVVVVSGETGCGKTTQVPQLVLDTMI   +GA+ANIIVTQPRRISAVGVAERIAAERAER+GETAG
Sbjct:  194 MLAKRSKLPAYEMRDHIVRTVRNAQVVVVSGETGCGKTTQVPQLVLDTMIMEKEGASANIIVTQPRRISAVGVAERIAAERAERIGETAG 283          
BLAST of mRNA_A-nodosum_M_contig87.45.1 vs. uniprot
Match: D7G1J2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J2_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 2.550e-39
Identity = 78/90 (86.67%), Postives = 85/90 (94.44%), Query Frame = 0
Query:    1 MLEKRSKLPAFEMRDHIVSTVKSSQVVVVSGETGCGKTTQVPQLVLDTMIEAGQGATANIIVTQPRRISAVGVAERIAAERAERVGETAG 90
            ML KRSKLPA+EMRDHIV TV+++QVVVVSGETGCGKTTQVPQLVLDTMI   +GA+ANIIVTQPRRISAVGVAERIAAERAER+GETAG
Sbjct:  264 MLAKRSKLPAYEMRDHIVRTVRNAQVVVVSGETGCGKTTQVPQLVLDTMIMEKEGASANIIVTQPRRISAVGVAERIAAERAERIGETAG 353          
BLAST of mRNA_A-nodosum_M_contig87.45.1 vs. uniprot
Match: A0A7S2NVW4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NVW4_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.370e-32
Identity = 60/90 (66.67%), Postives = 73/90 (81.11%), Query Frame = 0
Query:    1 MLEKRSKLPAFEMRDHIVSTVKSSQVVVVSGETGCGKTTQVPQLVLDTMIEAGQGATANIIVTQPRRISAVGVAERIAAERAERVGETAG 90
            M+ +R  LPA++M+  IV  +  +QV VVSG+TGCGKTTQVPQLVLD +I  G GA ANII+TQPRRISA+GVAERIA+ER ER+GET G
Sbjct:   46 MMSQRCNLPAYQMKTEIVKMIAENQVTVVSGDTGCGKTTQVPQLVLDDLILQGGGAGANIIITQPRRISAIGVAERIASERCERIGETVG 135          
BLAST of mRNA_A-nodosum_M_contig87.45.1 vs. uniprot
Match: B8C1N5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1N5_THAPS)

HSP 1 Score: 124 bits (310), Expect = 5.730e-31
Identity = 59/90 (65.56%), Postives = 79/90 (87.78%), Query Frame = 0
Query:    1 MLEKRSKLPAFEMRDHIVSTVKSSQVVVVSGETGCGKTTQVPQLVLDTMIEAGQGATANIIVTQPRRISAVGVAERIAAERAERVGETAG 90
            ML +R KLPA++M+D ++ T++++QV V+SG+TGCGKTTQVPQLVLD +I + +G+ AN+IVTQPRRISA+GV+ERIAAER ER+GET G
Sbjct:    1 MLSQRIKLPAYKMKDKVLETIRANQVTVISGDTGCGKTTQVPQLVLDDLILSNRGSEANVIVTQPRRISAIGVSERIAAERCERIGETVG 90          
BLAST of mRNA_A-nodosum_M_contig87.45.1 vs. uniprot
Match: A0A7S3QBY0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBY0_9STRA)

HSP 1 Score: 124 bits (310), Expect = 5.930e-31
Identity = 63/90 (70.00%), Postives = 76/90 (84.44%), Query Frame = 0
Query:    1 MLEKRSKLPAFEMRDHIVSTVKSSQVVVVSGETGCGKTTQVPQLVLDTMIEAGQGATANIIVTQPRRISAVGVAERIAAERAERVGETAG 90
            ML +R +LPAF+M + IV T+ S+Q+ VVSG+TGCGKTTQVPQLVLD MI   +G+ ANIIVTQPRRISA+GV+ERIA+ER ERVGET G
Sbjct:  722 MLSQRQRLPAFQMEEKIVRTIGSNQISVVSGDTGCGKTTQVPQLVLDDMIRQNRGSEANIIVTQPRRISAIGVSERIASERCERVGETVG 811          
BLAST of mRNA_A-nodosum_M_contig87.45.1 vs. uniprot
Match: A0A835Z857_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z857_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.490e-29
Identity = 62/90 (68.89%), Postives = 72/90 (80.00%), Query Frame = 0
Query:    1 MLEKRSKLPAFEMRDHIVSTVKSSQVVVVSGETGCGKTTQVPQLVLDTMIEAGQGATANIIVTQPRRISAVGVAERIAAERAERVGETAG 90
            M  KR +LPA++M D IV  +  +QVVV+SGETGCGKTTQVPQLVLD +I  G GA AN++VTQPRRISA+GVAERIA ER ERVG  AG
Sbjct:  738 MQAKREQLPAYQMADGIVKAISQNQVVVISGETGCGKTTQVPQLVLDHLIATGVGACANMVVTQPRRISAIGVAERIAQERCERVGGMAG 827          
BLAST of mRNA_A-nodosum_M_contig87.45.1 vs. uniprot
Match: D7FS22_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS22_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 4.040e-28
Identity = 58/90 (64.44%), Postives = 72/90 (80.00%), Query Frame = 0
Query:    1 MLEKRSKLPAFEMRDHIVSTVKSSQVVVVSGETGCGKTTQVPQLVLDTMIEAGQGATANIIVTQPRRISAVGVAERIAAERAERVGETAG 90
            M+ +R  LPA+  R+ IV T++ +QVVV+SGETGCGKTTQVPQ VLD +I+ G+G   NII TQPRRISAVGVA+R+A+ER ERVG T G
Sbjct:  504 MMAQRRNLPAYLQREDIVKTIRDNQVVVLSGETGCGKTTQVPQFVLDDLIDQGEGGKCNIICTQPRRISAVGVADRVASERCERVGGTVG 593          
BLAST of mRNA_A-nodosum_M_contig87.45.1 vs. uniprot
Match: A0A7S4JSU1_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JSU1_GUITH)

HSP 1 Score: 112 bits (279), Expect = 4.690e-28
Identity = 55/90 (61.11%), Postives = 71/90 (78.89%), Query Frame = 0
Query:    1 MLEKRSKLPAFEMRDHIVSTVKSSQVVVVSGETGCGKTTQVPQLVLDTMIEAGQGATANIIVTQPRRISAVGVAERIAAERAERVGETAG 90
            M+E R +LP+F MR+ ++S ++SS+VVVVSGETGCGKTTQVPQ +LD M   G G+  NII TQPRRISA+ VA+R+A ER E +G+T G
Sbjct:   93 MMEGRKRLPSFSMREEVLSVIRSSRVVVVSGETGCGKTTQVPQFILDDMDAQGLGSQCNIICTQPRRISAISVADRVANERCETLGDTVG 182          
BLAST of mRNA_A-nodosum_M_contig87.45.1 vs. uniprot
Match: A0A7S0YLR7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YLR7_9CRYP)

HSP 1 Score: 107 bits (267), Expect = 5.090e-28
Identity = 51/88 (57.95%), Postives = 70/88 (79.55%), Query Frame = 0
Query:    1 MLEKRSKLPAFEMRDHIVSTVKSSQVVVVSGETGCGKTTQVPQLVLDTMIEAGQGATANIIVTQPRRISAVGVAERIAAERAERVGET 88
            +L KR +LPA++MRD  + T+  ++V +VSG+TGCGKTTQ+P L  D M+ +G+G + ++IVTQPRRISA  VAER+A ERAERVGE+
Sbjct:   48 ILAKRRELPAYKMRDQCIQTILGNRVTIVSGDTGCGKTTQLPALYFDHMVASGKGGSTHVIVTQPRRISATSVAERVAQERAERVGES 135          
BLAST of mRNA_A-nodosum_M_contig87.45.1 vs. uniprot
Match: A0A8J5CWS0_CHIOP (ATP-dependent RNA helicase DHX36 n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J5CWS0_CHIOP)

HSP 1 Score: 109 bits (272), Expect = 5.640e-28
Identity = 51/90 (56.67%), Postives = 73/90 (81.11%), Query Frame = 0
Query:    1 MLEKRSKLPAFEMRDHIVSTVKSSQVVVVSGETGCGKTTQVPQLVLDTMIEAGQGATANIIVTQPRRISAVGVAERIAAERAERVGETAG 90
            MLE R KLP+++MRD IV T++++QVVV+SGETGCGKTTQV Q +L+  + +G+G+   I+ TQPRRISA+ VA+R+A ER E++G++ G
Sbjct:    1 MLEVRKKLPSYKMRDEIVDTIRNNQVVVLSGETGCGKTTQVAQFLLEDAVASGEGSVCRIVCTQPRRISAISVAQRVADERGEKIGKSVG 90          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig87.45.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0U7_9PHAE2.330e-3986.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1J2_ECTSI2.550e-3986.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2NVW4_9STRA1.370e-3266.67Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
B8C1N5_THAPS5.730e-3165.56Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S3QBY0_9STRA5.930e-3170.00Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A835Z857_9STRA2.490e-2968.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FS22_ECTSI4.040e-2864.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4JSU1_GUITH4.690e-2861.11Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A7S0YLR7_9CRYP5.090e-2857.95Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A8J5CWS0_CHIOP5.640e-2856.67ATP-dependent RNA helicase DHX36 n=1 Tax=Chionoece... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..90
e-value: 5.1E-34
score: 119.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..82
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 2..90
NoneNo IPR availablePANTHERPTHR18934:SF219DNA/RNA HELICASE, DEAD/DEAH BOX TYPE, N-TERMINALcoord: 2..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig87contigA-nodosum_M_contig87:686633..687300 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig87.45.1mRNA_A-nodosum_M_contig87.45.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig87 686633..687315 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig87.45.1 ID=prot_A-nodosum_M_contig87.45.1|Name=mRNA_A-nodosum_M_contig87.45.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=91bp
MLEKRSKLPAFEMRDHIVSTVKSSQVVVVSGETGCGKTTQVPQLVLDTMI
EAGQGATANIIVTQPRRISAVGVAERIAAERAERVGETAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase