prot_A-nodosum_M_contig863.18.1 (polypeptide) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig863.18.1 vs. uniprot
Match: A0A438HF44_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HF44_VITVI) HSP 1 Score: 129 bits (323), Expect = 2.590e-33 Identity = 73/178 (41.01%), Postives = 108/178 (60.67%), Query Frame = 0
Query: 1 MRNRDVGTLKLDQHRYVRTVASKFNVEKTSTLTAAV--GEKPPSKDDAPQTEAETEEMRITPYREAVGALMWAATMTRPDVANAAHQLGKFNDNPGPVHWRAAKRALQYLRRTKDVGITYEGTLGSCAKLSAKVDADFATCPDTRRSVSGGAVILGGGAISWFSRGQKITAAASSESE 176
+R+R G LKL Q Y+ + +FN+ + A + G+K SK PQ + E EEM+ PY VG+LM+A TRPD+A LG++ NPG HW+AAK+ L+YL+ TKD+ +TY+ T S + DADFA C D ++S +G ++ GGA+SW S Q +TA+++ E+E
Sbjct: 93 LRDRANGVLKLSQRAYIERILKRFNMHNCKSTKAPIVKGDKF-SKAQCPQNDDEREEMKTIPYSSVVGSLMYAQVCTRPDIAFVVGMLGRYLSNPGSQHWKAAKKVLRYLQGTKDLMLTYQRT--SLLDVVGFCDADFAGCIDDKKSTTGYIFMMAGGAVSWKSVKQTLTASSTMEAE 267
BLAST of mRNA_A-nodosum_M_contig863.18.1 vs. uniprot
Match: A0A438BMD3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BMD3_VITVI) HSP 1 Score: 127 bits (319), Expect = 1.290e-32 Identity = 72/178 (40.45%), Postives = 107/178 (60.11%), Query Frame = 0
Query: 1 MRNRDVGTLKLDQHRYVRTVASKFNVEKTSTLTAAV--GEKPPSKDDAPQTEAETEEMRITPYREAVGALMWAATMTRPDVANAAHQLGKFNDNPGPVHWRAAKRALQYLRRTKDVGITYEGTLGSCAKLSAKVDADFATCPDTRRSVSGGAVILGGGAISWFSRGQKITAAASSESE 176
+R+R G KL Q Y+ + +FN+ + A + G+K SK PQ + E EEM+ PY VG+LM+A TRPD+A LG++ NPG HW+AAK+ L+YL+ TKD+ +TY+ T S + DADFA C D ++S +G ++ GGA+SW S Q +TA+++ E+E
Sbjct: 23 LRDRANGVFKLSQRAYIEKILKRFNMHNCKSTKAPIVKGDKF-SKAQCPQNDDEREEMKTIPYSSVVGSLMYAQVCTRPDIAFVVGMLGRYLSNPGSQHWKAAKKVLRYLQGTKDLMLTYQRT--SLLDVVGFCDADFAGCIDDKKSTTGYIFMMAGGAVSWKSVKQTLTASSTMEAE 197
BLAST of mRNA_A-nodosum_M_contig863.18.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE) HSP 1 Score: 127 bits (318), Expect = 2.920e-32 Identity = 77/177 (43.50%), Postives = 103/177 (58.19%), Query Frame = 0
Query: 2 RNRDVGTLKLDQHRYVRTVASKFNVEKTSTLTAAVGEKPPSKDDAPQTEAETEEMRITPYREAVGALMWAATMTRPDVANAAHQLGKFNDNPGPVHWRAAKRALQYLRRTKDVGITYEGTLGSCAKLSAKV--DADFATCPDTRRSVSGGAVILGGGAISWFSRGQKITAAASSESE 176
R+ D GTLK+ Q Y + +F VE + VG K D + EE+ P+RE +G+LMW AT TRPD+ANA + ++ +P +HWRA L Y+ RT D GIT+ GS A LS +V DAD+A+ RRSVSGG V+ GGG ISWFSR QK +++E+E
Sbjct: 64 RDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGMKLSEFD-------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRR--GSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAE 231
BLAST of mRNA_A-nodosum_M_contig863.18.1 vs. uniprot
Match: A0A438JRX8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JRX8_VITVI) HSP 1 Score: 129 bits (325), Expect = 4.120e-32 Identity = 73/178 (41.01%), Postives = 109/178 (61.24%), Query Frame = 0
