prot_A-nodosum_M_contig869.23.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig869.23.1
Unique Nameprot_A-nodosum_M_contig869.23.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length453
Homology
BLAST of mRNA_A-nodosum_M_contig869.23.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 3.100e-42
Identity = 128/394 (32.49%), Postives = 197/394 (50.00%), Query Frame = 0
Query:   79 IMEGLTEASQNNYNATVVGDVQIAEVLCDTLVEAEGASSLTFTFSPGENIVVDKAFYTEHSGDVFTDGLSRKVWAGTEEGTDPLQ---ARRVTMTWAEECSAETFLLKLDTNNGDGTFTVVRTIPCNVGTDINICVFEVEVNAEDIPPHGDDTPLTDTNQTSN--GRRVQAEIGRRTELKNMITGSN-----NLERQLQTTEQVDVLLFYTPEAMQEQLFTSTSQMESYITDAMAGVQIGVENSLI-DLNIIVVRIEMLPY-------VETATLALEIR-ENLATNTEVATMRDLYGADLVHLITGVNIIGSSGVQICGTANLLMDSYIEDGTADQYAFGITAAGS-CFLTNTLGHELGHNFGCWHDIGTLQEQFFFQQVSYYHGFRDCSGIFP 452
            + EGL E  + +    V+GD+++ ++LCD+L +A  +S L FT S  E ++ ++  Y+   G+V  DG +RK W G     +P      R V+MTW + C  ETFLLKL + N DG+ ++  ++PC+ G+   IC+ E++    D     D +  + ++ TS   G R+  E  RR     M  GS        +R LQ T  +DVL+FY+PEA   +   S +Q+ + I + M  +   + NS I DL   +V +  LPY       +++  + LE   + LA N+ V  +R+ Y  DLV L+              GT  L    YI +G A+   FG +  GS CF   +  HE+ HN GC+HD    + Q       Y HG+R C+G  P
Sbjct:  151 VEEGLVEVLETDELTAVMGDIELGDLLCDSLEDATDSSLLRFTISSTETVIAERTSYSSIDGNVLPDGNARKTWLGEVVDPEPSTNSIPRTVSMTWTDPCDIETFLLKLVSRNSDGSTSIATSVPCSAGSSSEICMVELQKFFYDESDAVDTSQSSSSSSTSKYQGSRMLKE--RRVSTTFMEEGSRWSQGIPSDRSLQGTTVIDVLIFYSPEAASSEGI-SDAQLLTRIVEGMVTLNQAITNSAIADLEYRLVHVAELPYSQMTYDPIDSDDIDLEPELDALAANSAVNDLRNEYQGDLVQLVG----------YFPGTCGL---GYIFNGNAE---FGFSLVGSNCFDNFSHTHEIAHNMGCYHDRDNSETQ-----DEYRHGYRYCTGSDP 520          
BLAST of mRNA_A-nodosum_M_contig869.23.1 vs. uniprot
Match: D8LCP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP8_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 4.530e-23
Identity = 91/313 (29.07%), Postives = 146/313 (46.65%), Query Frame = 0
Query:   83 LTEASQNNYNATVVGDVQIAEVLCDTLVEAEGASSLTFTFSPGENIVVDKAFYTEHSGDVFTDGLSRKVWAGTEEGTDPLQA----RRVTMTWAEECSAETFLLKLDTNNGDGTFTVVRTIPCNVGTDINICVFEVEVNAEDIPPHGDDTPLTDTNQTSNGRRVQAEIGRRTELKNMITGSNNLERQLQTTEQVDV-----------------------LLFYTPEAMQEQLFTSTSQMESYITDAMAGVQIGVENSLIDLNIIVVRIEMLPYVE-----TATLALEIRENLATNTEVATMRDLYGADLVHLI 363
            L E  + +   TV+G+VQ+ E+LCD+LV+AE A  L F  S  E I+ ++  YT  SG+ FT G+ R++W G     +P       R V+MTW E C  ETF LK+  +  +G  + V+++PC + + + +C+ EV   A D  P G +      N T     V+  +G      + I G  + +R                                 ++ YT  ++   +  S  QME+ ++ A++ V +G ENS I +    V    LPY +     ++T    +RE+   N     +RD YGAD+V L+
Sbjct:  150 LAETLEVDEQVTVLGEVQLGELLCDSLVQAEDAPLLQFALSANETIIANRTSYTVVSGETFTGGVGRRIWNGVVIDPEPDAGEAFPRGVSMTWGEVCDVETFSLKVSKHTVEGNTSAVKSVPCGL-SGVEVCLVEV---AFDFLP-GKEPLRVGVNSTGQSTAVRRRLG------DGILGGGSRDRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVLYTNMSL-VLMGVSDVQMETMVSAAISTVNVGFENSNIGIETTTVYKGRLPYYQDCADDSSTKLSALREDEGVNA----LRDEYGADIVLLV 446          
