mRNA_A-nodosum_M_contig8689.2.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: D8LIA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIA1_ECTSI) HSP 1 Score: 164 bits (414), Expect = 2.850e-42 Identity = 94/190 (49.47%), Postives = 121/190 (63.68%), Query Frame = 3
Query: 3 VKLNDRCSFPMVLDVKPYTMKGLDEMEAIQKALQAAAEAPGGDLTIEQ-----------MEEDAENYLYNLVGILVHKGISKQGHYYSYIRDRRRNAYQGGDGKSQVDGASGSSTNSNGSGAGFMKSLG----------------RDVSAGASSV-GSEGV--GEASWFKYDDDKVTRFDPREMETTCFG 482
VKLNDRCSFPM+LD+KPYTMKG DE EA+++ALQAAAEA GGDLT+EQ M+EDA +YLYNL GILVH G+++ GHYYSYIRDR ++AY+ G G GA+ T + G ++ + V GA+ V GSE G+ +W+K++DD VT FDP+E+E CFG
Sbjct: 1541 VKLNDRCSFPMLLDLKPYTMKGTDEREAMEEALQAAAEASGGDLTLEQVTKLHEEQSAKMKEDAGDYLYNLAGILVHAGVAQGGHYYSYIRDRGKSAYEDGAGPGARAGAADDKTRGDAGDGGRKRAXXXXXXXXXXXXXXXXXXKGVEGGAAGVRGSESAAGGQGAWYKFEDDDVTPFDPQEIEACCFG 1730
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: A0A6H5KKZ1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ1_9PHAE) HSP 1 Score: 154 bits (388), Expect = 8.710e-39 Identity = 92/210 (43.81%), Postives = 121/210 (57.62%), Query Frame = 3
Query: 3 VKLNDRCSFPMVLDVKPYTMKGLDEMEAIQKALQAAAEAPGGDLTIEQ-----------MEEDAENYLYNLVGILVHKGISKQGHYYSYIRDRRRNAYQGGDGKSQ------------------VDGASGSSTNSNGSGAGFMKSLGRDVSAGASSV-GSEGV--GEASWFKYDDDKVTRFDPREMETTCFGV*PVPPR*ARSVCWCIVC 536
VKLNDRCSFPM+LD+KPYTMKG DE A+++ALQAAAEA GGDLT+EQ M+EDA +YLYNL GILVH G+++ GHYYSYIRDR ++AY+ G G VD + + V GA+ V GS+ G+ +W+K++DD VT FDP+E+E CFG + + C++C
Sbjct: 2343 VKLNDRCSFPMLLDLKPYTMKGTDERRAMEEALQAAAEASGGDLTLEQVTKLHEEQSAKMKEDAGDYLYNLAGILVHAGVAQGGHYYSYIRDRGKSAYEDGAGPGARARAADDKGRXXXXXXXXVDRKRAAGAERGAXXXXXXXXXXKGVQGGAAGVRGSDSAAGGQGAWYKFEDDDVTPFDPQEIEACCFGGTTLSTSVSNKRYNCLLC 2552
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: A0A7S2JVI8_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JVI8_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.020e-18 Identity = 57/169 (33.73%), Postives = 92/169 (54.44%), Query Frame = 3
Query: 3 VKLNDRCSFPMVLDVKPYTMKGLDEMEAIQKALQAAAEAPGGDLTIEQM---EEDA------ENYLYNLVGILVHKGISKQGHYYSYIRDRRRNAYQGGDGKSQVDGASGSSTNSNGSGAGFMKSLGRDVSAGASSVGSEGVGEASWFKYDDDKVTRFDPREMETTCFG 482
VKLN RC+F L++K YT+ G+ EA++K QA+ + GD++++ E DA E Y Y L G+++H G+++ GHYYSYI+DR R + G+ +G + S G+ V + A++ + W+++DD+ VT FDP +E+ CFG
Sbjct: 790 VKLNSRCAFGETLNMKQYTLAGI---EAMEKEQQASMQDSNGDVSMDDACDAENDADALLPDEEYEYKLAGVIIHAGVAQGGHYYSYIKDRTRQS---------------------GASSGDVTSEGKTVDSNAANE------DVKWYRFDDEDVTPFDPSSIESECFG 928
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: A0A7S1FNV3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FNV3_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 8.670e-18 Identity = 57/163 (34.97%), Postives = 86/163 (52.76%), Query Frame = 3
Query: 3 VKLNDRCSFPMVLDVKPYTMKGLDEMEAIQKALQAAAEAPGGDLTIEQMEEDA---ENYLYNLVGILVHKGISKQGHYYSYIRDRRRNAYQGGDGKSQVDGASGSSTNSNGSGAGFMKSLGRDVSAGASSVGSEGVGEASWFKYDDDKVTRFDPREMETTCFG 482
+KLN+RC+F L++K Y++KG++ MEA++K A E G D ++ DA E+Y YNLVG+LVH G+++ GHY+S I+DR SQ D D + A ++ W+++DDD VT FDP ++E+ CFG
Sbjct: 1912 MKLNNRCAFEETLNMKKYSLKGMEAMEAMEKGTHQAEEEDG-DTCMDIDPLDALPDEDYQYNLVGVLVHAGVAQGGHYFSVIKDR----------SSQED----------------------DTTTEAENI---------WYRFDDDDVTSFDPAQIESQCFG 2032
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: A0A7R9Z3C7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z3C7_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.210e-13 Identity = 52/171 (30.41%), Postives = 75/171 (43.86%), Query Frame = 3
Query: 3 VKLNDRCSFPMVLDVKPYTMKGLDEMEAIQKALQAAAEAPGGDLTIEQMEEDAE-----------NYLYNLVGILVHKGISKQGHYYSYIRDRRRNAYQGGDGKSQVDGASGSSTNSNGSGAGFMKSLGRDVSAGASSVGSEGVGEASWFKYDDDKVTRFDPREMETTCFG 482
VKLN RC+F L++K YT++G+ EA +KA + E G ++ ED E +Y YNL G+LVH G+++ GHYYS+I+DR G G W+++DD+ VT+FDP +E CFG
Sbjct: 698 VKLNSRCAFGQTLNMKKYTLEGV---EAREKA--SVGEQNGDSDSMMDTTEDGETSDPLSTLPDEDYEYNLAGVLVHAGVAQGGHYYSFIKDR---------------------------------------------FSPNGEGADKWYRFDDEDVTQFDPSSIEVECFG 818
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: A0A7S2EMP2_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EMP2_TRICV) HSP 1 Score: 76.3 bits (186), Expect = 3.090e-13 Identity = 51/171 (29.82%), Postives = 75/171 (43.86%), Query Frame = 3
Query: 3 VKLNDRCSFPMVLDVKPYTMKGLDEMEAIQKALQAAAEAPGGDL-TIEQMEEDA----------ENYLYNLVGILVHKGISKQGHYYSYIRDRRRNAYQGGDGKSQVDGASGSSTNSNGSGAGFMKSLGRDVSAGASSVGSEGVGEASWFKYDDDKVTRFDPREMETTCFG 482
VKLN RC+F L++K YT++G++ ME +A E G + ++ EE A E+Y Y L G+LVH G+++ GHYYS+I+DR + GD W+++DD+ VT FDP +E CFG
Sbjct: 62 VKLNSRCAFGQTLNMKKYTLEGVEAME------KAELEENGANSDSMMDTEEGAPPDPLDSLPDEDYEYKLAGVLVHAGVAQGGHYYSFIKDRSSPNGEAGD---------------------------------------------KWYRFDDEDVTPFDPSSIEVECFG 181
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: D0MTA4_PHYIT (Ubiquitin-specific protease, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MTA4_PHYIT) HSP 1 Score: 79.0 bits (193), Expect = 6.200e-13 Identity = 56/185 (30.27%), Postives = 69/185 (37.30%), Query Frame = 3
Query: 3 VKLNDRCSFPMVLDVKPYTMKGLDEMEAIQKALQAAAEAPGGDLTIEQMEEDAE-------------------------NYLYNLVGILVHKGISKQGHYYSYIRDRRRNAYQGGDGKSQVDGASGSSTNSNGSGAGFMKSLGRDVSAGASSVGSEGVGEASWFKYDDDKVTRFDPREMETTCFG 482
VKLN+RCSFPM L +KPYT G++E EA Q E + D++ NY Y L GILVH G+++ GHYYS+I D SE WFKYDD+ VT FDP +E CFG
Sbjct: 1839 VKLNNRCSFPMRLSMKPYTKAGIEEQEARSNLQQDRGETSADEDMASDDSSDSDEFMADVNGDTPAIPASSSASTKSDPNYEYRLKGILVHSGVAQGGHYYSFIYDHM----------------------------------------------SE-----KWFKYDDEDVTPFDPANIEAECFG 1972
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: A0A225WNK5_9STRA (Ubiquitin-specific protease n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WNK5_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 6.210e-13 Identity = 59/189 (31.22%), Postives = 74/189 (39.15%), Query Frame = 3
