mRNA_A-nodosum_M_contig8604.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig8604.1.1 vs. uniprot
Match: F6MHT6_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=F6MHT6_SACJA) HSP 1 Score: 249 bits (635), Expect = 1.440e-73 Identity = 118/172 (68.60%), Postives = 135/172 (78.49%), Query Frame = 3
Query: 360 FRDCAQQASLSFNSETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHLKAGTADELLVVGVLFDVSEYGTNVEIQPLWDVLDIGAASTTASFETRIYDLIPPNKVFSHYTGSLTTPPCTEGVTWIVMNEPTIISKMQLDEFRKSVALFPDSKVDEEGNTNRPYQPLNGRDLFLV 875
F C+ + F E YNL+QIHIHSPSEH IGGS +AEIHWVH+K GT D+LLVVGVLFD ++YG+NVEI+ LWDVLDIG +T F TRIYD++P N VFSHY GSLTTPPCTEGV WIVM++P +SKMQLDEFR SVALF DSKVDE GNTNRP Q LN R +F V
Sbjct: 117 FGGCSDVPHVEFKGERYNLLQIHIHSPSEHMIGGSEHSAEIHWVHVKEGTEDQLLVVGVLFDTTDYGSNVEIEHLWDVLDIGETTTKEVFTTRIYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMSKMQLDEFRTSVALFDDSKVDEHGNTNRPGQSLNDRKIFFV 288
BLAST of mRNA_A-nodosum_M_contig8604.1.1 vs. uniprot
Match: Q9SMD6_9PHAE (Carbonic anhydrase alpha type (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9SMD6_9PHAE) HSP 1 Score: 212 bits (539), Expect = 1.210e-61 Identity = 99/141 (70.21%), Postives = 115/141 (81.56%), Query Frame = 3
Query: 453 IGGSLRAAEIHWVHLKAGTADELLVVGVLFDVSEYGTNVEIQPLWDVLDIGAASTTASFETRIYDLIPPNKVFSHYTGSLTTPPCTEGVTWIVMNEPTIISKMQLDEFRKSVALFPDSKVDEEGNTNRPYQPLNGRDLFLV 875
IGGS AEIHWVH+KAGT D+LLV+GVLFD ++YG+NVEI+ LWDVLDIG +T F TR+YD++P N VFSHY GSLTTPPCTEGV WIVM++P + KMQLDEFR SVALF +SKVDE GNTNRP Q LN RD+F V
Sbjct: 2 IGGSEHEAEIHWVHVKAGTDDQLLVIGVLFDTTQYGSNVEIEHLWDVLDIGKPTTDEVFVTRVYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMGKMQLDEFRTSVALFDNSKVDEMGNTNRPRQSLNNRDIFFV 142
BLAST of mRNA_A-nodosum_M_contig8604.1.1 vs. uniprot
Match: D8LB10_ECTSI (Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB10_ECTSI) HSP 1 Score: 201 bits (512), Expect = 1.110e-55 Identity = 94/172 (54.65%), Postives = 118/172 (68.60%), Query Frame = 3
Query: 360 FRDCAQQASLSFNSETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHLKAGTADELLVVGVLFDVSEYGTNVEIQPLWDVLDIGAASTTASFETRIYDLIPPNKVFSHYTGSLTTPPCTEGVTWIVMNEPTIISKMQLDEFRKSVALFPDSKVDEEGNTNRPYQPLNGRDLFLV 875
F C L + ETYNL+Q HIHSPSEH +GG+ AAEIH VHLK T D LLVVG++F+VS+YG NVE++P+W+V+D+ F Y L+P F+ Y+GSLTTPPCTEGV WI+M+EP +S QLD +R++VAL SKV E G TNRP Q LNGRD+ V
Sbjct: 122 FSGCTDAPYLQYQGETYNLLQFHIHSPSEHVLGGAEHAAEIHLVHLKQNTTDGLLVVGIMFEVSDYGQNVELEPMWNVMDLNQDIAEEQFMAAAYSLLPATPSFTTYSGSLTTPPCTEGVRWILMSEPNYMSTWQLDNYRRAVALHEGSKVSEVGATNRPIQELNGRDVLYV 293
BLAST of mRNA_A-nodosum_M_contig8604.1.1 vs. uniprot
Match: A0A872YNN4_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A872YNN4_SACJA) HSP 1 Score: 183 bits (464), Expect = 7.430e-49 Identity = 91/175 (52.00%), Postives = 118/175 (67.43%), Query Frame = 3
Query: 360 FRDCAQQASLSFNSETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHLKA---GTADELLVVGVLFDVSEYGTNVEIQPLWDVLDIGAASTTASFETRIYDLIPPNKVFSHYTGSLTTPPCTEGVTWIVMNEPTIISKMQLDEFRKSVALFPDSKVDEEGNTNRPYQPLNGRDLFLV 875
F +C ++LSF+ Y+L+Q+HIHSPSEH + GSL AEIH VH + GT ELLV+GV D E+G NV ++PLWDVL GA Y+LIP + +SHY GSLTTPPC+E V W+VM+ PT+I +QLD FR SVA +S+VDE NTNRP Q +NGR +++V
