mRNA_A-nodosum_M_contig8696.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: D7FN81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN81_ECTSI) HSP 1 Score: 186 bits (471), Expect = 1.250e-51 Identity = 87/109 (79.82%), Postives = 94/109 (86.24%), Query Frame = 1
Query: 1 QMIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHFAFPLYSLSLS 327
QMIGRAGRPQFDDHAVACILVHEPKKNF+KKFLYEPFPVES+LP +LHNHLSAECAGGAIR RRDAVDYLTWTFYFVRLLANPS+YGLE+ GV L +L+
Sbjct: 1824 QMIGRAGRPQFDDHAVACILVHEPKKNFFKKFLYEPFPVESKLPASLHNHLSAECAGGAIRSRRDAVDYLTWTFYFVRLLANPSFYGLEDTSTEGVQEHLLGLVESTLA 1932
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: A0A7S1T1Q3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T1Q3_9CHLO) HSP 1 Score: 144 bits (362), Expect = 5.030e-40 Identity = 65/99 (65.66%), Postives = 77/99 (77.78%), Query Frame = 1
Query: 1 QMIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHF 297
QM+GRAGRPQ+D H VA I+VHEPKKNFYKKFLYEPFPVES LP L +H++AE GG +R +DA+DYLTWTF++ RLL NPSYY LE V+ F
Sbjct: 19 QMMGRAGRPQYDKHGVAVIMVHEPKKNFYKKFLYEPFPVESSLPEQLPDHINAEVVGGTVRSMQDALDYLTWTFFYRRLLQNPSYYDLESTEAESVNGF 117
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: A0A7S1CMX3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMX3_9STRA) HSP 1 Score: 139 bits (351), Expect = 9.910e-40 Identity = 68/101 (67.33%), Postives = 78/101 (77.23%), Query Frame = 1
Query: 1 QMIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPG--ALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHF 297
QM+GRAGRPQFD VA ILVHEPKKNFY+KFLYEPFPVESQL ALH+ L+AE AG AI+ R DA +YLTWT++F RL ANPSYY E+ P G+ F
Sbjct: 35 QMMGRAGRPQFDTQGVAMILVHEPKKNFYRKFLYEPFPVESQLKAHHALHDALNAEIAGNAIKSRADAAEYLTWTYFFRRLCANPSYYDCEDGSPDGIRVF 135
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: A0A835Z6M6_9STRA (Sec63 Brl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M6_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.600e-39 Identity = 71/99 (71.72%), Postives = 81/99 (81.82%), Query Frame = 1
Query: 1 QMIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHF 297
QMIGRAGRPQFD HAVA ILVHEPKKNF KKFLYEPFPVESQL GAL NH++AE AGGAI R DA+ Y+TWT+ F R++ NPSYY LE+ P GV+ +
Sbjct: 1057 QMIGRAGRPQFDTHAVAVILVHEPKKNFLKKFLYEPFPVESQLAGALPNHINAEIAGGAIGSREDALAYMTWTYLFRRIVQNPSYYQLEDTTPEGVTAY 1155
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: UPI001EEBA4C6 (activating signal cointegrator 1 complex subunit 3-like isoform X1 n=3 Tax=Daphnia pulicaria TaxID=35523 RepID=UPI001EEBA4C6) HSP 1 Score: 150 bits (379), Expect = 3.020e-39 Identity = 69/109 (63.30%), Postives = 84/109 (77.06%), Query Frame = 1
Query: 1 QMIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHFAFPLYSLSLS 327
QM+GRAGRPQ+DDH VAC+LVH+ KK+FYKKFLYEPFPVES L L HL+AE G I ++DA+DYLTWTF+F RLL NP+YYGLE++ P V+H+ L SLS
Sbjct: 1665 QMMGRAGRPQYDDHGVACVLVHDIKKDFYKKFLYEPFPVESSLLDVLPEHLNAEIVAGTICSKQDAIDYLTWTFFFRRLLQNPAYYGLEQLEPTDVNHYLTSLIHRSLS 1773
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: E9H7W7_DAPPU (Uncharacterized protein n=6 Tax=Daphnia TaxID=6668 RepID=E9H7W7_DAPPU) HSP 1 Score: 149 bits (377), Expect = 5.590e-39 Identity = 71/125 (56.80%), Postives = 90/125 (72.00%), Query Frame = 1
Query: 1 QMIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHFAFPLYSLSLSPAPSLFVCKNERKYGR 375
QM+GRAGRPQ+DDH VAC+LVH+ KK+FYKKFLYEPFPVES L L HL+AE G I ++DA+DYLTWT++F RLL NP+YYGLE++ P V+H+ L SLS + + E + GR
Sbjct: 1419 QMMGRAGRPQYDDHGVACVLVHDIKKDFYKKFLYEPFPVESSLLDVLPEHLNAEIVAGTICSKQDAIDYLTWTYFFRRLLQNPAYYGLEQLEPTDVNHYLTSLIHRSLSVLEAASCLEIEDEGGR 1543
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: A0A250WZI2_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WZI2_9CHLO) HSP 1 Score: 149 bits (377), Expect = 5.630e-39 Identity = 67/90 (74.44%), Postives = 74/90 (82.22%), Query Frame = 1
Query: 1 QMIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEE 270
QM+GRAGRPQ+D H VA I+VHEPKK FYK+FLYEPFPVES LPG L NH +AE G I CR+DAVDYLTWTF+F RLL NPSYY LEE
Sbjct: 1761 QMMGRAGRPQYDKHGVAVIMVHEPKKQFYKRFLYEPFPVESSLPGQLANHFNAEVVAGTITCRQDAVDYLTWTFFFRRLLQNPSYYDLEE 1850
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: A0A482UF37_9ARCH (DEAD/DEAH box helicase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UF37_9ARCH) HSP 1 Score: 147 bits (372), Expect = 2.150e-38 Identity = 67/103 (65.05%), Postives = 82/103 (79.61%), Query Frame = 1
Query: 1 QMIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHFAFPL 309
QM+GRAGRPQF++ VA ILVHEPKK FY+KFLYEPFPVESQL GAL +H++AE +GG+I CR DA++YLTWT++F RLL NP YY LE+ P GV + L
Sbjct: 394 QMMGRAGRPQFNETGVAVILVHEPKKKFYQKFLYEPFPVESQLRGALVDHINAEVSGGSIICRNDALEYLTWTYFFRRLLQNPGYYSLEDTSPAGVKEYLLAL 496
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: A0A7S3UTV5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTV5_HETAK) HSP 1 Score: 146 bits (369), Expect = 2.860e-38 Identity = 68/109 (62.39%), Postives = 84/109 (77.06%), Query Frame = 1
Query: 1 QMIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHFAFPLYSLSLS 327
QM+GRAGRPQFDD AVA +LVHEPKK FY+KFLY PFPVES L LHNH+SAE AGG+I+ ++DAV+YLTWT++F RL+ NP+YY LE+ P GV + L L+
Sbjct: 527 QMMGRAGRPQFDDTAVAAVLVHEPKKIFYQKFLYSPFPVESSLREYLHNHISAEVAGGSIKSKQDAVEYLTWTYFFRRLVMNPTYYHLEDPSPEGVQDYLLSLVDAVLT 635
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Match: A0A7S0PBS9_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PBS9_CAFRO) HSP 1 Score: 147 bits (371), Expect = 3.560e-38 Identity = 69/109 (63.30%), Postives = 83/109 (76.15%), Query Frame = 1
Query: 1 QMIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLSAECAGGAIRCRRDAVDYLTWTFYFVRLLANPSYYGLEEVPPMGVSHFAFPLYSLSLS 327
QM+GRAGRPQFDD AVA I+VHEPKK FY+KFLYEPFPVESQL G LH+H++AE A G IR R DA D+LTWT++F RL+ NPS+Y L+ P VS + L +LS
Sbjct: 1212 QMMGRAGRPQFDDDAVAVIMVHEPKKQFYRKFLYEPFPVESQLLGCLHDHINAEVAAGTIRSRADAADWLTWTYFFRRLVRNPSFYHLDATDPAAVSAYLAELVDSTLS 1320 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8696.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig8696.1.1 >prot_A-nodosum_M_contig8696.1.1 ID=prot_A-nodosum_M_contig8696.1.1|Name=mRNA_A-nodosum_M_contig8696.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=127bp MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESQLPGALHNHLback to top mRNA from alignment at A-nodosum_M_contig8696:22354..23607- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig8696.1.1 ID=mRNA_A-nodosum_M_contig8696.1.1|Name=mRNA_A-nodosum_M_contig8696.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1254bp|location=Sequence derived from alignment at A-nodosum_M_contig8696:22354..23607- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig8696:22354..23607- >mRNA_A-nodosum_M_contig8696.1.1 ID=mRNA_A-nodosum_M_contig8696.1.1|Name=mRNA_A-nodosum_M_contig8696.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=381bp|location=Sequence derived from alignment at A-nodosum_M_contig8696:22354..23607- (Ascophyllum nodosum dioecious)back to top |