prot_A-nodosum_M_contig84.9.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig84.9.2
Unique Nameprot_A-nodosum_M_contig84.9.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length73
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig84.9.2 vs. uniprot
Match: D7FWJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWJ1_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 1.100e-24
Identity = 52/61 (85.25%), Postives = 56/61 (91.80%), Query Frame = 0 
Query:   13 MGQAVGYSGSEDRVLDSEQEAAEIDGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTP 73
            M QAV YS SE+++LDSEQE  E+DGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTP
Sbjct:    1 MAQAVAYSASEEKILDSEQEP-EMDGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTP 60
[Close]
BLAST of mRNA_A-nodosum_M_contig84.9.2 vs. uniprot
Match: A0A836C8I0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I0_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.460e-8
Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = 0 
Query:   38 GVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTP 73
            G+DPWKAA  GDLDA+L +ID+ GDVN RD +NNTP
Sbjct:    7 GIDPWKAATAGDLDAILTFIDEGGDVNCRDANNNTP 42
[Close]
BLAST of mRNA_A-nodosum_M_contig84.9.2 vs. uniprot
Match: A0A835Z0Q5_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q5_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.280e-7
Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = 0 
Query:   39 VDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTP 73
            VDPWKAA  GDLDA+L YID+ GDVN RD +NNTP
Sbjct:    4 VDPWKAATSGDLDAILTYIDEGGDVNCRDVNNNTP 38
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig84.9.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FWJ1_ECTSI1.100e-2485.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C8I0_9STRA1.460e-869.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0Q5_9STRA1.280e-774.29Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig84contigA-nodosum_M_contig84:17746..21533 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig84.9.2mRNA_A-nodosum_M_contig84.9.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig84 17741..21533 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig84.9.2 ID=prot_A-nodosum_M_contig84.9.2|Name=mRNA_A-nodosum_M_contig84.9.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=73bp
MSKPEERGTGCNMGQAVGYSGSEDRVLDSEQEAAEIDGVDPWKAAMQGDL
DALLQYIDDNGDVNQRDRDNNTP
back to top