prot_A-nodosum_M_contig8604.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8604.1.1
Unique Nameprot_A-nodosum_M_contig8604.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length111
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig8604.1.1 vs. uniprot
Match: F6MHT6_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=F6MHT6_SACJA)

HSP 1 Score: 106 bits (265), Expect = 8.690e-26
Identity = 46/79 (58.23%), Postives = 62/79 (78.48%), Query Frame = 0 
Query:   25 AEWTYRRTATGGGEPFGPSNWFQGFPDCGGTAQSPINLAASTHAVVESTLFDLQFSPHTCASGDLSFIANERVWEVLFG 103
            AEWTYRRT+T G +P+GPS+W +G+PDCG  AQSPI+LAA    VV+ + ++L+F P+ C S +L F A+ERVWE+LFG
Sbjct:   40 AEWTYRRTSTNGQQPYGPSDWHKGYPDCGKKAQSPIDLAADLETVVKGSAYELKFYPNECKSDELLFQADERVWEILFG 118
[Close]
BLAST of mRNA_A-nodosum_M_contig8604.1.1 vs. uniprot
Match: D8LB10_ECTSI (Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB10_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 1.530e-14
Identity = 36/85 (42.35%), Postives = 47/85 (55.29%), Query Frame = 0 
Query:   25 AEWTYRRTATGGGEPFGPSNWFQGFPDCGGTAQSPINLAASTHAVVESTLFDLQFSPHTCASGDLSFIANERVWEVLFGIVRSRP 109
            AEWTYR T   G EP+GP +W+ G+PDC GT Q+PIN+AA            + F P  C S +L F ++  VW+V F      P
Sbjct:   45 AEWTYRATGVVGEEPYGPDDWYLGYPDCAGTKQTPINIAADVMGTATMQEQAIAFFPSECNSTELVFKSDFAVWQVDFSGCTDAP 129
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8604.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
F6MHT6_SACJA8.690e-2658.23Carbonic anhydrase n=1 Tax=Saccharina japonica Tax... [more]
D8LB10_ECTSI1.530e-1442.35Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001148Alpha carbonic anhydrase domainPFAMPF00194Carb_anhydrasecoord: 41..85
e-value: 1.1E-5
score: 25.2
IPR001148Alpha carbonic anhydrase domainPROSITEPS51144ALPHA_CA_2coord: 25..110
score: 11.35181
IPR036398Alpha carbonic anhydrase domain superfamilyGENE3D3.10.200.10Alpha carbonic anhydrasecoord: 22..107
e-value: 1.3E-8
score: 36.5
IPR036398Alpha carbonic anhydrase domain superfamilySUPERFAMILY51069Carbonic anhydrasecoord: 37..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8604contigA-nodosum_M_contig8604:20627..23486 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8604.1.1mRNA_A-nodosum_M_contig8604.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8604 17850..23543 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8604.1.1 ID=prot_A-nodosum_M_contig8604.1.1|Name=mRNA_A-nodosum_M_contig8604.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=111bp
MSRFVLLAVSLLAYDAVVHVSAQPAEWTYRRTATGGGEPFGPSNWFQGFP
DCGGTAQSPINLAASTHAVVESTLFDLQFSPHTCASGDLSFIANERVWEV
LFGIVRSRPL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001148CA_dom
IPR036398CA_dom_sf