prot_A-nodosum_M_contig854.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig854.5.1
Unique Nameprot_A-nodosum_M_contig854.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length86
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig854.5.1 vs. uniprot
Match: A0A6H5JC05_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC05_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 3.910e-20
Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 0 
Query:    1 AFLKADIDEEIYIEIPEEFQKFPGAVGRVNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKVDPCVFRKVVDGEAEMVVVVHVDDIL 86
            A++ A + EEIY+  PE      G V +V +A+YGL Q+GR W  +  D +   G+EQ +VDPCVFRKVVDGE   ++V++VDDIL
Sbjct:   49 AYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDIL 134
[Close]
BLAST of mRNA_A-nodosum_M_contig854.5.1 vs. uniprot
Match: A0A6H5KY81_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY81_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 9.590e-19
Identity = 42/86 (48.84%), Postives = 59/86 (68.60%), Query Frame = 0 
Query:    1 AFLKADIDEEIYIEIPEEFQKFPGAVGRVNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKVDPCVFRKVVDGEAEMVVVVHVDDIL 86
            A++ A ++EEIY+  PE      G V +V +A+YGL Q+GR W  +  D +   G+EQ +VDPCVFRKVVDGE   ++V++VDDIL
Sbjct:  218 AYIHATLNEEIYLRFPEGHGSMSGKVVKVERALYGLKQSGREWGVEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDIL 303
[Close]
BLAST of mRNA_A-nodosum_M_contig854.5.1 vs. uniprot
Match: A0A6H5JXU1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU1_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 2.210e-18
Identity = 41/86 (47.67%), Postives = 58/86 (67.44%), Query Frame = 0 
Query:    1 AFLKADIDEEIYIEIPEEFQKFPGAVGRVNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKVDPCVFRKVVDGEAEMVVVVHVDDIL 86
            A++ A + EEIY+  PE      G V ++ +A+YGL Q+GR W  +  D +   G+EQ +VDPCVFRKVVDGE   ++V++VDDIL
Sbjct:   49 AYIHAKLREEIYLSFPEGCSSMSGKVVKIERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDIL 134
[Close]
BLAST of mRNA_A-nodosum_M_contig854.5.1 vs. uniprot
Match: A0A6H5JUN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN0_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 2.390e-18
Identity = 41/86 (47.67%), Postives = 58/86 (67.44%), Query Frame = 0 
Query:    1 AFLKADIDEEIYIEIPEEFQKFPGAVGRVNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKVDPCVFRKVVDGEAEMVVVVHVDDIL 86
            A++ A + EEIY+  PE      G V +V +A+YGL Q+GR W  +  D +   G+EQ +VDPC+FRKVVDGE   ++V++VDDIL
Sbjct:  132 AYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIEYGYEQCRVDPCIFRKVVDGEVVGLIVINVDDIL 217
[Close]
BLAST of mRNA_A-nodosum_M_contig854.5.1 vs. uniprot
Match: A0A6H5JEM4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM4_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 3.190e-18
Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 0 
Query:    1 AFLKADIDEEIYIEIPEEFQKFPGAVGRVNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKVDPCVFRKVVDGEAEMVVVVHVDDIL 86
            A++ A + EEIY+  PE      G V +V +A+YGL Q+GR W  +  D +   G+EQ +VDPCVFRKVVDGE   ++V++VDDIL
Sbjct:  400 AYIHAKLKEEIYLRFPEGCGSISGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDIL 485
[Close]
BLAST of mRNA_A-nodosum_M_contig854.5.1 vs. uniprot
Match: A0A6H5K3C5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3C5_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 3.210e-18
Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 0 
Query:    1 AFLKADIDEEIYIEIPEEFQKFPGAVGRVNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKVDPCVFRKVVDGEAEMVVVVHVDDIL 86
            A++ A + EEIY+  PE      G V +V +A+YGL Q+GR W  +  D +   G+EQ +VDPCVFRKVVDGE   ++V++VDDIL
Sbjct:  574 AYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDIL 659
[Close]
BLAST of mRNA_A-nodosum_M_contig854.5.1 vs. uniprot
Match: A0A6H5JI74_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI74_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 4.440e-18
Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 0 
Query:    1 AFLKADIDEEIYIEIPEEFQKFPGAVGRVNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKVDPCVFRKVVDGEAEMVVVVHVDDIL 86
            A++ A + EEIY+  PE      G V +V +A+YGL Q GR W  +  D +   G+EQ +VDPCVFRKVVDGE   ++V++VDDIL
Sbjct:  616 AYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQGGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDIL 701
[Close]
BLAST of mRNA_A-nodosum_M_contig854.5.1 vs. uniprot
Match: A0A6H5KKQ0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ0_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 5.050e-18
Identity = 37/86 (43.02%), Postives = 59/86 (68.60%), Query Frame = 0 
Query:    1 AFLKADIDEEIYIEIPEEFQKFPGAVGRVNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKVDPCVFRKVVDGEAEMVVVVHVDDIL 86
            A+  A + E+IY+ +P+    + G   +V +A+YGL Q+GR W  +  D + + G+EQ +VDPC+FRKVVDGE   ++V++VDDI+
Sbjct:   20 AYTHAKLKEDIYLRLPDGCGVWTGKAVKVERALYGLKQSGREWGFEAADALISNGYEQCRVDPCIFRKVVDGELVGLIVINVDDIM 105
[Close]
BLAST of mRNA_A-nodosum_M_contig854.5.1 vs. uniprot
Match: A0A6H5KF18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF18_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 5.980e-18
Identity = 41/86 (47.67%), Postives = 58/86 (67.44%), Query Frame = 0 
Query:    1 AFLKADIDEEIYIEIPEEFQKFPGAVGRVNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKVDPCVFRKVVDGEAEMVVVVHVDDIL 86
            A++ A + EEIY+  PE      G V +V +A+YGL Q+GR W  +  D +   G+EQ +VDPCVFRKVVDGE   ++V++VDDI+
Sbjct:  329 AYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDII 414
[Close]
BLAST of mRNA_A-nodosum_M_contig854.5.1 vs. uniprot
Match: A0A6H5K1I0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1I0_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 6.060e-18
Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 0 
Query:    1 AFLKADIDEEIYIEIPEEFQKFPGAVGRVNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKVDPCVFRKVVDGEAEMVVVVHVDDIL 86
            A++ A + EEIY+  PE      G V +V +A+YGL Q+GR W  +  D +   G+EQ +VDPCVFRKVVDGE   ++V++VDDIL
Sbjct:  475 AYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVMYVDDIL 560
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig854.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JC05_9PHAE3.910e-2048.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KY81_9PHAE9.590e-1948.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JXU1_9PHAE2.210e-1847.67Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JUN0_9PHAE2.390e-1847.67Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JEM4_9PHAE3.190e-1848.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K3C5_9PHAE3.210e-1848.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JI74_9PHAE4.440e-1848.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KKQ0_9PHAE5.050e-1843.02Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KF18_9PHAE5.980e-1847.67Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1I0_9PHAE6.060e-1848.84Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..86
e-value: 3.6E-17
score: 62.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig854contigA-nodosum_M_contig854:80040..80297 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig854.5.1mRNA_A-nodosum_M_contig854.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig854 80040..80297 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig854.5.1 ID=prot_A-nodosum_M_contig854.5.1|Name=mRNA_A-nodosum_M_contig854.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=86bp
AFLKADIDEEIYIEIPEEFQKFPGAVGRVNKAIYGLVQAGRCWNNKFCDD
MTAIGFEQAKVDPCVFRKVVDGEAEMVVVVHVDDIL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2