prot_A-nodosum_M_contig850.8.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig850.8.1
Unique Nameprot_A-nodosum_M_contig850.8.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length156
Homology
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BLAST of mRNA_A-nodosum_M_contig850.8.1 vs. uniprot
Match: D7G1W8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1W8_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 6.870e-29
Identity = 74/143 (51.75%), Postives = 91/143 (63.64%), Query Frame = 0 
Query:   19 LGDETGGPGSNSPGRKTMVSAALSTVGANDEALLSTFAEVMSEGLPVKILKPSGRAKKVMLRLKDRGTLLWSSRRALGAKKWRKISLREVTGIQAGRGSEPF------ENADDALCLLLVLSSAGCLGVEASSELERDALVQG 155
            LGD   G       RKT VSAA +T+ A DEALL TF EV+SEGLP+KI + S RA+K  L LK   TL+WSS+RA+G+K+W K SL  VT +QAG+G          E+A +  C  L   S   +G EA+SELERDALVQG
Sbjct:  180 LGDSDAGS------RKTTVSAAPTTLSAADEALLGTFMEVLSEGLPIKIHRTSKRARKTTLWLKGADTLVWSSKRAIGSKQWHKQSLGGVTSVQAGKGGSDSLIIGSGESAPEDSCFSLCFPSVS-MGFEAASELERDALVQG 315
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig850.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1W8_ECTSI6.870e-2951.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 54..156
e-value: 2.7E-8
score: 35.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..35
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 54..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig850contigA-nodosum_M_contig850:65854..71571 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig850.8.1mRNA_A-nodosum_M_contig850.8.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig850 65854..78942 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig850.8.1 ID=prot_A-nodosum_M_contig850.8.1|Name=mRNA_A-nodosum_M_contig850.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=156bp
MGSWNLSFMGGDEETSRALGDETGGPGSNSPGRKTMVSAALSTVGANDEA
LLSTFAEVMSEGLPVKILKPSGRAKKVMLRLKDRGTLLWSSRRALGAKKW
RKISLREVTGIQAGRGSEPFENADDALCLLLVLSSAGCLGVEASSELERD
ALVQGL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom_sf