BLAST of mRNA_A-nodosum_M_contig869.23.1 vs. uniprot
Match: D7FTV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV1_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 1.130e-18
Identity = 76/286 (26.57%), Postives = 137/286 (47.90%), Query Frame = 0
Query:   96 VGDVQIAEVLCDTLVEAEGASSLTFTFSPGENIVVDKAFYTEHSGDVFTDGLSRKVWAGTEEGTDPLQARRVTMTWAEECSAETFLLKLDTNNGDGTFTVVRTIPCNVGTDINICVFEVEVNAEDIPPHGDDTPLTDTNQTSNGRRVQAEIGRR-----------TELKNMITGSNNLERQLQTTEQVDVLLFYTPEAMQEQLFTSTSQMESYITDAMAGVQIGVENS-LIDLNIIVVRIEMLPYVETATLA---LEIR---ENLATNTEVATMRDLYGADLVHLI 363
            VGD+++ E+LCD+L +A  +S L FT S  E ++ ++  Y+   G V +DG++R                             +FLLKL + N DG+ ++V ++PC+ G+   +C+ E+E+   D      ++   DT Q+        + G R           TE +++ +     +R LQ T  +DVL+ Y+PEA   +     +Q+ + I + M  +   + NS +  L   +V++  LPY +   +    ++++   + LA N+ V  +RD Y  DLV L+
Sbjct:   10 VGDIELGELLCDSLEDAADSSLLRFTISSTETVIAERTSYSSIDGSVLSDGITRM----------------------------SFLLKLVSRNADGSTSIVTSVPCSAGSSSELCMVELEMFFHD------ESEAVDTTQSXXXXXXXKDQGSRMLKEQRVSMTYTEEESLRSQGLPSDRSLQATTVIDVLIVYSPEAAYARGIAE-AQLLTRIVEGMVTLNQAITNSGIAGLEYRLVQVAELPYSQMTYVPSDDIDLKPELDALAANSNVTDLRDQYQGDLVQLV 260          
BLAST of mRNA_A-nodosum_M_contig869.23.1 vs. uniprot
Match: D8LMP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP1_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 1.810e-13
Identity = 47/160 (29.38%), Postives = 78/160 (48.75%), Query Frame = 0
Query:   79 IMEGLTEASQNNYNATVVGDVQIAEVLCDTLVEAEGASSLTFTFSPGENIVVDKAFYTEHSGDVFTDGLSRKVWAGTEEGTDPLQARRVTMTWAEECSAETFLLKLDTNNGDGTFTVVRTIPCNVGTDINICVFEVEVNAEDIPPHGDDTPLTDTNQTSN 238
            + E L E  + +   TVVGD+++ ++LCD+L +A  +S L FT S  E ++ ++  Y+   G +  DG +RK                            TFLLKL + N DG+ ++V ++PC+ G+   IC+ E+E    D     D    + ++ TSN
Sbjct:   65 VEEELVEVLETDELTTVVGDIELGDLLCDSLEDASDSSLLRFTISSTETVIAERTSYSSIDGSILPDGNTRK----------------------------TFLLKLVSRNSDGSTSIVTSVPCSAGSSSEICMVELEKFFYDESDAVDTAQSSSSSSTSN 196          
BLAST of mRNA_A-nodosum_M_contig869.23.1 vs. uniprot
Match: UPI00135B5B8B (M12 family metallo-peptidase n=1 Tax=Methylicorpusculum oleiharenae TaxID=1338687 RepID=UPI00135B5B8B)

HSP 1 Score: 63.9 bits (154), Expect = 3.770e-7
Identity = 77/292 (26.37%), Postives = 126/292 (43.15%), Query Frame = 0
Query:  170 TW----AEECSAETFLLKLDTNNGDGTFTVVRTIPCNVGTDINICVFEVEVNAEDIPPHGDDTPLTDTNQTSNGRRVQAEIGRRTELKNMITGSNN---LERQLQTTEQVDVLLFYTPEAMQEQLFTSTSQMESYITDAMAGVQIGVENSLIDLNIIVVRIEMLPYVETATLALEIRENLATNT----EVATMRDLYGADLVHLITGVNIIGSSGVQICGTANLLMDSYIEDGTADQYAFGITAAGS---CFLTNTLGHELGHNFGCWHDIGTLQEQFFFQQVSYYHGFRDC 447
            TW    A E ++E FL  +  +N  GT ++        G D+    +E+ + A D+       P  + +   + + V+  I    E+    TGS+       ++     +DV++ YTP++         S +E+ I +A+A       NS ID+ I +V +  + YVE+ + +  + +   T+      V T+R+ YGAD V LIT       +    CGT  L+        +   YAF +    S   C   +TL HELGHN G  HD  +           Y +G+R C
