prot_A-nodosum_M_contig867.24.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig867.24.1
Unique Nameprot_A-nodosum_M_contig867.24.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length258
Homology
BLAST of mRNA_A-nodosum_M_contig867.24.1 vs. uniprot
Match: D7FYL0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL0_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 2.480e-48
Identity = 101/246 (41.06%), Postives = 146/246 (59.35%), Query Frame = 0
Query:   16 VFDDSSLVGEDLRVGAEAAFVCAAGAFFKMPPSEVVLSPEPE---STGDENGEVEAQTKHTAPTAGEKENSSAEDDPTSPAGEESNRVLDAIDDRLVTFSSEKGAAVRASGAVPHFRLHKVVAAAVSRRAFVVGAERGDEISDHLKRAITPSWVVIVDMEKTSAEFERAMAGQMCVVLHVDVDLACDETFYVTD-ENGKVVQGTKERVGRIHRLRLESNIGTPEEPKPPR-WKVIDLDNWLEGNSF 256
            +F+D    G D   GAEAAFV  A A FKM   +V  +P+P    +    +G  +   +    +AG ++    ++     + EE++RVL A+D  LV  SS+KG        VP++RLH+VVA A+ R+ F+ G +RGD++S     A++PS   ++      A+   A+AG + V   VDVDLACDETFYV D E G+++QG KE  GRIHR+RLES +   +  + P  WKVIDLD+WL+GN+F
Sbjct:  101 IFEDFCFKGVDFTAGAEAAFVTTAAALFKMRTLKV-RAPKPSVEAAAAGVDGAPKGGVEEDPASAGAEQEEEDKEKSAETSEEEADRVLAAVDKGLVALSSDKGG-------VPYYRLHRVVAKAIRRKKFIFGVQRGDDLSGRFTVAMSPSLEFVLQENNAFAQIRNALAGNVTVTFQVDVDLACDETFYVKDKETGEIIQGKKESSGRIHRVRLESCLLMEQAIEQPHIWKVIDLDDWLKGNAF 338          
BLAST of mRNA_A-nodosum_M_contig867.24.1 vs. uniprot
Match: A0A6H5JXD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXD5_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 8.050e-15
Identity = 69/240 (28.75%), Postives = 115/240 (47.92%), Query Frame = 0
Query:   31 AEAAFVCAAGAFFKMPPSEVVLSPEPESTGDENGEVEAQTKHTAPTAGEKENSSAEDDPTSPAGEESNRVLDAIDDRLVTFSSEKGAAVRASGAVPHFRLHKVVAAAVSRRAFVVGAERGD--------EI--SDHLKRAITPSWVVI--VDMEKTSAEFERAMAGQMCVVLHVDVDLACDETFYVTDENGK-VVQGTKERVGRIHRLRLESNIGTPEEPKPPRWKVIDLDNWLEGNSFW 257
            AE AFV  A   F+MP  +V+ +P  +  GDE       +  +      ++     D P     +      D +   L  F  +   A + S + P +RLH + +  +S    + GA+RGD        EI  S ++ +++      I    + K     ++ ++      + VDVD+ C ETF+V+D+  + +VQG+K    R HRLRLES+   P   +  +W V+DLD+W++GN+FW
Sbjct:  125 AEMAFVQVAAGVFQMPAHQVI-APLADGEGDEG----KSSSESGDRGRRRDGLPVWDIPEGALVD----PRDVMHKDLADFYVQAAVAAKVSRSTPFYRLHGLRSCEISNVNVLWGAQRGDLPEEGETIEIWGSKYVLKSVLEDIKAISRYRVSKDRDVLDKPLSSIRKTTVQVDVDIGCTETFFVSDDRTEEIVQGSKAFAVRKHRLRLESS---PFLKRDFQWSVVDLDDWMKGNTFW 352          
BLAST of mRNA_A-nodosum_M_contig867.24.1 vs. uniprot
Match: D8LFT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT8_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 1.980e-5
Identity = 40/162 (24.69%), Postives = 68/162 (41.98%), Query Frame = 0
Query:  108 LVTFSSEKGAAVRASGAVPHFRLHKVVAAAVSRRAFVVGAERGD--------EI--SDHLKRAITPSWVVI--VDMEKTSAEFERAMAGQMCVVLHVDVDLACDETFYVTDENGKVVQGTKERVGRIHRLRLESNIGTPEEPKPPRWKVIDLDNWLEGNSFW 257
            L  F  +   A + S + P +RLH   +  +S    + GA+RGD        EI  S ++ +++      I    + K  A  ++ ++      + VDVD+ C ETF+V+D   +                                +V+DLDNW++GN+FW
Sbjct:  210 LAEFYVQAAVAAKVSRSTPFYRLHGFTSCEISNVNVLWGAQRGDLPEEGETIEIWGSKYVLKSVLEDIKAISRYRVNKDRAGLDKPLSSIRKTTVQVDVDIGCTETFFVSDNRTE--------------------------------EVVDLDNWMKGNTFW 339          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig867.24.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYL0_ECTSI2.480e-4841.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JXD5_9PHAE8.050e-1528.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFT8_ECTSI1.980e-524.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig867contigA-nodosum_M_contig867:200358..211015 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig867.24.1mRNA_A-nodosum_M_contig867.24.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig867 199745..211128 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig867.24.1 ID=prot_A-nodosum_M_contig867.24.1|Name=mRNA_A-nodosum_M_contig867.24.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=258bp
MVQPESFITKVFLGLVFDDSSLVGEDLRVGAEAAFVCAAGAFFKMPPSEV
VLSPEPESTGDENGEVEAQTKHTAPTAGEKENSSAEDDPTSPAGEESNRV
LDAIDDRLVTFSSEKGAAVRASGAVPHFRLHKVVAAAVSRRAFVVGAERG
DEISDHLKRAITPSWVVIVDMEKTSAEFERAMAGQMCVVLHVDVDLACDE
TFYVTDENGKVVQGTKERVGRIHRLRLESNIGTPEEPKPPRWKVIDLDNW
LEGNSFW*
back to top