prot_A-nodosum_M_contig8422.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8422.5.1
Unique Nameprot_A-nodosum_M_contig8422.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length480
Homology
BLAST of mRNA_A-nodosum_M_contig8422.5.1 vs. uniprot
Match: D7FK98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK98_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 2.600e-61
Identity = 183/507 (36.09%), Postives = 226/507 (44.58%), Query Frame = 0
Query:    1 MVGRALNSQVFTLALDTLQWSTLAPHPLGLNVPSIHGHTAVEDPMHAGRIIVFGGRGGTHWNTEVLIFNSKQRLWSMAVCEMAPRPPSSIEGRNPSNANIAGPAIENRGKDASPLRVTFVEPAESAGGTSAAAGRRKEYR-------------QMPHH-----------RSGHTCFAWDARTSVAMSRGGTAAGVCTDSGS-----------TSNKESGASVSEEAKRSRRGQTNERGIKPLF-----------------------------------------------SKSSRSKGGGGKDTTESENGGGVPGERADHAECHVPHPCIIAFGGSALRPGGGYSEAKLHVLEDPPPESNAKVFEDSELDEEAMTERRKSSLAEEI--SGDPGATTRRQSISKFQTCADSVLLKLHSLRQVGNWQPTFESKL---DVSYIGSSARYAILG------ESEGDVSDKTPWHSPISFGEEDGAV---------NPKENRLGVFPTHYEQA 405
            MVGRALNSQV+ LALDTLQWSTL PHPLG + P+IHGHTAVEDP HAGR+I+FGGRGG  WNT+VL F  ++ LWSMAVC+MA  PP  +      NAN    A   R   ASPLRVT ++     G T  + G   E +             + P H           R GHTCF WD R          AA  C D G              +   G  VS +     RG     G                                                    S++ R+                 P    D +   +PHPCI+ FGGSALR GGGY+ A LHVLE P PE N     DS+ D      R+ SS +  I  S +  A   +Q+ +KFQ+  +SVLLK+HSLRQ+GN Q TF       D+SYI    +  +LG      E++G   D+    SP +                 +P   RLG FPT YEQA
Sbjct:  245 MVGRALNSQVYMLALDTLQWSTLEPHPLGFSAPAIHGHTAVEDPAHAGRLIIFGGRGGKSWNTQVLTFQFRKNLWSMAVCDMAEPPPDEL------NANQTSAARGKR-SSASPLRVTILDN-PVIGRTEPSRGGSDEPKAAPAPPSPNNTDDERPQHEPLGEPGQQAKRHGHTCFVWDPRQ---------AALACNDGGGGXXXXXXXXXXXXDGARGLPVSPKRGSQNRGSGRSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSRNRRTP---------------TPSSPTDES---LPHPCIVTFGGSALRTGGGYARAALHVLETPAPEDN-----DSDNDGGG---RKASSPSTGILASLELAADAPKQTFNKFQSFTNSVLLKVHSLRQLGNEQLTFGDSYNPEDLSYIDLKVQSVVLGVGGRTLEADGSDEDRNSKTSPAATTAGGSKAKTRADVKPPHPGAGRLGSFPTGYEQA 708          
BLAST of mRNA_A-nodosum_M_contig8422.5.1 vs. uniprot
Match: A0A6H5JRA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA7_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 2.210e-54
Identity = 176/529 (33.27%), Postives = 231/529 (43.67%), Query Frame = 0
Query:    1 MVGRALNSQVFTLALDTLQWSTLAPHPLGLNVPSIHGHTAVEDPMHAGRIIVFGGRGGTHWNTE-----VLIFNSKQRLWSMAVCEMAPRPPSSIEGRNPSNANIAGPAIENRGKDASPLRVTFVE----------------------------------------------------PAESAGGTSAAAGRRKEYR---------------------------QMPHHRSGHTCFAWDAR-TSVAMSRGGTAAG---------------------------VCTDSGSTSNKESGASVSEEAKRSRRGQTNERGIKPLFSKSSRSKGGGGKDTTESENGGG-VPGERADHAECHVPHPCIIAFGGSALRPGGGYSEAKLHVLEDPPPESNAKVFEDSELDEEAMTERRKSSLAEEI--SGDPGATTRRQSISKFQTCADSVLLKLHSLRQVGNWQPTFESKL---DVSYIGSSARYAILG------ESEGDVSDKTPWHSPISFGEEDGAVNPKE---NRLGVFPTHY 402
            MVGRALN QV+ LALDTLQWS L PHPLG + P+IHGHTAVEDP HAGR+I+FGGRGG +WNT+     VL    ++ LWSMAVC+M   PP  +      NAN +  +   R   ASPLRVT ++                                                    P+ S  G  A+ G +                                MPH R GHTCF WD R  ++A + GG  AG                                 S      GAS     KR R G+       P    SSR           S N    +P    D +   +PHPCI+ FGGSALR GGGY+ A LHVLE P PE   +  +D++ D++    R+ SS +  I  S +  A   +Q+ +KFQ+  +SVLLK+HSLRQ+GN Q +F       D+SYI    +  +LG      E++G   D+    +  S   +   V P      RLG + + +
Sbjct:  285 MVGRALNGQVYMLALDTLQWSILEPHPLGFSAPAIHGHTAVEDPAHAGRLIIFGGRGGKNWNTQGGNGKVLTCQFRKNLWSMAVCDMGEPPPDEL------NANQSSTSKGKR-SSASPLRVTILDNPVIGKTQPSRGGSDEPIAAPATPSPNNTDDERPQNEPRREPGQQPKVKNPPPSSSLAGILASGGLKXXXXXXXXXXXXXXXXXXKAATEHSAAAMVAMMPHQRHGHTCFVWDPRQAALACNGGGAEAGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSNCGAGGGASRKSSPKRPRGGENXXXXPLP----SSRKXXXXXXXXXRSRNRRTPMPSSPTDES---LPHPCIVTFGGSALRTGGGYARAALHVLETPAPEDGGRGNDDNDSDKDGGG-RKGSSPSTGILASLESAAGAPKQTFNKFQSFTNSVLLKVHSLRQLGNEQLSFGDSYNPDDLSYIDLKVQSVVLGVGGRTLEADGSDEDRNSTTAEGSRAIKRANVKPPHPCAGRLGSYQSIF 798          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8422.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FK98_ECTSI2.600e-6136.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRA7_9PHAE2.210e-5433.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 2..183
e-value: 6.9E-9
score: 37.0
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 9..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 408..440
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 418..440
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8422contigA-nodosum_M_contig8422:16343..20692 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8422.5.1mRNA_A-nodosum_M_contig8422.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8422 16343..22566 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8422.5.1 ID=prot_A-nodosum_M_contig8422.5.1|Name=mRNA_A-nodosum_M_contig8422.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=480bp
MVGRALNSQVFTLALDTLQWSTLAPHPLGLNVPSIHGHTAVEDPMHAGRI
IVFGGRGGTHWNTEVLIFNSKQRLWSMAVCEMAPRPPSSIEGRNPSNANI
AGPAIENRGKDASPLRVTFVEPAESAGGTSAAAGRRKEYRQMPHHRSGHT
CFAWDARTSVAMSRGGTAAGVCTDSGSTSNKESGASVSEEAKRSRRGQTN
ERGIKPLFSKSSRSKGGGGKDTTESENGGGVPGERADHAECHVPHPCIIA
FGGSALRPGGGYSEAKLHVLEDPPPESNAKVFEDSELDEEAMTERRKSSL
AEEISGDPGATTRRQSISKFQTCADSVLLKLHSLRQVGNWQPTFESKLDV
SYIGSSARYAILGESEGDVSDKTPWHSPISFGEEDGAVNPKENRLGVFPT
HYEQASFSRETARGSRDDTSSARSAARATNAKHTMLSNSGLTSPAPHHGG
FCCASCQDSSCLGIAEREKNISTRLCFQLD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller