prot_A-nodosum_M_contig87.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig87.1.1
Unique Nameprot_A-nodosum_M_contig87.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length121
Homology
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BLAST of mRNA_A-nodosum_M_contig87.1.1 vs. uniprot
Match: D7G1F4_ECTSI (B box-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F4_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 3.610e-11
Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = 0 
Query:    3 FEVWSKESDMFCTECEVSSATLLRLGCKEEYCQLYWESLHRCGVRAKHVTRPLNS 57
            F+VWS++S  FCTECE + AT+L   C E YC L W +LHR G RAKH T PL S
Sbjct:   45 FQVWSRDSHGFCTECEDTRATVLCHECDEAYCSLCWAALHRRGERAKHETIPLGS 99
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BLAST of mRNA_A-nodosum_M_contig87.1.1 vs. uniprot
Match: A0A6H5KSQ1_9PHAE (B box-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSQ1_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 9.600e-11
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 0 
Query:    3 FEVWSKESDMFCTECEVSSATLLRLGCKEEYCQLYWESLHRCGVRAKHVTRPLNS 57
            F+VWS++S  +CTECE + AT+L   C E YC L W +LHR G RAKH T PL S
Sbjct:  139 FQVWSRDSHGYCTECEDTRATVLCHECDEAYCSLCWAALHRRGERAKHETIPLGS 193
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig87.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1F4_ECTSI3.610e-1158.18B box-type domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5KSQ1_9PHAE9.600e-1156.36B box-type domain-containing protein n=1 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig87contigA-nodosum_M_contig87:15149..16462 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig87.1.1mRNA_A-nodosum_M_contig87.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig87 15149..16462 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig87.1.1 ID=prot_A-nodosum_M_contig87.1.1|Name=mRNA_A-nodosum_M_contig87.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=121bp
NNFEVWSKESDMFCTECEVSSATLLRLGCKEEYCQLYWESLHRCGVRAKH
VTRPLNSTLVAGAIAGVGATRPAPEICIDGSSDEGENVVGSSDETVTKRS
RARPDDHEAPLCPSGHFSSKP
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