prot_A-nodosum_M_contig8550.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8550.1.1
Unique Nameprot_A-nodosum_M_contig8550.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length202
Homology
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BLAST of mRNA_A-nodosum_M_contig8550.1.1 vs. uniprot
Match: A0A6H5K0Y0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Y0_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 4.100e-49
Identity = 91/140 (65.00%), Postives = 105/140 (75.00%), Query Frame = 0 
Query:   55 DDGITSAHGSSVSAQFTTRASSSLQRQYFGPGPKVFPDTVFLFLVLSQWFLAAWSVVGAVLYFRLFGQGRTCSTLLRHWTLLVVIIGFLSCLLAVCYSGIMCCMLGSPFKIGRNK-GSRRREGGGFHGDLSADSNSSDVG 193
            D+ I S   S++S +   + SSSLQ +YFGPGPKVFPDT+F  LV+SQWFLA WSVVGA LYFRLF   R CS LLRHWTLLVVIIGFLSCLLAVCYSGIMCCMLG+PF   R + GS  R+   FH DL + S+S+  G
Sbjct:   99 DESIVSGVPSTISHRLAAQ-SSSLQHRYFGPGPKVFPDTIFFILVVSQWFLAGWSVVGAALYFRLFTGNRMCSPLLRHWTLLVVIIGFLSCLLAVCYSGIMCCMLGAPFSRSRGRNGSGERDQ--FHADLPSSSDSTSTG 235
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BLAST of mRNA_A-nodosum_M_contig8550.1.1 vs. uniprot
Match: D7FV38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV38_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 6.480e-36
Identity = 78/128 (60.94%), Postives = 88/128 (68.75%), Query Frame = 0 
Query:   26 EFSANSDGDGVSGPAAGTGQEEGAEHHAIDDGITSAHGSSVSAQFTTRASSSLQRQYFGPGPKVFPDTVFLFLVLSQWFLAAWSVVGAVLYFRLFGQGRTCSTLLRHWTLLVVIIGFLSCLLAVCYSG 153
            E    S G GV+G     G+E        D+ I S   S++S +   + SSSLQ +YFGPGPKVFPDT+F  LV+SQWFLA WSVVGA LYFRLF   RTCS LLRHWTLLVVIIGFLSCLLAVC  G
Sbjct:  129 EEGGGSGGKGVNGGGMAGGEER--RDSMGDESIVSGVPSTISHRLAAQ-SSSLQHRYFGPGPKVFPDTIFFILVVSQWFLAGWSVVGAALYFRLFTGNRTCSPLLRHWTLLVVIIGFLSCLLAVCSWG 253
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8550.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0Y0_9PHAE4.100e-4965.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV38_ECTSI6.480e-3660.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8550contigA-nodosum_M_contig8550:15826..17796 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8550.1.1mRNA_A-nodosum_M_contig8550.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8550 13599..18353 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8550.1.1 ID=prot_A-nodosum_M_contig8550.1.1|Name=mRNA_A-nodosum_M_contig8550.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=202bp
MDLGPSGTPVGTMAQSGLPVLKEGEEFSANSDGDGVSGPAAGTGQEEGAE
HHAIDDGITSAHGSSVSAQFTTRASSSLQRQYFGPGPKVFPDTVFLFLVL
SQWFLAAWSVVGAVLYFRLFGQGRTCSTLLRHWTLLVVIIGFLSCLLAVC
YSGIMCCMLGSPFKIGRNKGSRRREGGGFHGDLSADSNSSDVGVVDPAGM
I*
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