prot_A-nodosum_M_contig849.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig849.2.1
Unique Nameprot_A-nodosum_M_contig849.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length229
Homology
BLAST of mRNA_A-nodosum_M_contig849.2.1 vs. uniprot
Match: UPI001C9BC1AB (secreted RxLR effector protein 161-like n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9BC1AB)

HSP 1 Score: 153 bits (386), Expect = 2.160e-42
Identity = 85/240 (35.42%), Postives = 134/240 (55.83%), Query Frame = 0
Query:   10 PLSKEGGPTNPKEREEMRRIPYREEVGALIWAATMTRPNLLFAAHTLAKFCDNPGPVHWKAATIALRYFWLTKDLGITYDGGVTSRGLTTSAYVDSDHATCPDSRRSVSDGADMVGGGPISWLSRAQRVTASASYGLEYVALAEIVN------------------------DNQGEIKVANNKHSSRRTRHIDVKHNIVRDAVEEGLVRIVYVRSEEQHTDILTKALDMRTFELHAKALT 225
            PLS E  P N +E+  M+ +PYRE VG L++AA +TRP++++A   +++F +NPG  HWKA    LRY   TK +GI Y G      +  +AY D+D A   D+RRS +    ++ GGP+ W S  Q+  + ++   EYVA ++                           DNQ  I++  N    ++T+HID+K++ +R+ VE G ++I+YV +EEQ  DILTKA+    F ++  +L+
Sbjct:   16 PLSNEQSPVNDEEKVSMQEMPYREAVGCLMFAAILTRPDIMYAVSQVSRFLNNPGKEHWKAVKRILRYIQGTKYMGIKYSGS----HIDFTAYSDADFAGDVDTRRSTTGYITLMAGGPVIWSSHRQKCISRSTTEAEYVAASDASQEVTWLRILLQELCVDLKNPTPLHMDNQSAIRLTKNTEHHKKTKHIDIKYHYIRECVEHGAIKIIYVCTEEQLADILTKAVPRDKFLINRTSLS 251          
BLAST of mRNA_A-nodosum_M_contig849.2.1 vs. uniprot
Match: A0A0J7KA47_LASNI (Retroelement pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KA47_LASNI)

HSP 1 Score: 155 bits (392), Expect = 9.250e-40
Identity = 90/238 (37.82%), Postives = 133/238 (55.88%), Query Frame = 0
Query:   11 LSKEGGPTNPKEREEMRRIPYREEVGALIWAATMTRPNLLFAAHTLAKFCDNPGPVHWKAATIALRYFWLTKDLGITYDGGVTSRGLTTSAYVDSDHATCPDSRRSVSDGADMVGGGPISWLSRAQRVTASASYGLEYVALAEIVN------------------------DNQGEIKVANNKHSSRRTRHIDVKHNIVRDAVEEGLVRIVYVRSEEQHTDILTKALDMRTFELHAKAL 224
            LSK   P +   ++ M +IP+RE VG+L++AA ++RP+++FA   ++++ +NPGP HW+A    +RY   T   GI YDG  T+ GL    Y DSD+A+ PD+RRS S    ++ GG +SW+S+ QR+   ++   EYVA  +                           DNQG IK+  N    +RT+HIDV+ + +R+  E G V I YV S +Q  DILTKAL   +FE +   L
Sbjct:  990 LSKSMAPEDDDGKQAMAKIPFREAVGSLMFAACVSRPDIMFAVSVVSRYLENPGPEHWQAVKRIIRYAKETATYGIVYDGQNTN-GLI--VYSDSDYASDPDTRRSTSGYITVLAGGAVSWMSQRQRIVTLSTTEAEYVAACDATKEAIWIQRFLKSVGVNEKGPTEMRLDNQGSIKLVKNLEFHKRTKHIDVRFHFIREVYENGQVDIKYVPSSKQLADILTKALPKNSFEANRAGL 1224          
BLAST of mRNA_A-nodosum_M_contig849.2.1 vs. uniprot
Match: A0A6H5JGZ8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGZ8_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 1.530e-38
Identity = 78/230 (33.91%), Postives = 127/230 (55.22%), Query Frame = 0
Query:   22 EREEMRRIPYREEVGALIWAATMTRPNLLFAAHTLAKFCDNPGPVHWKAATIALRYFWLTKDLGITYDGGVTSRGLTTSAYVDSDHATCPDSRRSVSDGADMVGGGPISWLSRAQRVTASASYGLEYVALAEIVN-------------------------DNQGEIKVANNKHSSRRTRHIDVKHNIVRDAVEEGLVRIVYVRSEEQHTDILTKALDMRTFELHAKALTN 226
            E E    +P+RE VG+L+W AT TRP++  A   +A++C +P  VHWKA    L Y W T  +GIT++ GV +R +    +V++D+A+    RRSVS G  M GGG ++W SR Q+    ++   EY+A+A+++                          D  G I++A+N  ++  ++HIDV+H+++R+ VE   +   +V ++ QH D L KA+   +F LH   + N
Sbjct:  188 ENEACADVPFRELVGSLMWMATQTRPDIANAVRAVARYCASPKMVHWKATLGVLGYVWTTSWMGITFERGVVTR-MRMQVFVNADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYMAIADVLKEVLFLRQVWRCTLPDAGMPCIPVFEDTHGAIQIAHNPITNSNSKHIDVRHHLIRELVERKEISFTHVPTQFQHADFLAKAISKDSFALHRDFVMN 416          
BLAST of mRNA_A-nodosum_M_contig849.2.1 vs. uniprot
Match: A0A0J7KHD5_LASNI (Retrotransposon ty1-copia subclass n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KHD5_LASNI)

HSP 1 Score: 149 bits (376), Expect = 1.230e-37
Identity = 84/221 (38.01%), Postives = 127/221 (57.47%), Query Frame = 0
Query:   22 EREEMRRIPYREEVGALIWAATMTRPNLLFAAHTLAKFCDNPGPVHWKAATIALRYFWLTKDLGITYDGGVTSRGLTTSAYVDSDHATCPDSRRSVSDGADMVGGGPISWLSRAQRVTASASYGLEYVALAEIVN------------------------DNQGEIKVANNKHSSRRTRHIDVKHNIVRDAVEEGLVRIVYVRSEEQHTDILTKALDMRTFE 218
            ++ +M ++P+RE VG+L++AA ++RP+++FA   ++++ +NPG  HW+A    +RY   T   GI YDG  T  GL    Y DSD+AT PD+RRS S    ++ GG +SW+S+ QR+ A ++   EYVA ++                           DNQG IK+  N    +RT+HIDV+ + +R+  + G + I YV S +Q  DILTKAL   TFE
Sbjct:  707 DKRDMEKVPFREAVGSLMFAACVSRPDIMFAVSVVSRYLENPGLEHWQAVKRIIRYAKETAAYGIVYDGHNTD-GLI--IYSDSDYATDPDTRRSTSGYVTVLAGGAVSWMSQRQRIVALSTTEAEYVAASDATKEAIWIRRLLESVGVNKKGPIEMRLDNQGSIKLIKNPEFHKRTKHIDVRFHYIREIYKNGQIDIKYVPSSKQLADILTKALPKSTFE 924          
BLAST of mRNA_A-nodosum_M_contig849.2.1 vs. uniprot
Match: A0A6H5L8D6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D6_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 2.830e-36
Identity = 87/250 (34.80%), Postives = 127/250 (50.80%), Query Frame = 0
Query:    2 IPMTTGVKPLSKEGGPTNPKEREEMRRIPYREEVGALIWAATMTRPNLLFAAHTLAKFCDNPGPVHWKAATIALRYFWLTKDLGITYDGGVTSRGLTTSAYVDSDHATCPDSRRSVSDGADMVGGGPISWLSRAQRVTASASYGLEYVALAEIVN-------------------------DNQGEIKVANNKHSSRRTRHIDVKHNIVRDAVEEGLVRIVYVRSEEQHTDILTKALDMRTFELHAKALTN 226
            +PM++GVK    +         E     P+ E VG+L+W AT TRP++  A  T+A++C +P  V W AA   L Y   T   GI++  G T  GL+   Y D+D AT    RRSVS G    GGG +SW SR Q+    ++   EYVAL ++V                          DNQG I++A N  S+  ++H+DV+H++VR+ VE   + +++V    Q  D LTK+L    FE H + + N
Sbjct:  186 VPMSSGVKLSDFDAD-------EVTTDFPFHELVGSLMWLATQTRPDIANAVRTVARYCASPKLVPWNAAMDILGYARRTSQFGISFQRG-TVEGLSLQGYADADFATKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQFWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHVDVRHHLVRELVERKEISVIHVPRRYQRADFLTKSLPKDAFESHREFVMN 427          
BLAST of mRNA_A-nodosum_M_contig849.2.1 vs. uniprot
Match: A0A6H5L5Q2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Q2_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 6.590e-35
Identity = 80/222 (36.04%), Postives = 115/222 (51.80%), Query Frame = 0
Query:   30 PYREEVGALIWAATMTRPNLLFAAHTLAKFCDNPGPVHWKAATIALRYFWLTKDLGITYDGGVTSRGLTTSAYVDSDHATCPDSRRSVSDGADMVGGGPISWLSRAQRVTASASYGLEYVALAE-------------------------IVNDNQGEIKVANNKHSSRRTRHIDVKHNIVRDAVEEGLVRIVYVRSEEQHTDILTKALDMRTFELHAKALTN 226
            P+R  VG L+W A  TRP++L A   +A++   P  VHWKAA   + Y   T   GIT+  G T+ G++   YVDSD+A+    RRSVS G  M  G  +S+ SR Q+    +S   EY A+A+                         I  DN G + +ANN  ++  ++HIDV+H+ +R+ V+ G  ++VYV S  QH D LTK L    F +H   + N
Sbjct:  124 PFRSLVGHLMWLANQTRPDILNAVRAVARYSYAPKSVHWKAALHIVMYIRCTSAYGITFQRG-TAGGVSLEVYVDSDYASKATDRRSVSGGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEAIFLRYLWSFIFPDGDVGCTVIKEDNVGALHLANNPATTPNSKHIDVRHHFIRERVDRGEFKVVYVPSHLQHADFLTKPLPKEAFSVHRNFVMN 344          
BLAST of mRNA_A-nodosum_M_contig849.2.1 vs. uniprot
Match: Q572I3_PHYIN (Putative polyprotein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=Q572I3_PHYIN)

HSP 1 Score: 140 bits (353), Expect = 1.560e-34
Identity = 81/233 (34.76%), Postives = 125/233 (53.65%), Query Frame = 0
Query:   11 LSKEGGPTNPKEREEMRRIPYREEVGALIWAATMTRPNLLFAAHTLAKFCDNPGPVHWKAATIALRYFWLTKDLGITYDGGVTSRG---LTTSAYVDSDHATCPDSRRSVSDGADMVGGGPISWLSRAQRVTASASYGLEYVALA------------------------EIVNDNQGEIKVANNKHSSRRTRHIDVKHNIVRDAVEEGLVRIVYVRSEEQHTDILTKALDMRT 216
            LSK   PT  KER EM   PYR  +G L++  T TRP++ +    LA+F ++PG  HWKAA   L+Y   T+  GI Y  G +  G   +   A+ D+D  +  D RRSVS    M+G  P+ + S+ QR  A +S   EY+AL+                        ++  DNQG I +A+N     RT+H+D++H+ +R+ VE   +++ Y+ +++Q  D+LTKAL  ++
Sbjct: 1104 LSKMMSPTTEKERAEMWSRPYRSLIGCLMYITTCTRPDIAYVVTQLARFLEDPGTQHWKAAIRVLQYLKSTRHHGIVYKSGTSGFGTQAVKAEAFTDADWGSNIDDRRSVSGVMVMIGNAPVVFKSKYQRTVALSSAEAEYMALSLCTQEVLWTRAMLKDMGHEQVGATQVWEDNQGAIALASNAGYHARTKHVDIRHHFIRENVERSTIKVAYIDTKQQLADMLTKALGTKS 1336          