Sbjct:  140 TWIGHVAGESNSEVFLT-VRGSNMSGTVSI--------GDDL----YEINLGANDLHEITKVDPARNPDHGDDAKAVEDFIAEGGEIDT--TGSSEPVVANAEINAGTVIDVMVVYTPQSRINAY--GQSGIEAKIVNAVAKANQSYINSQIDMQINLVHMAEVSYVESGSTSTSLSDITGTSDGKMDAVHTLRNQYGADQVVLIT-------TDTSACGTGYLMSSPSTSFAS---YAFSVVHDDSKYACLSNHTLAHELGHNQGSHHDRASATST---PAYDYSYGYRLC 401          
BLAST of mRNA_A-nodosum_M_contig869.23.1 vs. uniprot
Match: A0A7S1UNL1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNL1_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.410e-6
Identity = 47/135 (34.81%), Postives = 67/135 (49.63%), Query Frame = 0
Query:  294 MESYITDAMAGVQIGVENSLIDLNIIVVRIEMLPYVETATLALEIRE-NLATN--TEVATMRDLYGADLVHLITGVNIIGSSGVQICGTANLLMDSYIEDGTADQYAFGITAAGSCFLTNTLGHELGHNFGCWHD 425
            +ES I  ++A   IG   S IDL + +V  EM+ Y E ++ +  + +    TN    VA +R+ YGAD V     V +  + G   CG A      ++       YAF +TA        T GHE+GHNFGC+HD
Sbjct:   23 IESIIQTSVAETNIGYRESEIDLRMRLVHTEMVEYTEPSSFSTNLNDLTFGTNGLEGVAALRNQYGADFV-----VFLRHNGG---CGIA------WVPSSPNAAYAFSVTAWDCATGHFTFGHEIGHNFGCYHD 143          
BLAST of mRNA_A-nodosum_M_contig869.23.1 vs. uniprot
Match: A0A7S2LJR7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LJR7_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 2.310e-5
Identity = 56/194 (28.87%), Postives = 87/194 (44.85%), Query Frame = 0
Query:  272 VDVLLFYTPEAMQEQLFTSTSQ---------MESYITDAMAGVQIGVENSLIDLNIIVVRIEMLPYVETATLALEIRENLATNTE-----VATMRDLYGADLVHLITGVNIIGSSGVQICGTANLLMDSYIEDGTADQYAFGITAAGSCFLTNTLGHELGHNFGCWHDIGTLQEQFFFQQVSYYHGFRDCSGIF 451
            +DV++ YT EAM E    + S          +E  I  A+A   +G+ NS    ++ +V  +M+ Y E+  L+ ++ +   T+ +     V T RD + AD+V LIT       SG+   G +   M S    G    Y  G          +T  HELGHN+GC+H+      Q     V+Y HG++     F
Sbjct:  179 IDVMVVYTEEAMCEAAGVALSSCNQASHKSTIEGQINLAVANNNVGLANSNTGTSLNLVHQDMVDYTESGDLSTDL-DRFRTDGDGHMDTVHTHRDTHKADIVALITA----NGSGIGYVGASKANMFSITNWG----YIPG----------HTFAHELGHNWGCYHNRANSNTQ-----VNYAHGYQSPDETF 348          
BLAST of mRNA_A-nodosum_M_contig869.23.1 vs. uniprot
Match: A0A5Q4ERP7_9BACT (Uncharacterized protein n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A5Q4ERP7_9BACT)

HSP 1 Score: 57.8 bits (138), Expect = 3.040e-5
Identity = 60/180 (33.33%), Postives = 78/180 (43.33%), Query Frame = 0
Query:  272 VDVLLFYTPEAMQEQLFTSTSQMESYITDAMAGVQIGVENSLIDLNIIVVRIEMLPYVE---TATLALEIRENLATNTEVATMRDLYGADLVHLITGVNIIGSSGVQICGTANLLMDSYIEDGTADQY---AFGITAAGSCFLTNTLGHELGHNFGCWHDIGTLQEQFFFQQVSYYHGFR 445
            VDVL+ YTP A+      S   ME    +         ENS ++  + +V +    YVE   +A L      +     EV  +RDLYGADLVHLI       S     CG A      Y+  G    +   AFG+T      LT    HE+GHN GC HD    +E   F    Y +G+R
Sbjct:  258 VDVLMVYTPAALATA--GSPEFMELSAVNWFETTNFAYENSGVEHRLRMVGLFETDYVEIGASADLGRLRNPSDGYMDEVHELRDLYGADLVHLI-------SMSTGACGVA------YVMPGITPGFESSAFGLTRFTCGALT--FAHEIGHNMGCGHD----KENANFAAFCYSYGYR 416          
BLAST of mRNA_A-nodosum_M_contig869.23.1 vs. uniprot
Match: A0A7X4HZP4_9BACT (PPC domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7X4HZP4_9BACT)