Sbjct: 124 FSECTSTSNLSFDGGKYSLLQMHIHSPSEHMVAGSLHDAEIHLVHSRDDSDGTESELLVIGVFLDAKEHGWNVALEPLWDVLGSGAKPRGV---INPYELIPSDMAYSHYMGSLTTPPCSEIVRWVVMSTPTVIGDLQLDIFRDSVATATNSQVDERSNTNRPGQAINGRAVYIV 295
BLAST of mRNA_A-nodosum_M_contig8604.1.1 vs. uniprot
Match: A0A450XNX8_9GAMM (Carbonic anhydrase n=1 Tax=Candidatus Kentron sp. MB TaxID=2138164 RepID=A0A450XNX8_9GAMM) HSP 1 Score: 121 bits (303), Expect = 3.330e-27 Identity = 67/165 (40.61%), Postives = 94/165 (56.97%), Query Frame = 3
Query: 387 LSFNSETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHLKAGTADELLVVGVLFDVSEYGTNVEIQPLWDVLDIGAASTTASFET-RIYDLIPPNKVFSHYTGSLTTPPCTEGVTWIVMNEPTIISKMQLDEFRKSVALFPDSKVDEEGNTNRPYQPLNGRDLFLVK 878
L + + Y L+Q+H H+PSEH IGG L + E+H VH A EL V+G++ + E N I+ +W+ + A T S ET + L+P +K F +Y GSLTTPPC+EGV W VM P S+ Q+ +F + + G +NRP QPLNGR +F K
Sbjct: 102 LLVDGKPYKLLQLHFHTPSEHQIGGKLASMELHLVHQNADK--ELAVIGIM--IEEGKENKAIKGIWEKMPKKVAKETESHETFNVASLLPKDKTFFYYMGSLTTPPCSEGVRWFVMKTPIHFSEEQIRKFHRII-----------GVSNRPLQPLNGRTIFQGK 251
BLAST of mRNA_A-nodosum_M_contig8604.1.1 vs. uniprot
Match: A0A7X3PGE9_9BACT (Carbonic anhydrase n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A7X3PGE9_9BACT) HSP 1 Score: 117 bits (292), Expect = 1.880e-25 Identity = 66/169 (39.05%), Postives = 93/169 (55.03%), Query Frame = 3
Query: 366 DCAQQASLSFNSETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHLKAGTADELLVVGVLFDVSEYGTNVEIQPLWDVLDIGAASTTASFETRIYDLIPPNKVFSHYTGSLTTPPCTEGVTWIVMNEPTIISKMQLDEFRKSVALFPDSKVDEEGNTNRPYQPLNGRDLFL 872
D A+ + + ++L Q H H PSEH +GG+ A E H+VH+ A A +L V+G ++ G +V IQ +W+ + AS L+P +V++ YTGSLTTPPC+E V W+VM EPT S+ Q+D F K L P + RP QPLNGR + L
Sbjct: 114 DMAEGSFIVLEGREFSLTQFHFHLPSEHTVGGARYALEAHFVHVAA--AGDLAVIGTFIEIG--GEDVNIQRIWEAIPAYGASPVMLSGFDPATLLPGGRVYARYTGSLTTPPCSEAVHWVVMAEPTFASQAQVDLFSK---LHPPNA--------RPVQPLNGRTITL 267
BLAST of mRNA_A-nodosum_M_contig8604.1.1 vs. uniprot
Match: A0A836C9F5_9STRA (Alpha carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F5_9STRA) HSP 1 Score: 117 bits (294), Expect = 4.620e-25 Identity = 60/169 (35.50%), Postives = 95/169 (56.21%), Query Frame = 3
Query: 378 QASLSFNSETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHLKAGTADELLVVGVLFDVSEYGTNVEIQPLWDVLDIGAASTTASFETRI------YDLIPPNKVFSHYTGSLTTPPCTEGVTWIVMNEPTIISKMQLDEFRKSVALFPDSKVDEEGNTNRPYQPLNGRDL 866
Q S + +Y L Q+H+H+ SEH++ G AAE+H VH+ + ++LV+ VL DV+E E+ W +++ A+ + Y L+P +K + Y GSLT PPCTE VT++++ E T ++ QL FR+S + +D+ G+ RP QPLNGR +
Sbjct: 181 QYSGALGHSSYKLKQVHLHAGSEHSVDGQFGAAELHLVHINEADSTDILVLAVLLDVAETSEEPEVYKYWTLMNEAVANYQGESAIDMNAISDPYALLPESKQYYTYQGSLTIPPCTETVTFVILAERTQVADAQLQAFRQSQTIAFGPTLDQSGSNARPLQPLNGRSV 349
BLAST of mRNA_A-nodosum_M_contig8604.1.1 vs. uniprot
Match: H6WB77_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB77_VAULI) HSP 1 Score: 114 bits (286), Expect = 7.860e-25 Identity = 68/191 (35.60%), Postives = 94/191 (49.21%), Query Frame = 3
