mRNA_A-nodosum_M_contig8396.1.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig8396.1.1
Unique NamemRNA_A-nodosum_M_contig8396.1.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 4.650e-47
Identity = 106/249 (42.57%), Postives = 140/249 (56.22%), Query Frame = 2
Query:  179 SGHCDGDGGKPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFDRKLLTSDQCWR 901
            SG   G   K G+ GVG+A++E++  ++G  G   E IS RL+KV +        TF+VGYAPT T  T        K  FW  L + + EV + DHL+++MDANARTG R   GG  DA+VLG YGRD +N+NG RL   A + + S+  T+F TPK G      +    KE YR  LD+IL+RQ  RR VRN++V       SDH LV  ++RL  R APNRR R   G   +  D + L  D+  R
Sbjct:   38 SGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRR--GGCCDAKVLGAYGRDIMNNNGERLFGLASDNQFSLANTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVRGNSGSSRIRIDLERLRKDKHLR 282          
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5KSV0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV0_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 2.260e-45
Identity = 103/249 (41.37%), Postives = 142/249 (57.03%), Query Frame = 2
Query:  179 SGHCDGDGGKPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFDRKLLTSDQCWR 901
            SG   G   K G+ GVG+A++E++  ++G  G   E IS RL+KV +        TF++GYAPT T  T        K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +N+NG RLL  A + +LS+  T+F TPK G      +    KE YR  LD+IL+RQ  RR VR+++V       SDH LV  ++RL  R APNRR R   G   +  D + L  D+  R
Sbjct:   38 SGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVMGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGAQHTFQSSNTGKEKYR--LDFILMRQTDRRFVRDVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVRGNSGSSRIRIDLERLRKDKHLR 282          
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 2.640e-44
Identity = 102/249 (40.96%), Postives = 139/249 (55.82%), Query Frame = 2
Query:  179 SGHCDGDGGKPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFDRKLLTSDQCWR 901
            SG   G   K G+ GVG+ ++E++  ++G  G   E I  RL+KV +         F+VGYAPT T  T        K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +N+NG RLL  A + +LS+  T+F TPK G      +    KE YR  LD+IL+RQ  RR VRN++V       SDH LV  ++RL  R APNRR R   G   +  D + L  D+  R
Sbjct:  141 SGARAGTKDKRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVRGNSGSRRIRIDLERLRKDKHLR 385          
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5KCV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV1_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 9.340e-44
Identity = 103/249 (41.37%), Postives = 139/249 (55.82%), Query Frame = 2
Query:  179 SGHCDGDGGKPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFDRKLLTSDQCWR 901
            SG   G   K G+ GVG+A++E++  ++G  G   E IS RL+KV +        TF+VGYAPT T  T        K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +N+NG RLL  A + +LS+  T+  TPK G      +    KE Y   LD+IL+RQ  RR VRN++V       SDH LV  ++RL  R APNRR R   G   +  D   L  D+  R
Sbjct:   70 SGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDDNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYSRTPKGGVQQTFQSSNKGKEKYC--LDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVRGNSGSSRIRIDLGRLRKDKHLR 314          
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5K259_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K259_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 3.270e-43
Identity = 98/225 (43.56%), Postives = 131/225 (58.22%), Query Frame = 2
Query:  179 SGHCDGDGGKPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRR 829
            SG   G   K G+ GVG+A++E++  ++G  G   E I+ RL+KV +        TF+VGYAPT T  T        K  FW  L   + EV + DHL+++MDANARTG R +G    DA+++G YGRD +N+NG RLL  A   +LS+  T+F TPK G      +    KE YR  LD+IL+RQ  RR VRN++V       SDH LV  ++RL  R APNRR
Sbjct:   38 SGARAGTKDKRGVHGVGIAIKEAMWESVGEKGRTVECINPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDGEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASGNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRR 258          
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 3.330e-43
Identity = 104/249 (41.77%), Postives = 141/249 (56.63%), Query Frame = 2
Query:  179 SGHCDGDGGKPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFDRKLLTSDQCWR 901
            SG   G   K G+ GVG+A++E++  ++G  G   E IS RL+KV +        TF+V YAPT T  T        K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +N+NG RLL  A + +LS+  T+F TPK G      +    KE YR  LD+IL+RQ  RR VRN++V       SDH LV  ++RL  R APNRR R   G   +  D + L  D+  R
Sbjct:  717 SGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVRGNSGSSRIRIDLERLRKDKHLR 961          
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 3.400e-43
Identity = 103/245 (42.04%), Postives = 140/245 (57.14%), Query Frame = 2
Query:  179 SGHCDGDGGKPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFDRKLLTSD 889
            SG   G   K G+ GVG+A++E++  ++G  G   E IS RL+KV +        TF+VGYAPT TA          K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +N+NG RLL  A + +LS++ T+F TPK G      +    KE +R  LD+IL+RQ  RRLVRN +V       SDH LV  ++R   R APNRR R   G   +  D + L  D
Sbjct:   38 SGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVRSPPRVAPNRRTRGNSGSSRIRIDLERLRKD 278          
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 3.500e-43
Identity = 103/245 (42.04%), Postives = 140/245 (57.14%), Query Frame = 2
Query:  179 SGHCDGDGGKPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFDRKLLTSD 889
            SG   G   K G+ GVG+A++E++  ++G  G   E IS RL+KV +        TF+VGYAPT TA          K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +N+NG RLL  A + +LS++ T+F TPK G      +    KE +R  LD+IL+RQ  RRLVRN +V       SDH LV  ++R   R APNRR R   G   +  D + L  D
Sbjct:  150 SGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVRSPPRVAPNRRTRGNSGSSRIRIDLERLRKD 390          
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5L7A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A7_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 3.500e-43
Identity = 102/238 (42.86%), Postives = 137/238 (57.56%), Query Frame = 2
Query:  179 SGHCDGDGGKPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFD 868
            SG   G   K G+ GVG+A++E++  ++G  G   E IS RL+KV +        TF+VGYAPT T  T        K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +N+NG RLL  A + +LS+  T+F TPK G      +    KE YR  LD+IL+RQ  RR VRN++V       SDH LV  ++RL  R APNRR R   G   +  D
Sbjct:   38 SGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVRGNSGSSRIRID 271          
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Match: A0A6H5JVI3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI3_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 1.070e-42
Identity = 120/318 (37.74%), Postives = 161/318 (50.63%), Query Frame = 2
Query:    2 QHVRKGWWLPHGTSAPCLREGPTAR-GTRRIF*CLLQSTSATSS--PYRRLAAMGGQPSKHCSGHC-------DGDGGKPGILGVGLAVRESIARALGPNGIVPEHISARLLKVTVIFKHRAATTFIVGYAPTNTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKLSIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFDRKLLTSDQCWR 901
            +H R   W    T      + P+ R G RR      +S  +T+S  P R      GQ S    G+         G     G+ GVG+A++E++  ++G  G   E IS RL+KV +        TF+VGYAPT T  T        K  FW  L + + EV + DHLI+ MDANARTG R  G    DA+++G Y RD +N+NG RLL  A + +LS+  T+F TPK G      +    KE YR  LD+IL+RQ  RR VRN++V       SDH LV  ++RL  R APNRR R   G   +  D + L  D+  R
Sbjct:   90 KHTRNARWTERDTRP----QRPSRRLGRRRHERATYRSARSTTSGDPTRGETRREGQGSIAHDGYVIIWSGARAGTKDNRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLIVPMDANARTGRRRHG--CCDAKIMGAYERDIINNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVRGNSGSSRIRIDLERLRKDKHLR 399          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8396.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBZ6_9PHAE4.650e-4742.57Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KSV0_9PHAE2.260e-4541.37Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KV75_9PHAE2.640e-4440.96Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KCV1_9PHAE9.340e-4441.37Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K259_9PHAE3.270e-4343.56Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K1H7_9PHAE3.330e-4341.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC90_9PHAE3.400e-4342.04Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JQH5_9PHAE3.500e-4342.04Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L7A7_9PHAE3.500e-4342.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVI3_9PHAE1.070e-4237.74Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8396contigA-nodosum_M_contig8396:21671..22571 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog13616.ENSMODP00000036345