HSP 1 Score: 57.0 bits (136), Expect = 6.500e-5
Identity = 54/169 (31.95%), Postives = 75/169 (44.38%), Query Frame = 0
Query:  269 TEQVDVLLFYTPEAMQE-----QLFTSTSQMESYITDAMAGVQIGVENSLIDLNIIVVRIEMLPYVETATLALEIRENLATNTEVATMRDLYGADLVHLITGVNIIGSSGVQICGTANLLMDSYIEDGTADQYAFGITAAGSCFLTN-TLGHELGHNFGCWHDIGTLQE 431
            + +VDVL+ YTP+A ++         + + M   I  ++A     +    +   I +V +E   Y       L+  +    +  V  +RDLY ADLVHLI    I  S G   CG A      YI   +      G+T A  C   N T  HELGHNFG  HD   LQ+
Sbjct:  224 SSRVDVLVLYTPQARRDLGGSLNAAAARTLMVEKIQASVADTNSALLAGGLPHRIQLVFVEETGYFSERGNTLQTLDAFRDDDTVRALRDLYRADLVHLIVRDGIPNSDGDPTCGIA------YIPGHS------GLTLA-ECLSPNLTFAHELGHNFGLSHDRYQLQK 379          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig869.23.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JF50_9PHAE3.100e-4232.49LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
D8LCP8_ECTSI4.530e-2329.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTV1_ECTSI1.130e-1826.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMP1_ECTSI1.810e-1329.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI00135B5B8B3.770e-726.37M12 family metallo-peptidase n=1 Tax=Methylicorpus... [more]
A0A7S1UNL1_9STRA1.410e-634.81Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2LJR7_9STRA2.310e-528.87Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A5Q4ERP7_9BACT3.040e-533.33Uncharacterized protein n=1 Tax=Phycisphaeraceae b... [more]
A0A7X4HZP4_9BACT6.500e-531.95PPC domain-containing protein n=1 Tax=Acidobacteri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024079Metallopeptidase, catalytic domain superfamilyGENE3D3.40.390.10Collagenase (Catalytic Domain)coord: 264..448
e-value: 1.9E-10
score: 42.9
NoneNo IPR availablePFAMPF13582Reprolysin_3coord: 296..425
e-value: 1.6E-10
score: 41.5
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 282..427

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig869contigA-nodosum_M_contig869:184119..207330 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig869.23.1mRNA_A-nodosum_M_contig869.23.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig869 183893..207966 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig869.23.1 ID=prot_A-nodosum_M_contig869.23.1|Name=mRNA_A-nodosum_M_contig869.23.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=453bp
MRHPTLEVGTILLALYGVMLRQSVADKKGGPLEGNEGRAHRALSTSSTAG
EGTIVGIRFPVSPDLGASDDTTSRSSTIIMEGLTEASQNNYNATVVGDVQ
IAEVLCDTLVEAEGASSLTFTFSPGENIVVDKAFYTEHSGDVFTDGLSRK
VWAGTEEGTDPLQARRVTMTWAEECSAETFLLKLDTNNGDGTFTVVRTIP
CNVGTDINICVFEVEVNAEDIPPHGDDTPLTDTNQTSNGRRVQAEIGRRT
ELKNMITGSNNLERQLQTTEQVDVLLFYTPEAMQEQLFTSTSQMESYITD
AMAGVQIGVENSLIDLNIIVVRIEMLPYVETATLALEIRENLATNTEVAT
MRDLYGADLVHLITGVNIIGSSGVQICGTANLLMDSYIEDGTADQYAFGI
TAAGSCFLTNTLGHELGHNFGCWHDIGTLQEQFFFQQVSYYHGFRDCSGI
FP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024079MetalloPept_cat_dom_sf