prot_A-nodosum_M_contig8689.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8689.2.1
Unique Nameprot_A-nodosum_M_contig8689.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length152
Homology
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: D8LIA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIA1_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 2.270e-36
Identity = 84/180 (46.67%), Postives = 111/180 (61.67%), Query Frame = 0
Query:    1 MVLDVKPYTMKGLDEMEAIQKALQAAAEAPGGDLTIEQ-----------MEEDAENYLYNLVGILVHKGISKQGHYYSYIRDRRRNAYQGGDGKSQVDGASGSSTNSNGSGAGFMKSLG----------------RDVSAGASSV-GSEGV--GEASWFKYDDDKVTRFDPREMETTCFG 150
            M+LD+KPYTMKG DE EA+++ALQAAAEA GGDLT+EQ           M+EDA +YLYNL GILVH G+++ GHYYSYIRDR ++AY+ G G     GA+   T  +    G  ++                  + V  GA+ V GSE    G+ +W+K++DD VT FDP+E+E  CFG
Sbjct: 1551 MLLDLKPYTMKGTDEREAMEEALQAAAEASGGDLTLEQVTKLHEEQSAKMKEDAGDYLYNLAGILVHAGVAQGGHYYSYIRDRGKSAYEDGAGPGARAGAADDKTRGDAGDGGRKRAXXXXXXXXXXXXXXXXXXKGVEGGAAGVRGSESAAGGQGAWYKFEDDDVTPFDPQEIEACCFG 1730          
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: A0A6H5KKZ1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ1_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 9.880e-33
Identity = 80/182 (43.96%), Postives = 105/182 (57.69%), Query Frame = 0
Query:    1 MVLDVKPYTMKGLDEMEAIQKALQAAAEAPGGDLTIEQ-----------MEEDAENYLYNLVGILVHKGISKQGHYYSYIRDRRRNAYQGGDGKSQ------------------VDGASGSSTNSNGSGAGFMKSLGRDVSAGASSV-GSEGV--GEASWFKYDDDKVTRFDPREMETTCFG 150
            M+LD+KPYTMKG DE  A+++ALQAAAEA GGDLT+EQ           M+EDA +YLYNL GILVH G+++ GHYYSYIRDR ++AY+ G G                     VD    +                + V  GA+ V GS+    G+ +W+K++DD VT FDP+E+E  CFG
Sbjct: 2353 MLLDLKPYTMKGTDERRAMEEALQAAAEASGGDLTLEQVTKLHEEQSAKMKEDAGDYLYNLAGILVHAGVAQGGHYYSYIRDRGKSAYEDGAGPGARARAADDKGRXXXXXXXXVDRKRAAGAERGAXXXXXXXXXXKGVQGGAAGVRGSDSAAGGQGAWYKFEDDDVTPFDPQEIEACCFG 2534          
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: A0A7S4F1U3_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F1U3_CHRCT)

HSP 1 Score: 63.2 bits (152), Expect = 9.520e-9
Identity = 40/124 (32.26%), Postives = 63/124 (50.81%), Query Frame = 0
Query:   40 EEDAENYLYNLVGILVHKGISKQGHYYSYIRDRRRNAY--QGGDGKSQVDGASGSSTNSNGSGAGFMKSLGRDVSAGASSVGS---EGVGEA--------SWFKYDDDKVTRFDPREMETTCFG 150
            +++ + Y+Y LVG+LVH G +  GHYYS+I++RRR  +   G   +    G  G+  +  G G+G +  L    +AG S+ G     G G +         W  ++D  V  FD R++   CFG
Sbjct:   29 DQEGQGYIYQLVGVLVHTGTADSGHYYSFIKERRRGVHCCDGAPSEGTAAGGLGNIGSGGGVGSGSIGGLHVASAAGVSASGGGVVRGAGSSVATKPTSCEWLHFNDTLVEWFDERDIGKCCFG 152          
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: A0A7S1FNV3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FNV3_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.110e-8
Identity = 33/73 (45.21%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    3 LDVKPYTMKGLDEMEAIQKALQAAAEAPGGDLTIEQMEEDA---ENYLYNLVGILVHKGISKQGHYYSYIRDR 72
            L++K Y++KG++ MEA++K    A E  G D  ++    DA   E+Y YNLVG+LVH G+++ GHY+S I+DR
Sbjct: 1924 LNMKKYSLKGMEAMEAMEKGTHQAEEEDG-DTCMDIDPLDALPDEDYQYNLVGVLVHAGVAQGGHYFSVIKDR 1995          
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: A0A3R7BNW5_9STRA (USP domain-containing protein n=15 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BNW5_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.770e-7
Identity = 30/70 (42.86%), Postives = 44/70 (62.86%), Query Frame = 0
Query:    3 LDVKPYTMKGLDEMEAIQKALQAAAEAPGGDLTIEQMEEDAENYLYNLVGILVHKGISKQGHYYSYIRDR 72
            LD+KPYT +GLDE          AAE    D+     +E+ + Y+Y L G+LVH G+++ GHYYS+I+D+
Sbjct: 1769 LDMKPYTKRGLDEK---------AAEDVDDDIGGMDDDENDDEYMYELRGVLVHAGVAQGGHYYSFIKDQ 1829          
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: A0A7S4HMV2_9EUKA (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HMV2_9EUKA)