BLAST of mRNA_A-nodosum_M_contig849.2.1 vs. uniprot
Match: UPI001AADD243 (secreted RxLR effector protein 161-like n=2 Tax=gambiae species complex TaxID=44542 RepID=UPI001AADD243)

HSP 1 Score: 132 bits (333), Expect = 1.810e-34
Identity = 79/241 (32.78%), Postives = 123/241 (51.04%), Query Frame = 0
Query:    2 IPMTTGVKPLSKEGGPTNPKEREEMRRIPYREEVGALIWAATMTRPNLLFAAHTLAKFCDNPGPVHWKAATIALRYFWLTKDLGITYDGGVTSRGLTTSAYVDSDHATCPDSRRSVSDGADMVGGGPISWLSRAQRVTASASYGLEYVALA-----------------------EIVNDNQGEIKVANNKHSSRRTRHIDVKHNIVRDAVEEGLVRIVYVRSEEQHTDILTKALDMRTFEL 219
            +PM    K L+KE  P +  E   M+ +PY+E VG L++ A  TRP++L+A + L++F  NPG  HW      +RY   T +  + Y   V S+ +    Y D+D  + PD R+S +    M  GG ISW+ + Q   A ++   EY++++                       EI  DNQ  I +  N     RT+HID++H+ ++DA+  G+V + YV +E+Q  D LTK L    FE+
Sbjct:    9 VPMNNSEK-LTKEESPKSNNETAAMKDVPYQEAVGCLMYLAQSTRPDILYAVNMLSRFNKNPGQKHWNGVKHVMRYLRGTSNFKLVYKKNVDSKII---GYCDADWGSDPDERKSTTGNIFMAQGGAISWMCKKQPTVALSTCEAEYMSVSAAVQEASWWRGLSAKLANADEVIEIRCDNQSCIAITKNGGYHPRTKHIDIRHHFIKDALSRGIVTLEYVSTEDQIADGLTKPLQRTKFEI 245          
BLAST of mRNA_A-nodosum_M_contig849.2.1 vs. uniprot
Match: UPI001E1BDE4E (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BDE4E)

HSP 1 Score: 132 bits (333), Expect = 2.270e-34
Identity = 83/240 (34.58%), Postives = 121/240 (50.42%), Query Frame = 0
Query:    3 PMTTGVKPLSKEGGPTNPKEREEMRRIPYREEVGALIWAATMTRPNLLFAAHTLAKFCDNPGPVHWKAATIALRYFWLTKDLGITYDGGVTSRGLTTSAYVDSDHATCPDSRRSVSDGADMVGGGPISWLSRAQRVTASASYGLEYVALAEIVN------------------------DNQGEIKVANNKHSSRRTRHIDVKHNIVRDAVEEGLVRIVYVRSEEQHTDILTKALDMRTFE 218
            P   G+K LS    P   KE EEM++IPY+E VGAL++ +T TRP++ +A   +AKF  NPG  HWKA     RY   T++ GI +    + +      + D+DHA  PD + S S    +  GG  SW SR Q  T+ ++   E+VA  E                           DNQG I+VANN    RR +H++++   V+ A + G++   +V S  Q  DI TKAL   +++
Sbjct:   10 PAEPGLK-LSLNMSPQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRIFRYLAGTREYGILFSPNPSGKEEEIVDFTDADHAGDPDDQTSTSGCVFICHGGSFSWFSRKQGCTSLSTTEAEFVAGGEAAKEATWIRAFLKEIGKRNLEAIPLFCDNQGAIRVANNPELHRRMKHVELRFRFVQQAQKTGVIDACFVDSRNQVVDIFTKALPTPSYQ 248          
BLAST of mRNA_A-nodosum_M_contig849.2.1 vs. uniprot
Match: A0A0J7K988_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K988_LASNI)

HSP 1 Score: 139 bits (351), Expect = 2.850e-34
Identity = 86/222 (38.74%), Postives = 124/222 (55.86%), Query Frame = 0