Query: 3 VKLNDRCSFPMVLDVKPYTMKGLDEMEAIQKALQ-----------AAAEAPGGDLTIEQMEEDAE------------------NYLYNLVGILVHKGISKQGHYYSYIRDRRRNAYQGGDGKSQVDGASGSSTNSNGSGAGFMKSLGRDVSAGASSVGSEGVGEASWFKYDDDKVTRFDPREMETTCFG 482
VKLN+RCSFPM L +KPYT G++E EA Q A+ ++ D + + DA NY Y L GILVH G+++ GHYYS+I D SE WFKYDD+ VT FDP +ET CFG
Sbjct: 1856 VKLNNRCSFPMRLSMKPYTKAGIEEQEARSNLQQEQEETSADEDMASDDSSDSDEFMTDVNGDAPSIPPSFSATPRSSVKSDPNYEYRLKGILVHSGVAQGGHYYSFIYDHL----------------------------------------------SE-----KWFKYDDEDVTPFDPANIETECFG 1993
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: G4ZD97_PHYSP (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=G4ZD97_PHYSP) HSP 1 Score: 78.2 bits (191), Expect = 1.130e-12 Identity = 57/186 (30.65%), Postives = 73/186 (39.25%), Query Frame = 3
Query: 3 VKLNDRCSFPMVLDVKPYTMKGLDEMEAIQKALQ-----------AAAEAPGGDLTIEQMEEDAE---------------NYLYNLVGILVHKGISKQGHYYSYIRDRRRNAYQGGDGKSQVDGASGSSTNSNGSGAGFMKSLGRDVSAGASSVGSEGVGEASWFKYDDDKVTRFDPREMETTCFG 482
VKLN+RCSFPM L +KPYT G++E EA + Q A+ ++ D + + D NY Y L GILVH G+++ GHYYS+I D V E WFKYDD+ VT FDP +E CFG
Sbjct: 1851 VKLNNRCSFPMRLSMKPYTKAGIEEQEARSTSQQEREDTSADEDMASDDSSDSDEFMADVNRDTPAIRTSSSSSSAQSDPNYEYRLKGILVHSGVAQGGHYYSFIYDH--------------------------------------------------VSE-KWFKYDDEDVTPFDPANIEAECFG 1985
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Match: A0A3R7BNW5_9STRA (USP domain-containing protein n=15 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BNW5_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.520e-12 Identity = 38/82 (46.34%), Postives = 55/82 (67.07%), Query Frame = 3
Query: 3 VKLNDRCSFPMVLDVKPYTMKGLDEMEAIQKALQAAAEAPGGDLTIEQMEEDAENYLYNLVGILVHKGISKQGHYYSYIRDR 248
VKLN+RC+FP+ LD+KPYT +GLDE AAE D+ +E+ + Y+Y L G+LVH G+++ GHYYS+I+D+
Sbjct: 1757 VKLNNRCAFPLKLDMKPYTKRGLDEK---------AAEDVDDDIGGMDDDENDDEYMYELRGVLVHAGVAQGGHYYSFIKDQ 1829 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8689.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig8689.2.1 >prot_A-nodosum_M_contig8689.2.1 ID=prot_A-nodosum_M_contig8689.2.1|Name=mRNA_A-nodosum_M_contig8689.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=152bp MVLDVKPYTMKGLDEMEAIQKALQAAAEAPGGDLTIEQMEEDAENYLYNLback to top mRNA from alignment at A-nodosum_M_contig8689:4058..6502+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig8689.2.1 ID=mRNA_A-nodosum_M_contig8689.2.1|Name=mRNA_A-nodosum_M_contig8689.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2445bp|location=Sequence derived from alignment at A-nodosum_M_contig8689:4058..6502+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig8689:4058..6502+ >mRNA_A-nodosum_M_contig8689.2.1 ID=mRNA_A-nodosum_M_contig8689.2.1|Name=mRNA_A-nodosum_M_contig8689.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=456bp|location=Sequence derived from alignment at A-nodosum_M_contig8689:4058..6502+ (Ascophyllum nodosum dioecious)back to top |