Query: 369 CAQQASLSFNSETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHLKAGTADELLVVGVLFD-VSEYGTNVEIQPLWD-----------------------VLDIGAASTTASFETRIYDLIPPNKVFSHYTGSLTTPPCTEGVTWIVMNEPTIISKMQLDEFRKSVALFPDSKVDEEGNTNRPYQPLNGRDLF 869
C +++ N +NL+Q H+HS SEH IGG AEIH+VH A L VVGV+ S+ N+E W+ V ++S +A + Y ++P + + +Y GSLTTPPC+E VTWIVM E +S QL+ FR + VD GN RP QP NGR ++
Sbjct: 66 CQTTPTITINGAVFNLLQFHLHSVSEHVIGGGYYDAEIHFVHYSALDPTSLAVVGVMISSTSDNVGNLEFAKYWEHMAYVSGKQQYASEIVEKSTATMVSATASSSMSAMEQVNPYSMLPADGTYYNYLGSLTTPPCSETVTWIVMKEGITVSPDQLEAFRAGLMDPEFPLVDNYGNNARPPQPTNGRMVY 256
BLAST of mRNA_A-nodosum_M_contig8604.1.1 vs. uniprot
Match: A0A2W7BC20_9CYAN (Carbonate dehydratase n=1 Tax=Pseudanabaena sp. TaxID=1153 RepID=A0A2W7BC20_9CYAN) HSP 1 Score: 114 bits (285), Expect = 9.970e-25 Identity = 64/168 (38.10%), Postives = 97/168 (57.74%), Query Frame = 3
Query: 372 AQQASLSFNSETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHLKAGTADELLVVGVLFDVSEYGTNVEIQPLW-DVLDIGAASTTASFETRIYDLIPPNKVFSHYTGSLTTPPCTEGVTWIVMNEPTIISKMQLDEFRKSVALFPDSKVDEEGNTNRPYQPLNGRDLFL 872
+Q ++++ N E Y+L+Q H H+PSEH I A E+H VH A +L V+GV+ ++E N I +W + DIG +T + + +L+P NK + Y+GSLTTPPC+EGV+W + EP +SK Q++ F + +VD RP QP+NGR + L
Sbjct: 104 SQGSTITINDEKYSLLQFHFHTPSEHNINSKASAMELHLVH--RNEAGQLAVIGVM--LNEGNLNPLIADIWKQIPDIGQTNTVSDRLINVTNLLPKNKAYFSYSGSLTTPPCSEGVSWNIFVEPITVSKEQIEAFSRIY------QVDA-----RPLQPINGRTVQL 256
BLAST of mRNA_A-nodosum_M_contig8604.1.1 vs. uniprot
Match: A0A2R3P8T9_9BACT (Carbonic anhydrase n=2 Tax=Bacteria TaxID=2 RepID=A0A2R3P8T9_9BACT) HSP 1 Score: 112 bits (280), Expect = 3.330e-24 Identity = 63/154 (40.91%), Postives = 85/154 (55.19%), Query Frame = 3
Query: 408 YNLVQIHIHSPSEHAIGGSLRAAEIHWVHLKAGTADELLVVGVLFDVSEYGTNVEIQPLWDVLDIGAASTTASFETRIYDLIPPNKVFSHYTGSLTTPPCTEGVTWIVMNEPTIISKMQLDEFRKSVALFPDSKVDEEGNTNRPYQPLNGRDLF 869
+ L Q H H+PSEH I G E H+VH A L V+GV+F E N I+ +W+ L + + + YDL+P K + Y+GSLTTPPC+EGV WIVM E +SK Q+++FRK + G+TNRP QPLN R +
Sbjct: 102 FELKQFHFHAPSEHTIKGKSYPFEAHFVH--ADKDGNLAVIGVIF--KEGKKNPIIEKIWENLPEAGKTIKLAHKINAYDLLPKKKKYYRYSGSLTTPPCSEGVRWIVMEEEMELSKEQIEKFRKLMG----------GDTNRPVQPLNARMIM 241 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8604.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig8604.1.1 >prot_A-nodosum_M_contig8604.1.1 ID=prot_A-nodosum_M_contig8604.1.1|Name=mRNA_A-nodosum_M_contig8604.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=111bp MSRFVLLAVSLLAYDAVVHVSAQPAEWTYRRTATGGGEPFGPSNWFQGFPback to top mRNA from alignment at A-nodosum_M_contig8604:17850..23543- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig8604.1.1 ID=mRNA_A-nodosum_M_contig8604.1.1|Name=mRNA_A-nodosum_M_contig8604.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5694bp|location=Sequence derived from alignment at A-nodosum_M_contig8604:17850..23543- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig8604:17850..23543- >mRNA_A-nodosum_M_contig8604.1.1 ID=mRNA_A-nodosum_M_contig8604.1.1|Name=mRNA_A-nodosum_M_contig8604.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=333bp|location=Sequence derived from alignment at A-nodosum_M_contig8604:17850..23543- (Ascophyllum nodosum dioecious)back to top |