prot_A-nodosum_M_contig8649.6.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8649.6.1
Unique Nameprot_A-nodosum_M_contig8649.6.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length190
Homology
BLAST of mRNA_A-nodosum_M_contig8649.6.1 vs. uniprot
Match: A0A6H5JJG6_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG6_9PHAE)

HSP 1 Score: 305 bits (782), Expect = 8.960e-96
Identity = 149/203 (73.40%), Postives = 165/203 (81.28%), Query Frame = 0
Query:    1 ENHDGTDKQYVVLGMKDGGHLCSCRTLQELGLCCRHFWAAMRLSRKYKFHVGILNQHWLAEQGRKPTSEWPEGAKPIWTVAKNHTPLTEDEVQALLVSTV-------------GDGVRLKWNADNTTIESSLMKLKETEPTPQDRRYLYVDCLKEATAAVGLGVETVPPDALRALVQQFVQGVNTAGRIGSRTGISVGNPHVV 190
            ENHDGTDK+Y+VLGM DG HLCSCRTLQELGLCCRHFWAAMRLSR+YKFHVGILNQHWLAEQGRKPTSEWPEGAKP W VA NH  L+E E QA LV+T              G G  ++W+A N TIESSL++LKET PTPQDRR+LYVDCLKEATAAV LGVETVPP+ALRALV+QF QGV+ A RIGS  G++V NP VV
Sbjct:  638 ENHDGTDKRYIVLGMTDGSHLCSCRTLQELGLCCRHFWAAMRLSRRYKFHVGILNQHWLAEQGRKPTSEWPEGAKPTWAVALNHKALSEGEKQAPLVATGRLQCATEGDEGGGGAGAGVQWDAGNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPEALRALVRQFKQGVHQASRIGSSAGLAVANPAVV 840          
BLAST of mRNA_A-nodosum_M_contig8649.6.1 vs. uniprot
Match: D7FLA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLA8_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 1.930e-48
Identity = 90/143 (62.94%), Postives = 106/143 (74.13%), Query Frame = 0
Query:   61 EQGRKPTSEWPEGAKPIWTVAKNHTPLTEDEVQALLVSTV-------------GDGVRLKWNADNTTIESSLMKLKETEPTPQDRRYLYVDCLKEATAAVGLGVETVPPDALRALVQQFVQGVNTAGRIGSRTGISVGNPHVV 190
            ++GR+ T+EWPEGAKP W V KNH  L+E E QA LV+T              G G  ++W+A N TIESSL++LKET PTPQDRR+LYVDCLKEATAAV LGVETVPP+ALRALVQQF QGV+ A RIGS  G++V NP VV
Sbjct:  253 QRGRRATTEWPEGAKPKWAVTKNHEALSEGEQQAPLVATGRLQCATDGDKGGGGAGGGVQWDAGNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPEALRALVQQFKQGVHQASRIGSSAGLAVANPAVV 395          
BLAST of mRNA_A-nodosum_M_contig8649.6.1 vs. uniprot
Match: A0A6H5JBU5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBU5_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 1.200e-37
Identity = 72/146 (49.32%), Postives = 95/146 (65.07%), Query Frame = 0
Query:    1 ENHDGTDKQYVVLGMKDGGHLCSCRTLQELGLCCRHFWAAMRLSRKYKFHVGILNQHWLAEQGRKPTSEWPEGAKPIWTVAKNHTPLTEDEVQALLVSTVGDGVRLKWNA--DNTTIESSLMKLKETEPTPQDRRYLYVDCLKEAT 144
            E+  G   +Y+V  M+DG H+CSCRTLQELGLCCRHFW AMRLS K+KFHVGILN+HWL EQG +    WP   K  W VA  ++  ++D+      + VGD     W A  +N TIE+ L ++ +T  + QDRR L+V+ LK+ T
Sbjct:  354 ESRYGRVMRYIVCSMQDGSHICSCRTLQELGLCCRHFWQAMRLSPKFKFHVGILNRHWLTEQGLRELEAWPPECKQ-WMVALVNSDASKDDQVRPPTAMVGD----TWQAIPENATIETRLQRVAQTGQSSQDRRLLFVEMLKKTT 494          
BLAST of mRNA_A-nodosum_M_contig8649.6.1 vs. uniprot
Match: A0A6H5JCK5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK5_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 3.040e-36
Identity = 65/90 (72.22%), Postives = 76/90 (84.44%), Query Frame = 0
Query:  101 GDGVRLKWNADNTTIESSLMKLKETEPTPQDRRYLYVDCLKEATAAVGLGVETVPPDALRALVQQFVQGVNTAGRIGSRTGISVGNPHVV 190
            G G  ++W+A N TIESSL++LKET PTPQDRR+LYVDCLKEATAAV LGVETVPP+ALRALV+QF QGV+ A RIGS  G++V NP VV
Sbjct:    6 GAGAGVQWDAGNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPEALRALVRQFKQGVHQASRIGSSAGLAVANPAVV 95          
BLAST of mRNA_A-nodosum_M_contig8649.6.1 vs. uniprot
Match: A0A6H5JMX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMX3_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 3.300e-33
Identity = 65/91 (71.43%), Postives = 76/91 (83.52%), Query Frame = 0
Query:  101 GDGVRLKWNADNTTIESSLMKLKETEPTPQDRRYLYVDCLKEATAAVGLGVETVPPDALRALVQQFVQ-GVNTAGRIGSRTGISVGNPHVV 190
            G G  ++W+A N TIESSL++LKET PTPQDRR+LYVDCLKEATAAV LGVETVPP+ALRALV+QF Q GV+ A RIGS  G++V NP VV
Sbjct:  105 GAGAGVQWDAGNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPEALRALVRQFKQXGVHQASRIGSSAGLAVANPAVV 195          
BLAST of mRNA_A-nodosum_M_contig8649.6.1 vs. uniprot
Match: D8LU83_ECTSI (SWIM-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU83_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 6.490e-29
Identity = 63/149 (42.28%), Postives = 85/149 (57.05%), Query Frame = 0
Query:    1 ENHDGTDKQYVVLGMKDGGHLCSCRTLQELGLCCRHFWAAMRLSRKYKFHVGILNQHWLAEQGR-KPTSEWPEGAKPIWTVAKNHTPLTEDEVQALLVSTVGDGV---RLKWNA---DNTTIESSLMKLKETEPTPQDRRYLYVDCLKE 142
            E  D     Y+VL   DG HLC CRTLQ L L CRH WAAM  S +++FHVG+L++HWL E+ R  P  +WP+ A+P W V+  H      EV        G+GV     +W +    + T+++ L+ LKE  PT QDR+ LY D  K+
Sbjct:  497 EQRDDKAFDYLVLLFSDGSHLCQCRTLQTLRLFCRHVWAAMMYSPRFRFHVGLLHEHWLTEKARGTPQQDWPDVARPRWVVSNRHA---AREVDGAAGEGEGEGVGGCSGRWKSFVGSSQTVQTVLLDLKEKGPTDQDRQVLYADVTKK 642          
BLAST of mRNA_A-nodosum_M_contig8649.6.1 vs. uniprot
Match: A0A6H5JUZ2_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ2_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.070e-28
Identity = 74/188 (39.36%), Postives = 100/188 (53.19%), Query Frame = 0
Query:    1 ENHDGTDKQYVVLGMKDGGHLCSCRTLQELGLCCRHFWAAMRLSRKYKFHVGILNQHWLAEQGR-KPTSEWPEGAKPIWTVAKNHTPLTEDEVQALLVSTVGDGVRL---KWNA---DNTTIESSLMKLKETEPTPQDRRYLYVDCLKEATAAVGLGVETVPPDALRALVQQFVQGVNT-AGRIGSRT 180
            E  DG    Y+VL   DG HLC CRTLQ LGL CRH WAAM  S +++FH      HWL E+ R  P  +WP+ A+P W V+ ++      EV        G+GV     +W +    + T+++ L+ LKE  PT QDR+ LY D  K+   A  +  +   P    ALV QF+  VN  AG +G+ T
Sbjct:  596 EQRDGKAFDYLVLLFSDGSHLCQCRTLQTLGLFCRHVWAAMMHSPRFRFH------HWLTEKARGTPQQDWPDVARPRWVVSXSNRHAA-GEVDGAAGEGEGEGVGGCGGRWKSFVGSSQTVQTVLLDLKEKGPTYQDRKVLYADVTKKLGQAASILSDRFSPTVAVALVDQFLTMVNMQAGGVGTTT 776          
BLAST of mRNA_A-nodosum_M_contig8649.6.1 vs. uniprot
Match: A0A6H5JFD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD7_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 2.650e-25
Identity = 65/177 (36.72%), Postives = 90/177 (50.85%), Query Frame = 0
Query:    6 TDKQYVVLGMKDGGHLCSCRTLQELGLCCRHFWAAMRLSRKYKFHVGILNQHWLAEQGR-KPTSEWPEGAKPIWTVAKNHTPLTEDEVQALLVSTVGDGVRLKWNADNTTIESSLMKLKETEPTPQDRRYLYVDCLKEATAAVGLGVETVPPDALRALVQQFVQGVNT-AGRIGSRT 180
            T   Y+VL   D  HLC CRTLQ LGL CR  WAAM  S +++FHVG+L++HWL E+ R  P  +WP+ A+P W           D          G G        + T+++ ++ LKE  PT QDR+ +Y +  K+   A  +  +   P    A V QF+  VN  AG  G+ T
Sbjct:  296 TTFDYLVLLFSDVSHLCQCRTLQTLGLFCRQVWAAMMHSPRFRFHVGLLHEHWLTEKARGTPLHDWPDVARPRWEKWTGRRERERD----------GGG-----GXSSQTVQTVVLDLKEKGPTDQDRQVVYANVTKKLGQAASILSDKFSPTVAVARVDQFLATVNVQAGGAGATT 457          
BLAST of mRNA_A-nodosum_M_contig8649.6.1 vs. uniprot