Query: 1 MRNRDVGTLKLDQHRYVRTVASKFNVEKTSTLTAAV--GEKPPSKDDAPQTEAETEEMRITPYREAVGALMWAATMTRPDVANAAHQLGKFNDNPGPVHWRAAKRALQYLRRTKDVGITYEGTLGSCAKLSAKVDADFATCPDTRRSVSGGAVILGGGAISWFSRGQKITAAASSESE 176
+R+R G LKL Q Y+ + +FN+ + A++ G+K SK PQ + E EEM+ PY VG+LM+A TRPD+A LG++ NPG HW+AAK+ L+YL+ TKD+ +TY+ T S + DADFA C D ++S +G ++ GGA+SW S Q +TA+++ E+E
Sbjct: 23 LRDRANGVLKLSQRAYIERILKRFNMHNCKSTKASIVKGDKF-SKAQCPQNDDEREEMKTIPYSSVVGSLMYAQVCTRPDIAFVVGMLGRYLSNPGSQHWKAAKKVLRYLQGTKDLMLTYQRT--SLLDVVGFCDADFAGCIDDKKSTTGYIFMMAGGAVSWKSVKQTLTASSTMEAE 197
BLAST of mRNA_A-nodosum_M_contig863.18.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 127 bits (320), Expect = 9.410e-32 Identity = 77/177 (43.50%), Postives = 104/177 (58.76%), Query Frame = 0
Query: 2 RNRDVGTLKLDQHRYVRTVASKFNVEKTSTLTAAVGEKPPSKDDAPQTEAETEEMRITPYREAVGALMWAATMTRPDVANAAHQLGKFNDNPGPVHWRAAKRALQYLRRTKDVGITYEGTLGSCAKLSAKV--DADFATCPDTRRSVSGGAVILGGGAISWFSRGQKITAAASSESE 176
R+ D GTLK+ Q Y + +F VE + VG K D + EE+ P+RE +G+LMW AT TRPD+ANA + ++ +P +HWRA L Y+ RT D+GIT+ GS A LS +V DAD+A+ RRSVSGG V+ GGG ISWFSR QK +++E+E
Sbjct: 165 RDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFD-------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRR--GSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAE 332
BLAST of mRNA_A-nodosum_M_contig863.18.1 vs. uniprot
Match: A5BJG5_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Vitis vinifera TaxID=29760 RepID=A5BJG5_VITVI) HSP 1 Score: 125 bits (313), Expect = 2.650e-31 Identity = 72/178 (40.45%), Postives = 107/178 (60.11%), Query Frame = 0
Query: 1 MRNRDVGTLKLDQHRYVRTVASKFNVEKTSTLTAAV--GEKPPSKDDAPQTEAETEEMRITPYREAVGALMWAATMTRPDVANAAHQLGKFNDNPGPVHWRAAKRALQYLRRTKDVGITYEGTLGSCAKLSAKVDADFATCPDTRRSVSGGAVILGGGAISWFSRGQKITAAASSESE 176
+R+R G LKL Q Y+ + +FN+ + A + G+K SK PQ + E EEM+ PY VG+LM+A T PD+A LG++ NPG HW+AAK+ L+YL+ TKD+ +TY+ T S + DADFA C D ++S +G ++ GGA+SW S Q +TA+++ E+E
Sbjct: 73 LRDRANGVLKLSQRVYIERILKRFNMHNCKSTKAPIVKGDKF-SKAQCPQNDDEREEMKTIPYSSVVGSLMYAQVCTCPDIAFVVGMLGRYLSNPGSQHWKAAKKVLRYLQGTKDLMLTYQRT--SLLDVVGFCDADFAGCIDDKKSTTGYIFMMAGGAVSWKSVKQTLTASSTMEAE 247
BLAST of mRNA_A-nodosum_M_contig863.18.1 vs. uniprot
Match: A0A438BPS5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BPS5_VITVI) HSP 1 Score: 129 bits (323), Expect = 2.680e-31 Identity = 73/178 (41.01%), Postives = 108/178 (60.67%), Query Frame = 0
Query: 1 MRNRDVGTLKLDQHRYVRTVASKFNVEKTSTLTAAV--GEKPPSKDDAPQTEAETEEMRITPYREAVGALMWAATMTRPDVANAAHQLGKFNDNPGPVHWRAAKRALQYLRRTKDVGITYEGTLGSCAKLSAKVDADFATCPDTRRSVSGGAVILGGGAISWFSRGQKITAAASSESE 176
+R+R G LKL Q Y+ + +FN+ + A + G+K SK PQ + E EEM+ PY VG+LM+A TRPD+A LG++ NPG HW+AAK+ L+YL+ TKD+ +TY+ T S + DADFA C D ++S +G ++ GGA+SW S Q +TA+++ E+E