PFAMsExo_endo_phos,Exo_endo_phos_2
Model size901
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.52e-17
EggNOG OGsKOG1075@1|root,KOG1075@2759|Eukaryota,39VM0@33154|Opisthokonta,3BPUP@33208|Metazoa,3D6HY@33213|Bilateria,48CXU@7711|Chordata,4992I@7742|Vertebrata,3JJKA@40674|Mammalia
DescriptionEndonuclease/Exonuclease/phosphatase family
Cds size750
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870193.9143424-UTR-A-nodosum_M_contig8396:21670..218211680870193.9143424-UTR-A-nodosum_M_contig8396:21670..21821Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig8396 21671..21821 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870193.9287019-CDS-A-nodosum_M_contig8396:21821..225711680870193.9287019-CDS-A-nodosum_M_contig8396:21821..22571Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8396 21822..22571 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8396.1.1prot_A-nodosum_M_contig8396.1.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig8396 21822..22571 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig8396.1.1

>prot_A-nodosum_M_contig8396.1.1 ID=prot_A-nodosum_M_contig8396.1.1|Name=mRNA_A-nodosum_M_contig8396.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=250bp
MGGQPSKHCSGHCDGDGGKPGILGVGLAVRESIARALGPNGIVPEHISAR
LLKVTVIFKHRAATTFIVGYAPTNTAATCHKSKFWKELRSTVAEVPASDH
LILMMDANARTGGRGEGGGLRDARVLGPYGRDTLNDNGSRLLACAVEYKL
SIVKTFFSTPKRGGNSDAFTYEGPKESYRWRLDYILVRQHGRRLVRNITV
HPKMKSDHRLVSASIRLLGRNAPNRRRRPEEGHHGVPFDRKLLTSDQCWR
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mRNA from alignment at A-nodosum_M_contig8396:21671..22571+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig8396.1.1 ID=mRNA_A-nodosum_M_contig8396.1.1|Name=mRNA_A-nodosum_M_contig8396.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=901bp|location=Sequence derived from alignment at A-nodosum_M_contig8396:21671..22571+ (Ascophyllum nodosum dioecious)
GCAGCACGTTCGAAAGGGCTGGTGGTTGCCACATGGAACGTCCGCACCAT GTCTGAGAGAGGGACCAACGGCCCGGGGCACGCGGAGGATCTTTTGATGT TTGCTGCAAAGTACGAGTGCGACTTCATCGCCATACAGGAGACTCGCCGC GATGGGAGGACAACCATCCAAGCACTGCAGCGGTCATTGTGATGGTGATG GAGGTAAGCCCGGGATACTCGGAGTTGGTCTGGCTGTCAGGGAGTCTATC GCTCGCGCACTCGGTCCAAATGGCATTGTGCCGGAACACATCAGTGCGCG ACTGCTGAAGGTGACGGTGATCTTCAAACACAGAGCCGCCACAACCTTCA TCGTGGGATACGCTCCGACTAACACAGCAGCCACCTGTCACAAGTCTAAG TTCTGGAAGGAACTTCGCAGCACTGTTGCTGAGGTGCCTGCCAGCGACCA CTTGATTTTGATGATGGATGCTAACGCCCGTACGGGAGGCAGGGGAGAGG GAGGTGGACTACGGGATGCCCGGGTTTTGGGACCATACGGCAGAGACACT CTCAATGACAACGGGTCGCGACTTCTAGCATGTGCTGTCGAGTACAAGCT GTCGATTGTCAAGACCTTTTTCAGCACGCCGAAGCGTGGGGgaAACTCGG ATGCGTTcaCATACGAGGGGCCGAAGGAATCCTATCGCTGGCGCCTGGAC TACATCCTGGTACGCCAGCATGGCCGCAGGCTCGTCCGGAATATCACTGT CCACCCGAAGATGAAATCAGACCACCGCCTGGTTTCAGCTTCCATTCGCC TCCTAGGACGGAACGCAcCCAACCGCCGCCGGAGACCGGAAGAAGGGCAC CACGGGGTACCCTTCGACCGGAAACTCCTGACGTCTGATCAGTGCTGGAG G
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Coding sequence (CDS) from alignment at A-nodosum_M_contig8396:21671..22571+

>mRNA_A-nodosum_M_contig8396.1.1 ID=mRNA_A-nodosum_M_contig8396.1.1|Name=mRNA_A-nodosum_M_contig8396.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=750bp|location=Sequence derived from alignment at A-nodosum_M_contig8396:21671..22571+ (Ascophyllum nodosum dioecious)
ATGGGAGGACAACCATCCAAGCACTGCAGCGGTCATTGTGATGGTGATGG
AGGTAAGCCCGGGATACTCGGAGTTGGTCTGGCTGTCAGGGAGTCTATCG
CTCGCGCACTCGGTCCAAATGGCATTGTGCCGGAACACATCAGTGCGCGA
CTGCTGAAGGTGACGGTGATCTTCAAACACAGAGCCGCCACAACCTTCAT
CGTGGGATACGCTCCGACTAACACAGCAGCCACCTGTCACAAGTCTAAGT
TCTGGAAGGAACTTCGCAGCACTGTTGCTGAGGTGCCTGCCAGCGACCAC
TTGATTTTGATGATGGATGCTAACGCCCGTACGGGAGGCAGGGGAGAGGG
AGGTGGACTACGGGATGCCCGGGTTTTGGGACCATACGGCAGAGACACTC
TCAATGACAACGGGTCGCGACTTCTAGCATGTGCTGTCGAGTACAAGCTG
TCGATTGTCAAGACCTTTTTCAGCACGCCGAAGCGTGGGGgaAACTCGGA
TGCGTTcaCATACGAGGGGCCGAAGGAATCCTATCGCTGGCGCCTGGACT
ACATCCTGGTACGCCAGCATGGCCGCAGGCTCGTCCGGAATATCACTGTC
CACCCGAAGATGAAATCAGACCACCGCCTGGTTTCAGCTTCCATTCGCCT
CCTAGGACGGAACGCAcCCAACCGCCGCCGGAGACCGGAAGAAGGGCACC
ACGGGGTACCCTTCGACCGGAAACTCCTGACGTCTGATCAGTGCTGGAGG
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