Query:   19 NPKEREEMRRIPYREEVGALIWAATMTRPNLLFAAHTLAKFCDNPGPVHWKAATIALRYFWLTKDLGITYDGGVTSRGLTTSAYVDSDHATCPDSRRSVSDGADMVGGGPISWLSRAQRVTASASYGLEYVALAE-----------------------IVN-DNQGEIKVANNKHSSRRTRHIDVKHNIVRDAVEEGLVRIVYVRSEEQHTDILTKALDMRT 216
            N ++ E M  IPYRE VG+L++AA ++RP+++FA   ++KF  NP   HW+A    LRY   T D+GI Y     ++ +    Y DSD+A   D+R+S S     + GG ISW SR Q V A ++   EY+A ++                       I+N DNQG IK+  N    +RT+HIDV+++ +R+ V  G + I YV+SEEQ  DI TKAL  +T
Sbjct: 1007 NDEKDELMTNIPYREAVGSLMFAAVVSRPDIMFAVANVSKFLSNPSREHWQAVKTILRYVKNTLDVGIEYRKTGETKLI---GYSDSDYAGDIDTRKSTSGIVFTLAGGAISWASRRQSVVAMSTTEAEYIAASDATKEAIWLRRLLKDVGLRQERPTILNVDNQGAIKLIRNPELHKRTKHIDVRYHFIREKVNGGEIEIDYVKSEEQLADIFTKALPKQT 1225          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig849.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C9BC1AB2.160e-4235.42secreted RxLR effector protein 161-like n=1 Tax=Ve... [more]
A0A0J7KA47_LASNI9.250e-4037.82Retroelement pol polyprotein n=1 Tax=Lasius niger ... [more]
A0A6H5JGZ8_9PHAE1.530e-3833.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0J7KHD5_LASNI1.230e-3738.01Retrotransposon ty1-copia subclass n=1 Tax=Lasius ... [more]
A0A6H5L8D6_9PHAE2.830e-3634.80Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5Q2_9PHAE6.590e-3536.04Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q572I3_PHYIN1.560e-3434.76Putative polyprotein n=1 Tax=Phytophthora infestan... [more]
UPI001AADD2431.810e-3432.78secreted RxLR effector protein 161-like n=2 Tax=ga... [more]
UPI001E1BDE4E2.270e-3434.58secreted RxLR effector protein 161-like n=1 Tax=Da... [more]
A0A0J7K988_LASNI2.850e-3438.74Integrase core domain protein n=1 Tax=Lasius niger... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 6..25
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 101..212
e-value: 4.50167E-43
score: 140.296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig849contigA-nodosum_M_contig849:73845..74606 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig849.2.1mRNA_A-nodosum_M_contig849.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig849 73845..75131 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig849.2.1 ID=prot_A-nodosum_M_contig849.2.1|Name=mRNA_A-nodosum_M_contig849.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=229bp
MIPMTTGVKPLSKEGGPTNPKEREEMRRIPYREEVGALIWAATMTRPNLL
FAAHTLAKFCDNPGPVHWKAATIALRYFWLTKDLGITYDGGVTSRGLTTS
AYVDSDHATCPDSRRSVSDGADMVGGGPISWLSRAQRVTASASYGLEYVA
LAEIVNDNQGEIKVANNKHSSRRTRHIDVKHNIVRDAVEEGLVRIVYVRS
EEQHTDILTKALDMRTFELHAKALTNSR*
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