Sbjct: 577 LRDRANGVLKLSQRAYIERILKRFNMHNCKSTKAPIVKGDKF-SKAQCPQNDDEREEMKTIPYSSVVGSLMYAQVCTRPDIAFVVGMLGRYLSNPGSQHWKAAKKVLRYLQGTKDLMLTYQRT--SLLDVVGFCDADFAGCIDDKKSTTGYIFMMAGGAVSWKSVKQTLTASSTMEAE 751
BLAST of mRNA_A-nodosum_M_contig863.18.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 127 bits (320), Expect = 4.380e-31 Identity = 77/177 (43.50%), Postives = 104/177 (58.76%), Query Frame = 0
Query: 2 RNRDVGTLKLDQHRYVRTVASKFNVEKTSTLTAAVGEKPPSKDDAPQTEAETEEMRITPYREAVGALMWAATMTRPDVANAAHQLGKFNDNPGPVHWRAAKRALQYLRRTKDVGITYEGTLGSCAKLSAKV--DADFATCPDTRRSVSGGAVILGGGAISWFSRGQKITAAASSESE 176
R+ D GTLK+ Q Y + +F VE + VG K D + EE+ P+RE +G+LMW AT TRPD+ANA + ++ +P +HWRA L Y+ RT D+GIT+ GS A LS +V DAD+A+ RRSVSGG V+ GGG ISWFSR QK +++E+E
Sbjct: 339 RDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFD-------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRR--GSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAE 506
BLAST of mRNA_A-nodosum_M_contig863.18.1 vs. uniprot
Match: A0A438BZI3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BZI3_VITVI) HSP 1 Score: 127 bits (320), Expect = 4.970e-31 Identity = 73/178 (41.01%), Postives = 107/178 (60.11%), Query Frame = 0
Query: 1 MRNRDVGTLKLDQHRYVRTVASKFNVEKTSTLTAAV--GEKPPSKDDAPQTEAETEEMRITPYREAVGALMWAATMTRPDVANAAHQLGKFNDNPGPVHWRAAKRALQYLRRTKDVGITYEGTLGSCAKLSAKVDADFATCPDTRRSVSGGAVILGGGAISWFSRGQKITAAASSESE 176
+R+R G LKL Q Y+ + +FN+ A + G+K SK PQ + E EEM+ PY VG+LM+A TRPD+A LG++ NPG HW+AAK+ L+YL+ TKD+ +TY+ T S + DADFA C D ++S +G ++ GGA+SW S Q +TA+++ E+E
Sbjct: 360 LRDRANGVLKLSQRAYIEKILKRFNMHNCKFTKAPIVKGDKF-SKAQCPQNDDEREEMKTIPYSSVVGSLMYAQVCTRPDIAFVVGMLGRYLSNPGSQHWKAAKKVLRYLQGTKDLMLTYQRT--SLLDVVGFCDADFAGCIDDKKSTTGYIFMMAGGAVSWKSVKQTLTASSTMEAE 534
BLAST of mRNA_A-nodosum_M_contig863.18.1 vs. uniprot
Match: A0A6G0X7I6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X7I6_9STRA) HSP 1 Score: 128 bits (321), Expect = 5.310e-31 Identity = 78/177 (44.07%), Postives = 102/177 (57.63%), Query Frame = 0
Query: 2 RNRDVGTLKLDQHRYVRTVASKFNVEKTSTL-TAAVGEKPPSKDDAPQTEAETEEMRITPYREAVGALMWAATMTRPDVANAAHQLGKFNDNPGPVHWRAAKRALQYLRRTKDVGITYEGTLGSCAK-LSAKVDADFATCPDTRRSVSGGAVILGGGAISWFSRGQKITAAASSESE 176
RNR TL L Q RY TV +F++ ++ + T K SK T + M PYR VG+LM+ A TRPD+A HQL +F DNPGP HWRAAKRAL+YL T+ G+ G+ LSA VD D+A CPDTRR VSG ++ G ISW ++ Q I +++E+E
Sbjct: 1420 RNRSERTLFLHQTRYCETVVERFDMASSNPVHTPFESSKTLSKSQCATTPEDVSFMASKPYRSLVGSLMYLAMGTRPDLAFPLHQLSQFLDNPGPAHWRAAKRALRYLNGTRSRGLLLGGSDSVHNPFLSAYVDEDYANCPDTRRCVSGYVLLFLGSPISWLAKKQNIVTLSTTEAE 1596 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig863.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig863.18.1 ID=prot_A-nodosum_M_contig863.18.1|Name=mRNA_A-nodosum_M_contig863.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=177bpback to top |