prot_A-nodosum_M_contig8696.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8696.1.1
Unique Nameprot_A-nodosum_M_contig8696.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length127
Homology
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: D7FN81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN81_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 2.430e-51
Identity = 86/108 (79.63%), Postives = 93/108 (86.11%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHFAFPLYSLSLS 108
            MIGRAGRPQFDDHAVACILVHEPKKNF+KKFLYEPFPVES+LP +LHNHLSAECAGGAIR RRDAVDYLTWTFYFVRLLANPS+YGLE+    GV      L   +L+
Sbjct: 1825 MIGRAGRPQFDDHAVACILVHEPKKNFFKKFLYEPFPVESKLPASLHNHLSAECAGGAIRSRRDAVDYLTWTFYFVRLLANPSFYGLEDTSTEGVQEHLLGLVESTLA 1932          
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: A0A7S1T1Q3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T1Q3_9CHLO)

HSP 1 Score: 142 bits (357), Expect = 1.240e-39
Identity = 64/98 (65.31%), Postives = 76/98 (77.55%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHF 98
            M+GRAGRPQ+D H VA I+VHEPKKNFYKKFLYEPFPVES LP  L +H++AE  GG +R  +DA+DYLTWTF++ RLL NPSYY LE      V+ F
Sbjct:   20 MMGRAGRPQYDKHGVAVIMVHEPKKNFYKKFLYEPFPVESSLPEQLPDHINAEVVGGTVRSMQDALDYLTWTFFYRRLLQNPSYYDLESTEAESVNGF 117          
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: A0A7S1CMX3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMX3_9STRA)

HSP 1 Score: 137 bits (346), Expect = 2.490e-39
Identity = 67/100 (67.00%), Postives = 77/100 (77.00%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPG--ALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHF 98
            M+GRAGRPQFD   VA ILVHEPKKNFY+KFLYEPFPVESQL    ALH+ L+AE AG AI+ R DA +YLTWT++F RL ANPSYY  E+  P G+  F
Sbjct:   36 MMGRAGRPQFDTQGVAMILVHEPKKNFYRKFLYEPFPVESQLKAHHALHDALNAEIAGNAIKSRADAAEYLTWTYFFRRLCANPSYYDCEDGSPDGIRVF 135          
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: A0A835Z6M6_9STRA (Sec63 Brl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M6_9STRA)

HSP 1 Score: 149 bits (376), Expect = 3.200e-39
Identity = 70/98 (71.43%), Postives = 80/98 (81.63%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHF 98
            MIGRAGRPQFD HAVA ILVHEPKKNF KKFLYEPFPVESQL GAL NH++AE AGGAI  R DA+ Y+TWT+ F R++ NPSYY LE+  P GV+ +
Sbjct: 1058 MIGRAGRPQFDTHAVAVILVHEPKKNFLKKFLYEPFPVESQLAGALPNHINAEIAGGAIGSREDALAYMTWTYLFRRIVQNPSYYQLEDTTPEGVTAY 1155          
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: E9H7W7_DAPPU (Uncharacterized protein n=6 Tax=Daphnia TaxID=6668 RepID=E9H7W7_DAPPU)

HSP 1 Score: 149 bits (375), Expect = 4.400e-39
Identity = 70/124 (56.45%), Postives = 89/124 (71.77%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHFAFPLYSLSLSPAPSLFVCKNERKYGR 124
            M+GRAGRPQ+DDH VAC+LVH+ KK+FYKKFLYEPFPVES L   L  HL+AE   G I  ++DA+DYLTWT++F RLL NP+YYGLE++ P  V+H+   L   SLS   +    + E + GR
Sbjct: 1420 MMGRAGRPQYDDHGVACVLVHDIKKDFYKKFLYEPFPVESSLLDVLPEHLNAEIVAGTICSKQDAIDYLTWTYFFRRLLQNPAYYGLEQLEPTDVNHYLTSLIHRSLSVLEAASCLEIEDEGGR 1543          
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: UPI001EEBA4C6 (activating signal cointegrator 1 complex subunit 3-like isoform X1 n=3 Tax=Daphnia pulicaria TaxID=35523 RepID=UPI001EEBA4C6)

HSP 1 Score: 148 bits (374), Expect = 6.020e-39
Identity = 68/108 (62.96%), Postives = 83/108 (76.85%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHFAFPLYSLSLS 108
            M+GRAGRPQ+DDH VAC+LVH+ KK+FYKKFLYEPFPVES L   L  HL+AE   G I  ++DA+DYLTWTF+F RLL NP+YYGLE++ P  V+H+   L   SLS
Sbjct: 1666 MMGRAGRPQYDDHGVACVLVHDIKKDFYKKFLYEPFPVESSLLDVLPEHLNAEIVAGTICSKQDAIDYLTWTFFFRRLLQNPAYYGLEQLEPTDVNHYLTSLIHRSLS 1773          
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: A0A250WZI2_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WZI2_9CHLO)

