prot_A-nodosum_M_contig84.18.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig84.18.1
Unique Nameprot_A-nodosum_M_contig84.18.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length124
Homology
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BLAST of mRNA_A-nodosum_M_contig84.18.1 vs. uniprot
Match: D7FWJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWJ1_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 1.280e-5
Identity = 26/43 (60.47%), Postives = 30/43 (69.77%), Query Frame = 0 
Query:   33 DKSARNKRGRKPGDVFCPQVAVYNKERIKRMLGMGVPHANKDP 75
            ++ ARNK+GRKPGDVF P V    KERIK MLGMG   A+  P
Sbjct:  181 NRLARNKKGRKPGDVFSPTVEDDKKERIKIMLGMGTADASAQP 223
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig84.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWJ1_ECTSI1.280e-560.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 106..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..123
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 7..39
score: 8.613973
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..63
e-value: 1.4E-9
score: 39.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..47
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 9..38
e-value: 2.0E-4
score: 21.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 7..39
score: 9.965

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig84contigA-nodosum_M_contig84:22652..23608 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig84.18.1mRNA_A-nodosum_M_contig84.18.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig84 22652..23608 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig84.18.1 ID=prot_A-nodosum_M_contig84.18.1|Name=mRNA_A-nodosum_M_contig84.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=124bp
IEAKERKLFTPLWRAAYYGHPQAVEVLLLKGADKSARNKRGRKPGDVFCP
QVAVYNKERIKRMLGMGVPHANKDPEPRDETVGPEPRGPAAEPPPYKARA
DNTEELDNVDLQMQELNQGVVEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt