prot_A-nodosum_M_contig84.64.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig84.64.1
Unique Nameprot_A-nodosum_M_contig84.64.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length806
Homology
BLAST of mRNA_A-nodosum_M_contig84.64.1 vs. uniprot
Match: D8LQ96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ96_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 2.840e-43
Identity = 173/520 (33.27%), Postives = 244/520 (46.92%), Query Frame = 0
Query:  323 IKLQQQAALCRRKLDKKTRALSVLLRDNWANMVLKQEREMCALRIQLAQSEADLKEHIYSVIGPASGAER-----------------IGAEREGVNKRKGRDNASEVFIGGAEAEVGMFALQGERAHKLRRYLAAKGRHLRRARAEAQQWRSRCEVMESRLHDIFDNFIRGHGQGQPIQD-----RLTSMLLKMLHEKDQRLSVFYKDLAALAAGCSYSPSSKEYDNGRRCYSRRKAADFLLKQMYAAGEEARSHLHRLSLKVRRLETSLANATGAP---GRPPEFAMNQSTVYKPGNIDRRGEAKGVDLQSNAGIMVEDSPLQVKPLHGDAAPLYNAVSEAEVQLATDAYELVLSLRSEVSALESQRAALQSRIDRLEDASAVT----INMSTKASGLEKGGGETVAVAIGNSFAEVPRQDAVAPSSASVFLDAWRT-----------GQADRKARAAAILLQALKSEHSQPTRPSSQVPTDATPKQTAGGAKLSDLAVAASLTRESSQCAQEAFVSRR 802
            +K  ++AA   R+LDKKTRAL++LL+D+WAN VLK+E+E  A+R+QLAQ++ADL E + S+ G A G++R                 +G   E   KR+   +  EVF+G     +GM ALQGE A +LR Y+A+KGR L+RAR E++QWR RCE M+ RL     N ++G    +P        +L ++LL ML E+D+R                                                    +H+HRLS +V+RLET+L +  G P   GR  EF +  +           G ++G       G++VE +   + P  G       ++ +  VQ ATDA+ELV SLRSEVSALE  RA LQ+ + R+EDASA T                               E   + AVA    +  L + +T            + +R+ARAAA+L QA+     +          D     T GGA  ++ A    L RE  Q AQE FVSRR
Sbjct: 3010 VKDTEEAARHARELDKKTRALAILLQDDWANAVLKREKETRAVRLQLAQADADLGEQLDSIAGLAVGSKRRARKASVRHSNHAGGGHVGEHEE--EKRETTGHEPEVFLGEGTGGIGMVALQGEGARRLRAYVASKGRDLKRARVESEQWRVRCEAMQRRL----TNVLQGEEGSEPRASTNEGKKLAAILLNMLDERDRR----------------------------------------------------THIHRLSHEVQRLETALRSG-GVPHSSGRT-EFDVAPNVSAGAARHGEEGASRGGFSLREEGVLVETTNT-MSPGQGGHGHSIASIDDV-VQSATDAHELVRSLRSEVSALERHRATLQANLMRIEDASAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRARRAVATPGLNKQLPSTKTRPDRGRDSRKRSRVERRARAAAVLRQAVHGNGGE----------DNEEPATGGGAVEAEEARVVLLAREERQRAQEVFVSRR 3457          
BLAST of mRNA_A-nodosum_M_contig84.64.1 vs. uniprot
Match: A0A6H5KKN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN4_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 2.110e-11
Identity = 50/122 (40.98%), Postives = 73/122 (59.84%), Query Frame = 0
Query:  323 IKLQQQAALCRRKLDKKTRALSVLLRDNWANMVLKQEREMCALRIQLAQSEADLKEHIYSVIGPASGAER-----------------IGAEREGVNKRKGRDNASEVFIGGAEAEVGMFALQ 427
            +K  ++AA   R+LDKKTRAL++LL+D+WAN VLK+E+E  A+R+QLAQ++ADL E +  + G A G++R                 +G   E   +  G +   EVF+GG    +GM ALQ
Sbjct: 2724 VKDTEEAARHARELDKKTRALAILLQDDWANAVLKREKETRAVRLQLAQADADLGEQLDRIAGLAVGSKRRARKASVRHSNHGGGGHVGEHEEEKQEISGHE--PEVFLGGGTGGIGMVALQ 2843          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig84.64.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQ96_ECTSI2.840e-4333.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKN4_9PHAE2.110e-1140.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 445..465
NoneNo IPR availableCOILSCoilCoilcoord: 651..678
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 750..768
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 750..774
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig84contigA-nodosum_M_contig84:232995..239236 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig84.64.1mRNA_A-nodosum_M_contig84.64.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig84 232792..239504 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig84.64.1 ID=prot_A-nodosum_M_contig84.64.1|Name=mRNA_A-nodosum_M_contig84.64.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=806bp
MGSNAAEDLLSSPELGSGQFSRDVLSHFLNHDPPGQMSRQQFGTGTLVDS
SDLSPGTDTSRGRRGFCDASCRSVVERDRGPSSELHRDTNNSTHVGNIFR
KDNRSTSDSGDIKMTGRRSGHSSTPNNYLPAIDREDSEILARETTRKYGC
DGGHVKTTKSCCTRCSNKDIQGRGGANHRRYDEIINSGGDSANTSMKGVI
GSCIDQPWTDGLREIPVHERRVVKRATYTTSHFVRSSPCGWSTQQAGLTR
HVDTEDSARWKSKGRLSSPQLDPTFRRVILRHLQRINRSAKARCWSKLAA
AAAFSAATAASAKRLLTLEVYTIKLQQQAALCRRKLDKKTRALSVLLRDN
WANMVLKQEREMCALRIQLAQSEADLKEHIYSVIGPASGAERIGAEREGV
NKRKGRDNASEVFIGGAEAEVGMFALQGERAHKLRRYLAAKGRHLRRARA
EAQQWRSRCEVMESRLHDIFDNFIRGHGQGQPIQDRLTSMLLKMLHEKDQ
RLSVFYKDLAALAAGCSYSPSSKEYDNGRRCYSRRKAADFLLKQMYAAGE
EARSHLHRLSLKVRRLETSLANATGAPGRPPEFAMNQSTVYKPGNIDRRG
EAKGVDLQSNAGIMVEDSPLQVKPLHGDAAPLYNAVSEAEVQLATDAYEL
VLSLRSEVSALESQRAALQSRIDRLEDASAVTINMSTKASGLEKGGGETV
AVAIGNSFAEVPRQDAVAPSSASVFLDAWRTGQADRKARAAAILLQALKS
EHSQPTRPSSQVPTDATPKQTAGGAKLSDLAVAASLTRESSQCAQEAFVS
RRFWE*
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