prot_A-nodosum_M_contig864.23.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig864.23.1
Unique Nameprot_A-nodosum_M_contig864.23.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length247
Homology
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: D7FXX4_ECTSI (Derlin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXX4_ECTSI)

HSP 1 Score: 409 bits (1052), Expect = 2.920e-143
Identity = 188/246 (76.42%), Postives = 219/246 (89.02%), Query Frame = 0
Query:    1 MNNAPADPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLICRGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVMHSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLCGQIPADRPRDVPGVFPAPDNGVDGGGHLHVD 246
            MNNAPADPLSWYYDIP+VTRVYLT AF+TTA+CQ+DA S+ KLF+SWPLIC+GQ+WRLVTNFF+FG++D++FLFHMYFLVRYSRLLEEG+FRGRTGDF+WFLLFCAS+M  +AP++ ++FLGRPLAFMMVYVWGRRNEHVRMN+LGMFPFTAPYL WVLL  + V+ SPL +DLLGIAVGH++YFLEFVYPEVA IRGWK KQLMRAP+ +QQLCGQ+PA   +DVP V P PD G    GHLH D
Sbjct:    1 MNNAPADPLSWYYDIPVVTRVYLTAAFVTTAMCQLDATSSTKLFFSWPLICKGQVWRLVTNFFFFGALDVHFLFHMYFLVRYSRLLEEGDFRGRTGDFVWFLLFCASLMIGAAPYLAMNFLGRPLAFMMVYVWGRRNEHVRMNLLGMFPFTAPYLPWVLLLLSAVLGSPLKSDLLGIAVGHLFYFLEFVYPEVANIRGWKWKQLMRAPRIVQQLCGQVPAVDRQDVPAVVPVPDVGQ---GHLHDD 243          
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: A0A7S2Y1F4_9STRA (Derlin n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1F4_9STRA)

HSP 1 Score: 290 bits (743), Expect = 5.280e-96
Identity = 146/257 (56.81%), Postives = 186/257 (72.37%), Query Frame = 0
Query:    6 ADPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLIC-RGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVM-HSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLCGQIPADRPRDVPGVFP---------APDNG---VDGG--GHLHVD 246
            ADP SWY +IPIV+R+YLT +F+TTA C +D +S   L+++  LI  +GQ+WR++TNFF+FG   L FLFHMYFLVRY RLLEEGEFRGRT DF+WFLL   ++MT++APFV + FLG  L FMMVYVWGR N+HVRM+ LG+FPFTAPYL WVLL F+V++ HSP   D++GI VGH+YYF EFV+PEVA+IR W+VK+++ AP  + +LCG         V   F          AP+NG    DGG  GHLH +
Sbjct:    4 ADPWSWYTEIPIVSRIYLTASFLTTAACALDIVSPYSLYFNVTLIFGKGQIWRILTNFFFFGLFSLDFLFHMYFLVRYCRLLEEGEFRGRTADFVWFLLVGGTLMTMAAPFVSVLFLGSSLTFMMVYVWGRLNQHVRMSFLGLFPFTAPYLPWVLLLFSVLLGHSP-AVDVIGIVVGHLYYFFEFVFPEVARIRRWRVKRVLAAPSFLHRLCGTYTDHNQPQVLNDFAEAQAQQNEDAPNNGFNVADGGQNGHLHQE 259          
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: T0PTH3_SAPDV (Derlin n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0PTH3_SAPDV)

HSP 1 Score: 284 bits (726), Expect = 1.140e-93
Identity = 135/240 (56.25%), Postives = 174/240 (72.50%), Query Frame = 0
Query:    7 DPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLIC-RGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVMHSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLCGQIPADRPRDVPGVF-PAPDNGVDGGGHLH 244
            DPL WYY+IP+++R+YLTGAF+TTA C ++ IS   L++++ LI  RGQ+WRL+TNF +FG   L FLFHMYFLVRYSR+LEEG FRGRT DFL+ +LF A+ M L APFV + FLG  L FMMVY+WGRRNEH R++ LG+FPFTAPYL WVLL F++V+ +    DL+GI VGH+YYF E VYP +A IRGW+V+++++ P  ++ LC   P       P V    P   V   GHLH
Sbjct:    3 DPLEWYYEIPVISRLYLTGAFLTTAACALELISPFSLYFNFNLIFYRGQVWRLLTNFLFFGLFSLDFLFHMYFLVRYSRMLEEGSFRGRTADFLYMILFGAAFMILVAPFVSVHFLGSSLTFMMVYIWGRRNEHTRLSFLGLFPFTAPYLPWVLLLFSMVLGNSATIDLIGIVVGHIYYFFEDVYPTIADIRGWRVRRVLKTPAFVKFLCN--PHAFTMGQPNVINDVPVENVGADGHLH 240          
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: A0A7R9UC87_9STRA (Derlin n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC87_9STRA)

HSP 1 Score: 278 bits (712), Expect = 1.470e-91
Identity = 132/213 (61.97%), Postives = 161/213 (75.59%), Query Frame = 0
Query:    4 APADPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLICRGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVM-HSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLC 215
            APA P SWY +IP V+R+YLT + + T  C +D IS   L+Y+W LI  GQLWRL TNF +FG+  L FLFHMYFLVRYSRLLEE EFRGRT DF + LLF AS+M   APFV I FLG  L+FMMVYVW RRNEHVRM+  G+ PF APYL WVLLGF+ ++ HSP   DL+GIAVGH+YYFLEFV+P VA IRGW+ +++++ P  +Q +C
Sbjct:   25 APASPWSWYAEIPPVSRLYLTLSVLVTLACAVDLISPFALYYNWSLISEGQLWRLFTNFLFFGTFGLDFLFHMYFLVRYSRLLEENEFRGRTADFAFMLLFGASLMLCVAPFVHIHFLGSSLSFMMVYVWARRNEHVRMSFFGVVPFNAPYLPWVLLGFSTLLGHSP-TIDLIGIAVGHIYYFLEFVFPAVASIRGWQTRKVLQTPAVLQYVC 236          
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: A0A485LAJ1_9STRA (Derlin n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LAJ1_9STRA)

HSP 1 Score: 279 bits (713), Expect = 4.050e-91
Identity = 131/230 (56.96%), Postives = 166/230 (72.17%), Query Frame = 0
Query:    7 DPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLIC-RGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVMHSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLCGQIPADRPRDVPGVFPAPDN 235
            DPL WYY+IPI++R+YLTGAF+TTA C ++ IS   L++++ LI  RGQ+WRL+TNF +FG   L FLFHMYFLVRYSR+LEEG FRGRT DFL+ LL  A  M L APFV + FLG  L FMMVY+WGRRNEH R++ LG+FPFTAPYL WVLL F++V+ +    DL+GI VGH+YYF E VYP +A IRGW+V++++  P  ++ LC          V    P  DN
Sbjct:   36 DPLEWYYEIPIISRLYLTGAFLTTAACALELISPFSLYFNFNLIFYRGQVWRLLTNFLFFGLFSLDFLFHMYFLVRYSRMLEEGSFRGRTADFLYMLLLGAFFMILVAPFVSVHFLGSSLTFMMVYIWGRRNEHTRLSFLGLFPFTAPYLPWVLLLFSMVLGNSATIDLIGIVVGHIYYFFEDVYPAIADIRGWRVRRVLETPTFVKFLCNPQAFTNQPPVVNDIPVVDN 265          
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: F0VYR4_9STRA (Derlin n=3 Tax=Albugo TaxID=65356 RepID=F0VYR4_9STRA)

HSP 1 Score: 278 bits (710), Expect = 1.830e-90
Identity = 133/240 (55.42%), Postives = 171/240 (71.25%), Query Frame = 0
Query:    7 DPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLIC-RGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVMHSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLCGQIPADRPRDVPGVFPAPDNGVD-GGGHLH 244
            DPL WYYDIPI++R+YLTG F+TTA C +D IS   L+Y++ LI  +GQ+WRLV+NF +FG   L FLFHMYF+VRY RLLEEG FR R  D+++ LLF A++M L APFV + FLG  L FMMVY+WGRRN  VRM+ LG+FPFTAPYL WVLL F++ + +    DL+GI VGH YYFLE +YP +A IRGWK+K+ +  P+ ++ LC       P+ V   + A  N +  GG HLH
Sbjct:   61 DPLEWYYDIPIISRLYLTGCFLTTASCALDLISPFSLYYNFNLIFYKGQVWRLVSNFLFFGLFSLDFLFHMYFVVRYCRLLEEGSFRNRPADYVYMLLFGAALMILVAPFVSVHFLGSSLTFMMVYIWGRRNSDVRMSFLGLFPFTAPYLPWVLLSFSIALGNSATTDLIGIFVGHTYYFLEDIYPSIAAIRGWKIKRPLTTPRILKYLCD------PQAVTPQYNAVPNVIGLGGNHLH 294          
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: A0A835Z6W2_9STRA (Derlin n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6W2_9STRA)

HSP 1 Score: 276 bits (707), Expect = 1.940e-90
Identity = 128/231 (55.41%), Postives = 172/231 (74.46%), Query Frame = 0
Query:    1 MNNAPADPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLICRGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVMHSP--LNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLCGQ---IPADRPRDV 226
            M+    DPL WYY+IP V+R Y+T AF+TTAL  +D +S  + F +W L+ +GQ WRL+T F +FG++ L FLFHMYFL RY RLLEEGEF  +T DF++FLLF A +M  + P V + FLG  L+FMMVYVWGRRNEHVRM++ G+ PFTAPYL WVLL  +V++++   L+ DLLGI VGH+YYFL F+YPEVA IRGW++++++  P+ +Q LCG+     A++PR V
Sbjct:    1 MDGNAGDPLQWYYEIPPVSRTYMTAAFVTTALTALDLVSPIQFFLNWKLVMQGQAWRLLTTFLFFGTLSLDFLFHMYFLARYCRLLEEGEFHRKTSDFVFFLLFGAVLMLAAQPLVSLPFLGSSLSFMMVYVWGRRNEHVRMSLFGLLPFTAPYLPWVLLAVSVLVNNSGALSTDLLGIGVGHMYYFLAFIYPEVAAIRGWRLRRVIHTPRLLQVLCGERALAHAEQPRIV 231          
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: A0A7S2EGE3_TRICV (Derlin n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S2EGE3_TRICV)

HSP 1 Score: 275 bits (703), Expect = 2.440e-90
Identity = 124/211 (58.77%), Postives = 163/211 (77.25%), Query Frame = 0
Query:    7 DPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLI-CRGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVMHSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLCG 216
            D +SWY DIP+V+R+Y TGAF+TTA C +D IS   L+++W LI  +GQ+WRL T + +FG   + FLFHMYFLVRY RLLEEG+FRGRT +F+  LLF  ++MTL APFV + FLG  L FMM YVWGRRNE VRM+ LG+F F APYL WV+LGF+V++ +P+  D++GI VGH YYFLE+VYP +A+IRGWKV+++M  P+ +  +CG
Sbjct:   16 DFMSWYMDIPVVSRLYFTGAFLTTAGCALDIISPFSLYFNWDLIFSQGQIWRLFTTYLFFGMFSIDFLFHMYFLVRYCRLLEEGDFRGRTANFVLLLLFGITMMTLVAPFVSVHFLGSSLTFMMTYVWGRRNEDVRMSFLGVFSFKAPYLPWVMLGFSVLLGNPVTIDVVGILVGHTYYFLEYVYPVIAEIRGWKVRRIMEPPRLLHWICG 226          
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: A0A0P0YV63_9STRA (Derlin n=1 Tax=Nitzschia sp. IriIs04 TaxID=1444690 RepID=A0A0P0YV63_9STRA)

HSP 1 Score: 273 bits (699), Expect = 1.210e-89
Identity = 117/219 (53.42%), Postives = 164/219 (74.89%), Query Frame = 0
Query:    4 APADPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLICRGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVMHSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLCGQIPADR 222
            A  D LSWY  IP+++R+YLTGA +TTA C ++  +   L++SW L+ +GQ+WRL+T++ +FG+  + F+FHMYFL+RYSR LEEGEFRG+T  +LW L+F    ++  A +  I FLG  L FMM+YVWGRRNE V+M+  G   F APYL WV+LGF+V+M +P++ DL+GI VGHVYYFL+FVYP VA IRGWK++++M  P  +Q +CG +PA++
Sbjct:   16 AEVDVLSWYMGIPVISRLYLTGALLTTAACAVEFTTPYSLYFSWDLVFKGQVWRLITSYLFFGAFSIDFMFHMYFLIRYSRFLEEGEFRGQTAKYLWMLMFGICCISGIAVYTNIPFLGNALTFMMLYVWGRRNESVKMSFFGFLQFNAPYLPWVMLGFSVLMGNPISTDLIGIVVGHVYYFLDFVYPVVADIRGWKMRKIMEPPTVLQWMCGDMPANQ 234          
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: A0A225VPV8_9STRA (Derlin n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A225VPV8_9STRA)

HSP 1 Score: 271 bits (693), Expect = 9.870e-89
Identity = 124/215 (57.67%), Postives = 160/215 (74.42%), Query Frame = 0
Query:    7 DPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLIC-RGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVMHSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLCGQIPA 220
            DPL WYY+IP+V+R+YLTG+F+TT  C +D +S   L++++ LI  +GQ+WRL TNF +FG   L FLFHMYF+VRY RLLEEG FRGRT DF++ LL  A  M + APFV I FLG  L FMMVY+WGRRNEHVRM+ LG+FPFTAPYL WVL  F++++ +    DL+GI VGH+YYFLE VYP +A IRGWK ++ +  P+ I+ +    PA
Sbjct:    3 DPLEWYYEIPVVSRLYLTGSFLTTTACALDLVSPFSLYFNFNLIFFKGQVWRLATNFMFFGLFSLDFLFHMYFVVRYCRLLEEGSFRGRTADFVYMLLLGAVFMIVLAPFVNIHFLGSSLTFMMVYLWGRRNEHVRMSFLGLFPFTAPYLPWVLFSFSILLGNSATTDLIGIIVGHIYYFLEDVYPTIASIRGWKTQRPLETPRIIRYMFDPRPA 217          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXX4_ECTSI2.920e-14376.42Derlin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXX4_... [more]
A0A7S2Y1F4_9STRA5.280e-9656.81Derlin n=2 Tax=Fibrocapsa japonica TaxID=94617 Rep... [more]
T0PTH3_SAPDV1.140e-9356.25Derlin n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0... [more]
A0A7R9UC87_9STRA1.470e-9161.97Derlin n=1 Tax=Pinguiococcus pyrenoidosus TaxID=17... [more]
A0A485LAJ1_9STRA4.050e-9156.96Derlin n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0... [more]
F0VYR4_9STRA1.830e-9055.42Derlin n=3 Tax=Albugo TaxID=65356 RepID=F0VYR4_9ST... [more]
A0A835Z6W2_9STRA1.940e-9055.41Derlin n=2 Tax=Tribonema minus TaxID=303371 RepID=... [more]
A0A7S2EGE3_TRICV2.440e-9058.77Derlin n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7... [more]
A0A0P0YV63_9STRA1.210e-8953.42Derlin n=1 Tax=Nitzschia sp. IriIs04 TaxID=1444690... [more]
A0A225VPV8_9STRA9.870e-8957.67Derlin n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007599DerlinPFAMPF04511DER1coord: 15..193
e-value: 2.1E-55
score: 187.6
NoneNo IPR availablePANTHERPTHR11009DER1-LIKE PROTEIN, DERLINcoord: 10..218
IPR035952Rhomboid-like superfamilySUPERFAMILY144091Rhomboid-likecoord: 13..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig864contigA-nodosum_M_contig864:280380..299335 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig864.23.1mRNA_A-nodosum_M_contig864.23.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig864 279584..299484 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig864.23.1 ID=prot_A-nodosum_M_contig864.23.1|Name=mRNA_A-nodosum_M_contig864.23.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=247bp
MNNAPADPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLI
CRGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLW
FLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPF
TAPYLAWVLLGFNVVMHSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWK
VKQLMRAPKAIQQLCGQIPADRPRDVPGVFPAPDNGVDGGGHLHVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007599DER1
IPR035952Rhomboid-like_sf