HSP 1 Score: 147 bits (372), Expect = 1.120e-38
Identity = 66/89 (74.16%), Postives = 73/89 (82.02%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEE 89
            M+GRAGRPQ+D H VA I+VHEPKK FYK+FLYEPFPVES LPG L NH +AE   G I CR+DAVDYLTWTF+F RLL NPSYY LEE
Sbjct: 1762 MMGRAGRPQYDKHGVAVIMVHEPKKQFYKRFLYEPFPVESSLPGQLANHFNAEVVAGTITCRQDAVDYLTWTFFFRRLLQNPSYYDLEE 1850          
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: A0A482UF37_9ARCH (DEAD/DEAH box helicase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UF37_9ARCH)

HSP 1 Score: 145 bits (367), Expect = 4.450e-38
Identity = 66/102 (64.71%), Postives = 81/102 (79.41%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHFAFPL 102
            M+GRAGRPQF++  VA ILVHEPKK FY+KFLYEPFPVESQL GAL +H++AE +GG+I CR DA++YLTWT++F RLL NP YY LE+  P GV  +   L
Sbjct:  395 MMGRAGRPQFNETGVAVILVHEPKKKFYQKFLYEPFPVESQLRGALVDHINAEVSGGSIICRNDALEYLTWTYFFRRLLQNPGYYSLEDTSPAGVKEYLLAL 496          
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: A0A7S3UTV5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTV5_HETAK)

HSP 1 Score: 144 bits (364), Expect = 6.210e-38
Identity = 67/108 (62.04%), Postives = 83/108 (76.85%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHFAFPLYSLSLS 108
            M+GRAGRPQFDD AVA +LVHEPKK FY+KFLY PFPVES L   LHNH+SAE AGG+I+ ++DAV+YLTWT++F RL+ NP+YY LE+  P GV  +   L    L+
Sbjct:  528 MMGRAGRPQFDDTAVAAVLVHEPKKIFYQKFLYSPFPVESSLREYLHNHISAEVAGGSIKSKQDAVEYLTWTYFFRRLVMNPTYYHLEDPSPEGVQDYLLSLVDAVLT 635          
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: A0A7S0PBS9_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PBS9_CAFRO)

HSP 1 Score: 145 bits (366), Expect = 7.130e-38
Identity = 68/108 (62.96%), Postives = 82/108 (75.93%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHFAFPLYSLSLS 108
            M+GRAGRPQFDD AVA I+VHEPKK FY+KFLYEPFPVESQL G LH+H++AE A G IR R DA D+LTWT++F RL+ NPS+Y L+   P  VS +   L   +LS
Sbjct: 1213 MMGRAGRPQFDDDAVAVIMVHEPKKQFYRKFLYEPFPVESQLLGCLHDHINAEVAAGTIRSRADAADWLTWTYFFRRLVRNPSFYHLDATDPAAVSAYLAELVDSTLS 1320          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN81_ECTSI2.430e-5179.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1T1Q3_9CHLO1.240e-3965.31Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A7S1CMX3_9STRA2.490e-3967.00Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A835Z6M6_9STRA3.200e-3971.43Sec63 Brl domain-containing protein n=1 Tax=Tribon... [more]
E9H7W7_DAPPU4.400e-3956.45Uncharacterized protein n=6 Tax=Daphnia TaxID=6668... [more]
UPI001EEBA4C66.020e-3962.96activating signal cointegrator 1 complex subunit 3... [more]
A0A250WZI2_9CHLO1.120e-3874.16Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A482UF37_9ARCH4.450e-3864.71DEAD/DEAH box helicase (Fragment) n=1 Tax=archaeon... [more]
A0A7S3UTV5_HETAK6.210e-3862.04Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S0PBS9_CAFRO7.130e-3862.96Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 39..110
e-value: 4.3E-18
score: 67.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..38
e-value: 6.1E-12
score: 47.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..85
NoneNo IPR availablePANTHERPTHR24075SEC63 DOMAIN-CONTAININGcoord: 1..100
NoneNo IPR availablePANTHERPTHR24075:SF6ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 3coord: 1..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8696contigA-nodosum_M_contig8696:22419..23604 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8696.1.1mRNA_A-nodosum_M_contig8696.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8696 22354..23607 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8696.1.1 ID=prot_A-nodosum_M_contig8696.1.1|Name=mRNA_A-nodosum_M_contig8696.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=127bp
MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHL
SAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHFAF
PLYSLSLSPAPSLFVCKNERKYGRPR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR027417P-loop_NTPase