prot_A-nodosum_M_contig8518.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8518.1.1
Unique Nameprot_A-nodosum_M_contig8518.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length35
Homology
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BLAST of mRNA_A-nodosum_M_contig8518.1.1 vs. uniprot
Match: D7FP86_ECTSI (Cnd1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP86_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 8.960e-11
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 0 
Query:    1 METVVPILTALKHVLERAHSPILRELMSYFGEILR 35
            ME VVPILTALKHVLERAHSP+LRE+MSYFGE+ R
Sbjct: 1375 MEKVVPILTALKHVLERAHSPLLREIMSYFGELFR 1409
[Close]
BLAST of mRNA_A-nodosum_M_contig8518.1.1 vs. uniprot
Match: A0A6H5JKF8_9PHAE (Cnd1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF8_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 1.500e-9
Identity = 28/35 (80.00%), Postives = 32/35 (91.43%), Query Frame = 0 
Query:    1 METVVPILTALKHVLERAHSPILRELMSYFGEILR 35
            ME VVPILTALKHVLER+HSP+LRE+M YFGE+ R
Sbjct:  521 MEKVVPILTALKHVLERSHSPLLREIMFYFGELFR 555
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8518.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FP86_ECTSI8.960e-1185.71Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JKF8_9PHAE1.500e-980.00Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8518contigA-nodosum_M_contig8518:608..712 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8518.1.1mRNA_A-nodosum_M_contig8518.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8518 608..736 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8518.1.1 ID=prot_A-nodosum_M_contig8518.1.1|Name=mRNA_A-nodosum_M_contig8518.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=35bp
METVVPILTALKHVLERAHSPILRELMSYFGEILR
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