Match: A0A6H5JNB0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB0_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.490e-24
Identity = 58/157 (36.94%), Postives = 81/157 (51.59%), Query Frame = 0
Query:    4 DGTDKQYVVLGMKDGGHLCSCRTLQELGLCCRHFWAAMRLSRKYKFHVGILNQHWLAEQGR-KPTSEWPEGAKPIWTVAKNHTPLTEDEVQALLVSTVGDGVRLKWNA-----------------DNTTIESSLMKLKETEPTPQDRRYLYVDCLKE 142
            DG    Y+VL   DG HLC CRT Q LGL CRH WAAM  S +++FHVG+L+QHWL E+ R  P  +WP+ A+P + V  +    T    +       G+                          + T++++L+ LKE EPT Q+R+ LY D  K+
Sbjct:  567 DGRTFDYLVLLFSDGSHLCQCRTFQTLGLFCRHVWAAMMYSPRFRFHVGLLHQHWLTEKARGTPLQDWPDVARPRFVVISDRHASTAGAKERF-EGAAGEXXXXXXXXXXXXXXXXXXXXXXXXXSSQTVQAALLDLKEKEPTDQERQVLYADVTKK 722          
BLAST of mRNA_A-nodosum_M_contig8649.6.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 2.260e-24
Identity = 60/141 (42.55%), Postives = 81/141 (57.45%), Query Frame = 0
Query:   52 GILNQHWLAEQGRKPTSEWPEGAKPIWTVAKNHTPLTEDEVQALLVSTVGDGVRLKWNA--DNTTIESSLMKLKETEPTPQDRRYLYVDCLKEATAAVGLGVETVPPDALRALVQQFVQGVNTAGRIGSRTGISVGNPHVV 190
            G + +HWL EQG +    WP   KP W VA  H+  ++D+        VGD     W A  ++ TIE+ L ++ +T  + QDRR LYV+ LK+ATAAV  GV+ VPPD +RA+VQ F   +N A  I S  G  +GNP  V
Sbjct:  412 GRVMRHWLTEQGLRELEAWPPECKPQWMVALVHSDASKDDQVRPPTVVVGD----TWQAIPEDATIETRLQRVAQTGQSCQDRRLLYVEMLKKATAAVSSGVQLVPPDTMRAIVQTFESSMNAAAMISSGQGAVLGNPQAV 548          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8649.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5JJG6_9PHAE8.960e-9673.40SWIM-type domain-containing protein n=2 Tax=Ectoca... [more]
D7FLA8_ECTSI1.930e-4862.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBU5_9PHAE1.200e-3749.32SWIM-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JCK5_9PHAE3.040e-3672.22Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMX3_9PHAE3.300e-3371.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU83_ECTSI6.490e-2942.28SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JUZ2_9PHAE1.070e-2839.36SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JFD7_9PHAE2.650e-2536.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNB0_9PHAE1.490e-2436.94SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JWW3_9PHAE2.260e-2442.55MULE domain-containing protein n=2 Tax=Ectocarpus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007527Zinc finger, SWIM-typePFAMPF04434SWIMcoord: 18..41
e-value: 4.7E-4
score: 19.8
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 10..45
score: 8.901567

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8649contigA-nodosum_M_contig8649:12613..13182 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8649.6.1mRNA_A-nodosum_M_contig8649.6.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8649 12613..13182 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8649.6.1 ID=prot_A-nodosum_M_contig8649.6.1|Name=mRNA_A-nodosum_M_contig8649.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=190bp
ENHDGTDKQYVVLGMKDGGHLCSCRTLQELGLCCRHFWAAMRLSRKYKFH
VGILNQHWLAEQGRKPTSEWPEGAKPIWTVAKNHTPLTEDEVQALLVSTV
GDGVRLKWNADNTTIESSLMKLKETEPTPQDRRYLYVDCLKEATAAVGLG
VETVPPDALRALVQQFVQGVNTAGRIGSRTGISVGNPHVV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007527Znf_SWIM