HSP 1 Score: 59.3 bits (142), Expect = 2.390e-7
Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 0
Query:    1 MVLDVKPYTMKGLDEMEAIQKALQAA---AEAPGGD---------LTIEQMEEDA------ENYLYNLVGILVHKGISKQGHYYSYIRDR 72
            M L++KPYT +G++EMEA Q+  +AA   ++A  G+         +  E+ EE A      + Y Y LVGIL+H+GI+  GHYYS+I+ R
Sbjct: 1628 MTLNMKPYTKEGIEEMEAQQERERAALLSSDAGEGEALKETEDTPIPEEEKEEAAATEHGDDYYNYELVGILIHRGIADSGHYYSFIKLR 1717          
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: A0A8B7Z9Y1_ACAPL (Ubiquitinyl hydrolase 1 n=8 Tax=Valvatida TaxID=41166 RepID=A0A8B7Z9Y1_ACAPL)

HSP 1 Score: 57.4 bits (137), Expect = 1.120e-6
Identity = 30/71 (42.25%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    2 VLDVKPYTMKGLDEMEAIQKALQAAAEAPGGDLTIEQMEEDAENYLYNLVGILVHKGISKQGHYYSYIRDR 72
            VLD++PYT+KG+   E+ Q     + EA  G++         E+ LY+LVG++VH G +  GHYYS+I+DR
Sbjct: 1874 VLDMEPYTVKGMARRESPQ-----SDEASSGEMPDNSQPHTMED-LYHLVGVIVHSGQANAGHYYSFIKDR 1938          
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: A0A3R7CTB8_9STRA (USP domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7CTB8_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.780e-6
Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    3 LDVKPYTMKGLDEMEAIQKALQAAAEAPGGDLTIEQMEEDAENYLYNLVGILVHKGISKQGHYYSYIRDR 72
            LD+KPYT +GLDE     KA +   +  GG   ++    D E Y+Y L G+LVH G+++ GHYYS+I+D+
Sbjct:  917 LDMKPYTKRGLDE-----KAAEDVDDDIGG---MDDXXNDDE-YMYELRGVLVHAGVAQGGHYYSFIKDQ 977          
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: A0A7S1ZZ10_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZZ10_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 6.910e-6
Identity = 29/74 (39.19%), Postives = 46/74 (62.16%), Query Frame = 0
Query:    3 LDVKPYTMKGLDEMEAIQ---KALQAAAEAPGGDLTIEQMEE-DAENYLYNLVGILVHKGISKQGHYYSYIRDR 72
            L++K YT++GL+EME       +  A +    G+   + +   D E+Y Y L G+LVH G+++ GHYYS+I+DR
Sbjct:  432 LNMKRYTLEGLEEMERSNVDDSSADAGSMMDTGEHENDPLSSLDDEDYDYQLAGVLVHSGVAQGGHYYSFIKDR 505          
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: A0A7S1VJV7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VJV7_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 7.100e-6
Identity = 31/77 (40.26%), Postives = 50/77 (64.94%), Query Frame = 0
Query:    3 LDVKPYTMKGLDEMEAIQKALQAAAEAPGG---DLTIEQMEEDAENYLYNLVGILVHKGISKQGHYYSYIRDRRRNA 76
            L+++ YT++G+D   A +K   A ++ P     D T  ++  D + Y Y LVG+LVH G+++ GHYYS+I+DR +NA
Sbjct: 1665 LNMQRYTLEGID---AAEKKAAAESDDPAPMETDDTEPKVSADID-YEYKLVGVLVHAGVAQGGHYYSFIKDRSKNA 1737          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LIA1_ECTSI2.270e-3646.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKZ1_9PHAE9.880e-3343.96Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S4F1U3_CHRCT9.520e-932.26Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A7S1FNV3_9STRA1.110e-845.21Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A3R7BNW5_9STRA1.770e-742.86USP domain-containing protein n=15 Tax=Aphanomyces... [more]
A0A7S4HMV2_9EUKA2.390e-741.11Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Vannell... [more]
A0A8B7Z9Y1_ACAPL1.120e-642.25Ubiquitinyl hydrolase 1 n=8 Tax=Valvatida TaxID=41... [more]
A0A3R7CTB8_9STRA2.780e-644.29USP domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A7S1ZZ10_9STRA6.910e-639.19Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1VJV7_9STRA7.100e-640.26Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 33..145
e-value: 2.1E-10
score: 40.6
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 1..151
e-value: 1.6E-16
score: 62.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..103
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 48..65
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..151
score: 13.952997
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 2..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8689contigA-nodosum_M_contig8689:4090..6217 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8689.2.1mRNA_A-nodosum_M_contig8689.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8689 4058..6502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8689.2.1 ID=prot_A-nodosum_M_contig8689.2.1|Name=mRNA_A-nodosum_M_contig8689.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=152bp
MVLDVKPYTMKGLDEMEAIQKALQAAAEAPGGDLTIEQMEEDAENYLYNL
VGILVHKGISKQGHYYSYIRDRRRNAYQGGDGKSQVDGASGSSTNSNGSG
AGFMKSLGRDVSAGASSVGSEGVGEASWFKYDDDKVTRFDPREMETTCFG
V*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf