prot_A-nodosum_M_contig8396.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8396.1.1
Unique Nameprot_A-nodosum_M_contig8396.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length250
Homology
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 1.360e-47
Identity = 103/240 (42.92%), Postives = 137/240 (57.08%), Query Frame = 0
Query:   19 KPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFDRKLLTSDQCWR 250
            K G+ GVG+A++E++  ++G  G   E IS RL+KV +        TF+VGYAPT T  T        K  FW  L + + EV + DHL+++MDANARTG R   GG  DA+VLG YGRD +N+NG RL   A + + S+  T+F TPK G      +    KE YR  LD+IL+RQ  RR VRN++V       SDH LV  ++RL  R APNRR R   G   +  D + L  D+  R
Sbjct:   47 KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRR--GGCCDAKVLGAYGRDIMNNNGERLFGLASDNQFSLANTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVRGNSGSSRIRIDLERLRKDKHLR 282          
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5KSV0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV0_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 6.590e-46
Identity = 100/240 (41.67%), Postives = 139/240 (57.92%), Query Frame = 0
Query:   19 KPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFDRKLLTSDQCWR 250
            K G+ GVG+A++E++  ++G  G   E IS RL+KV +        TF++GYAPT T  T        K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +N+NG RLL  A + +LS+  T+F TPK G      +    KE YR  LD+IL+RQ  RR VR+++V       SDH LV  ++RL  R APNRR R   G   +  D + L  D+  R
Sbjct:   47 KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVMGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGAQHTFQSSNTGKEKYR--LDFILMRQTDRRFVRDVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVRGNSGSSRIRIDLERLRKDKHLR 282          
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 7.790e-45
Identity = 99/240 (41.25%), Postives = 136/240 (56.67%), Query Frame = 0
Query:   19 KPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFDRKLLTSDQCWR 250
            K G+ GVG+ ++E++  ++G  G   E I  RL+KV +         F+VGYAPT T  T        K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +N+NG RLL  A + +LS+  T+F TPK G      +    KE YR  LD+IL+RQ  RR VRN++V       SDH LV  ++RL  R APNRR R   G   +  D + L  D+  R
Sbjct:  150 KRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVRGNSGSRRIRIDLERLRKDKHLR 385          
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5KCV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV1_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 2.780e-44
Identity = 100/240 (41.67%), Postives = 136/240 (56.67%), Query Frame = 0
Query:   19 KPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFDRKLLTSDQCWR 250
            K G+ GVG+A++E++  ++G  G   E IS RL+KV +        TF+VGYAPT T  T        K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +N+NG RLL  A + +LS+  T+  TPK G      +    KE Y   LD+IL+RQ  RR VRN++V       SDH LV  ++RL  R APNRR R   G   +  D   L  D+  R
Sbjct:   79 KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDDNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYSRTPKGGVQQTFQSSNKGKEKYC--LDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVRGNSGSSRIRIDLGRLRKDKHLR 314          
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 9.280e-44
Identity = 101/240 (42.08%), Postives = 138/240 (57.50%), Query Frame = 0
Query:   19 KPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFDRKLLTSDQCWR 250
            K G+ GVG+A++E++  ++G  G   E IS RL+KV +        TF+V YAPT T  T        K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +N+NG RLL  A + +LS+  T+F TPK G      +    KE YR  LD+IL+RQ  RR VRN++V       SDH LV  ++RL  R APNRR R   G   +  D + L  D+  R
Sbjct:  726 KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVRGNSGSSRIRIDLERLRKDKHLR 961          
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 9.460e-44
Identity = 100/236 (42.37%), Postives = 137/236 (58.05%), Query Frame = 0
Query:   19 KPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFDRKLLTSD 246
            K G+ GVG+A++E++  ++G  G   E IS RL+KV +        TF+VGYAPT TA          K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +N+NG RLL  A + +LS++ T+F TPK G      +    KE +R  LD+IL+RQ  RRLVRN +V       SDH LV  ++R   R APNRR R   G   +  D + L  D
Sbjct:   47 KRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVRSPPRVAPNRRTRGNSGSSRIRIDLERLRKD 278          
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 9.670e-44
Identity = 100/236 (42.37%), Postives = 137/236 (58.05%), Query Frame = 0
Query:   19 KPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFDRKLLTSD 246
            K G+ GVG+A++E++  ++G  G   E IS RL+KV +        TF+VGYAPT TA          K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +N+NG RLL  A + +LS++ T+F TPK G      +    KE +R  LD+IL+RQ  RRLVRN +V       SDH LV  ++R   R APNRR R   G   +  D + L  D
Sbjct:  159 KRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVRSPPRVAPNRRTRGNSGSSRIRIDLERLRKD 390          
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5K259_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K259_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 9.910e-44
Identity = 95/216 (43.98%), Postives = 128/216 (59.26%), Query Frame = 0
Query:   19 KPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRR 226
            K G+ GVG+A++E++  ++G  G   E I+ RL+KV +        TF+VGYAPT T  T        K  FW  L   + EV + DHL+++MDANARTG R +G    DA+++G YGRD +N+NG RLL  A   +LS+  T+F TPK G      +    KE YR  LD+IL+RQ  RR VRN++V       SDH LV  ++RL  R APNRR
Sbjct:   47 KRGVHGVGIAIKEAMWESVGEKGRTVECINPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDGEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASGNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRR 258          
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5L7A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A7_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 9.940e-44
Identity = 99/229 (43.23%), Postives = 134/229 (58.52%), Query Frame = 0
Query:   19 KPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFD 239
            K G+ GVG+A++E++  ++G  G   E IS RL+KV +        TF+VGYAPT T  T        K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +N+NG RLL  A + +LS+  T+F TPK G      +    KE YR  LD+IL+RQ  RR VRN++V       SDH LV  ++RL  R APNRR R   G   +  D
Sbjct:   47 KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVRGNSGSSRIRID 271          
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 5.640e-43
Identity = 95/216 (43.98%), Postives = 130/216 (60.19%), Query Frame = 0
Query:   19 KPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRR 226
            K G+ GVG+A++E++  ++G  G   E IS RL+KV +        TF+VGYAPT T  T        K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +N+NG RLL  A + +LS+  T+F TPK G      +    KE YR  LD+I +RQ  RR VRN++V       SDH+LV  ++RL  R APNRR
Sbjct:  244 KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFIFMRQADRRFVRNVSVKRVDFKDSDHKLVLTTVRLPPRVAPNRR 455          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBZ6_9PHAE1.360e-4742.92Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KSV0_9PHAE6.590e-4641.67Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KV75_9PHAE7.790e-4541.25Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KCV1_9PHAE2.780e-4441.67Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K1H7_9PHAE9.280e-4442.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC90_9PHAE9.460e-4442.37Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JQH5_9PHAE9.670e-4442.37Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K259_9PHAE9.910e-4443.98Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5L7A7_9PHAE9.940e-4443.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3Q1_9PHAE5.640e-4343.98Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 4..216
e-value: 2.3E-18
score: 68.4
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 18..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8396contigA-nodosum_M_contig8396:21822..22571 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8396.1.1mRNA_A-nodosum_M_contig8396.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8396 21671..22571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8396.1.1 ID=prot_A-nodosum_M_contig8396.1.1|Name=mRNA_A-nodosum_M_contig8396.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=250bp
MGGQPSKHCSGHCDGDGGKPGILGVGLAVRESIARALGPNGIVPEHISAR
LLKVTVIFKHRAATTFIVGYAPTNTAATCHKSKFWKELRSTVAEVPASDH
LILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKL
SIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITV
HPKMKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFDRKLLTSDQCWR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf