prot_A-nodosum_M_contig838.8.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig838.8.1
Unique Nameprot_A-nodosum_M_contig838.8.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length186
Homology
BLAST of mRNA_A-nodosum_M_contig838.8.1 vs. uniprot
Match: D7FKD0_ECTSI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKD0_ECTSI)

HSP 1 Score: 292 bits (748), Expect = 9.660e-99
Identity = 131/186 (70.43%), Postives = 158/186 (84.95%), Query Frame = 0
Query:    1 MYAYLMYVTTVLCVRTCQVGDVKFGNLMGKDAHGNKYYENKDYPYGQHRWVEYADIHNYDSSTVTAAWHPWLHHMSDHAP-ATSELPEMKPIPISVGHHTPYDNFVAPGRVDDVNRTTWRPRGAGVGNIFQKPGEPELYFKQPGHPLNPVAKAGGRFSKQKNMEIWDPADPKGDTSKKPIRELKEV 185
            M AY  +       +   VGD+KFG+L G+D+HGNKYYENKDYPYGQHRWVEYADIHNYDSS+VTA+WHPWLHHMSDH P A +ELPEMKPI I+VG HTP+++FVAPGRVDDVNR+TWRPRGAG+GNI+Q+PGEP++Y+KQPGHP + ++  GGRFSKQK+ME WDP DPKG  +K+PIR+L EV
Sbjct:   10 MQAYRQFGLRAALTKMYTVGDIKFGDLKGEDSHGNKYYENKDYPYGQHRWVEYADIHNYDSSSVTASWHPWLHHMSDHTPSAAAELPEMKPIEIAVGQHTPHNDFVAPGRVDDVNRSTWRPRGAGMGNIWQEPGEPDMYYKQPGHPQHALSDKGGRFSKQKSMETWDPKDPKGLNTKQPIRDLTEV 195          
BLAST of mRNA_A-nodosum_M_contig838.8.1 vs. uniprot
Match: A0A835ZAE7_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE7_9STRA)

HSP 1 Score: 179 bits (454), Expect = 4.350e-54
Identity = 89/170 (52.35%), Postives = 110/170 (64.71%), Query Frame = 0
Query:   19 VGDVKFGNLMGKDAHGNKYYENKDYPYGQHRWVEYADIHNYDSSTVTAAWHPWLHHMSDHAPATSELPEMKPIPISVGHHTPYDNFVAPGRVDDV---NRTTWRPRGAGVGNIFQKPGEPELYFKQPGHPLNPVAKAGGRFSKQKNMEIWDPADPKGDTSKKPIRELKEV 185
            VG++ FG+  G D++GNKYYEN+   YG HRWVEYAD HNYDSSTVT  WH WLH+M D  P  S  P+   +  S     PYD  V P     V   N + +RPRG GVGN+FQK GEPELY+KQPGHP NP++  GGRF+ +  +E  DP +P     KKP+R L E+
Sbjct:   24 VGEINFGDFKGADSNGNKYYENRSKIYGTHRWVEYADCHNYDSSTVTPEWHGWLHNMHDTPPDQSADPKRHEL-TSSHDDCPYDTHVGPASAAPVLHQNLSGFRPRGYGVGNLFQKWGEPELYYKQPGHPANPISDKGGRFNTEPEVEFADPNNPTMLNPKKPLRSLDEL 192          
BLAST of mRNA_A-nodosum_M_contig838.8.1 vs. uniprot
Match: W7TFP2_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFP2_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.330e-49
Identity = 84/174 (48.28%), Postives = 110/174 (63.22%), Query Frame = 0
Query:   19 VGDVKFGNLMGKDAHGNKYYENKDYPYGQHRWVEYADIHNYDSSTVTAAWHPWLHHMSDHAPATSELPEMKPIPISVGHHTPYDNFVAPGRVD-----DVNRTTWRPRGAGVGNIFQKPGEPELYFKQPGHPLNPVAKA---GGRFSKQKNMEIWDPADPKGDTSKKPIRELKE 184
            +G+VKFG+L G D +GNKY+EN +YP+GQHRWVEY DIHNY+ S++   WH W+HHM+D  PA         + I+ G HTPY   VA G  D      +N T  R RG GVG++ QK GEP+ ++ QPGHPL    +    GGRF   K  E W+P+DP+G  + +PIR L E
Sbjct:   27 MGEVKFGDLKGVDVNGNKYFENVEYPFGQHRWVEYKDIHNYEPSSIPPEWHGWIHHMTDEVPAGKAGVTEPGMKIAEGQHTPYQ--VAAGLTDYQMEGQLNWTAHRSRGYGVGSLHQKAGEPDKFWVQPGHPLAAKKQEKGKGGRFEGLKGYEAWNPSDPEGKKTAQPIRSLDE 198          
BLAST of mRNA_A-nodosum_M_contig838.8.1 vs. uniprot
Match: A0A4D9CLK1_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLK1_9STRA)

HSP 1 Score: 168 bits (425), Expect = 7.130e-49
Identity = 84/174 (48.28%), Postives = 110/174 (63.22%), Query Frame = 0
Query:   19 VGDVKFGNLMGKDAHGNKYYENKDYPYGQHRWVEYADIHNYDSSTVTAAWHPWLHHMSDHAPATSELPEMKPIPISVGHHTPYDNFVAPGRVD-----DVNRTTWRPRGAGVGNIFQKPGEPELYFKQPGHPLNPVAKA---GGRFSKQKNMEIWDPADPKGDTSKKPIRELKE 184
            +G+VKFG+L G D +GNKY+EN +YP+GQHRWVEY DIHNY+ S++   WH W+HHM+D  PA         + I+ G HTPY   VA G  D      +N T  R RG GVG++ QK GEP+ ++ QPGHPL    +    GGRF   K  E W+P+DP+G  + +PIR L E
Sbjct:   84 MGEVKFGDLKGVDVNGNKYFENVEYPFGQHRWVEYKDIHNYEPSSIPPEWHGWIHHMTDEVPAGKAGVTEPGMKIAEGQHTPYQ--VATGLTDYQMEGQLNWTAHRSRGYGVGSLHQKAGEPDKFWVQPGHPLAAKKQEKGKGGRFEGLKGYEAWNPSDPEGKKTAQPIRSLDE 255          
BLAST of mRNA_A-nodosum_M_contig838.8.1 vs. uniprot
Match: A0A7S0XDH0_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDH0_9STRA)

HSP 1 Score: 143 bits (361), Expect = 3.780e-40
Identity = 67/152 (44.08%), Postives = 94/152 (61.84%), Query Frame = 0
Query:   14 VRTCQVGDVKFGNLMGKDAHGNKYYENKDYPYGQHRWVEYADIHNYDSSTVTAAWHPWLHHMSDHAPATSELPEMKPIPISVGHHTPYDNFVAPGRVD---DVNRTTWRPRGAGVGNIFQKPGEPELYFKQPGHPLNPVAKAGGRFSKQKNM 162
            ++   +GD+KFG L G D  GNKYYE+   P+ QHRW+EYADIH++D+S +   WH W+HHM D  P    +     IP++   H  Y N V    V+    VN TT+R RG  VG++   P EP+ Y+KQPGHPL+P+ + GGR+   K++
Sbjct:   22 IQIYMIGDIKFGVLKGTDRFGNKYYEDLSAPFNQHRWIEYADIHDFDASMIQPEWHGWMHHMYDEVPGEGTI--KTGIPLTPVSHAVYKNHVGYSNVEPLEQVNLTTYRSRGYKVGSLKTGPDEPDRYYKQPGHPLHPLVEKGGRYKHIKSI 171          
BLAST of mRNA_A-nodosum_M_contig838.8.1 vs. uniprot
Match: A0A7S2GA95_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GA95_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.250e-38
Identity = 76/163 (46.63%), Postives = 98/163 (60.12%), Query Frame = 0
Query:   19 VGDVKFGNLMGKDAHGNKYYENKDYPYGQHRWVEYADIHNYDSSTVTAAWHPWLHHMSDHAPAT------SELPEMKPIPISVGHHTPYDNFVAPGRVDD---VNRTTWRPRGAGVGNIFQKPGEPELYFKQPGHPLNPVAKAGGRFSKQKNMEIWDPADPKG 172
            +GD+KFG  +G D +GN+Y+EN DYP+GQHRWVEYADIHNYD+++V   WH W+ HM D AP +      +E  + K + I  G H+ YD+ V     +    +N T  R RG  +G I QKP E + Y K  G   N  +   GRF  QK ME WDPADP G
Sbjct:   65 LGDIKFGECVGTDVNGNQYFENLDYPHGQHRWVEYADIHNYDAASVPPEWHGWMTHMQD-APGSDAREFITEKLKTK-LEIDKGDHSIYDHHVGHTTYEMDTLLNHTMHRKRGFNIGGIKQKPEEEDKYHKHAGSAQNKGST--GRFESQKGMEYWDPADPDG 223          
BLAST of mRNA_A-nodosum_M_contig838.8.1 vs. uniprot
Match: A0A7S2B0X3_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B0X3_9STRA)

HSP 1 Score: 130 bits (328), Expect = 3.790e-35
Identity = 72/173 (41.62%), Postives = 99/173 (57.23%), Query Frame = 0
Query:   19 VGDVKFGNLMGKDAHGNKYYENKDYPYGQHRWVEYADIHNYDSSTVTAAWHPWLHHMSDHAPATSEL---PEMKPIPISVGHHTPYDN---FVAPGRVDDVNRTTWRPRGAGVGNIFQKPGEPELYFKQPGHPLNPVAKAG-GRFSKQKNMEIWDPADPKGDTSKKPIRELKE 184
            +GDVKFG  +G D +GN+Y+EN DYP+GQHRWV Y DIHNYD++ +   WH W+ HM D     SE     ++K      G    YD    + A      +N T +R RG  +G+I Q P +P+ +    GH LN   K G GR+ +QK M +W+P DP+G+ +  P R L E
Sbjct:   14 LGDVKFGTCVGTDVNGNQYFENTDYPHGQHRWVVYRDIHNYDAAAIPPEWHGWMCHMVDAPGPDSEKFIEDKLKTKCEIDGGDECYDTHLGYTAYEMDPLLNYTNFRKRGYKIGSIKQLPDDPDAFHVHAGHALN---KGGTGRYLEQKGMHLWNPEDPEGEEAPVPTRSLAE 183          
BLAST of mRNA_A-nodosum_M_contig838.8.1 vs. uniprot
Match: A0A7S3HS43_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HS43_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.220e-33
Identity = 63/145 (43.45%), Postives = 88/145 (60.69%), Query Frame = 0
Query:   19 VGDVKFGNLMGKDAHGNKYYENKDYPYGQHRWVEYADIHNYDSSTVTAAWHPWLHHMSDHAPATS-ELPEMKPIPISVGHHTPYDNFVAPGRVD---------DVNRTTWRPRGAGVGNIFQKPGEPELYFKQPGHPLNPVAKAG 153
            +GD+KFG L G D  GNKY+EN+D P+GQHRWVEY +IHNYDS+ +   WH W+HH+ D  P     +P+   +P S   H  Y+  V  GRVD          ++ T +R RG  +G++   P E + Y+KQPGHPL+  ++ G
Sbjct:   29 IGDLKFGELKGTDKFGNKYFENQDLPFGQHRWVEYKNIHNYDSTMIQPEWHGWMHHVYDETPNDPVAVPDY--LPTSTISHAIYNTHV--GRVDPAAAANDREQIDTTQYRRRGYKIGSLMTGPDEEDHYYKQPGHPLSKDSEKG 169          
BLAST of mRNA_A-nodosum_M_contig838.8.1 vs. uniprot
Match: A0A7S1UJS8_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJS8_9STRA)

HSP 1 Score: 122 bits (306), Expect = 4.800e-32
Identity = 63/140 (45.00%), Postives = 84/140 (60.00%), Query Frame = 0
Query:   20 GDVKFGNLMGKDAHGNKYYENKDYPYGQHRWVEYADIHNYDSSTVTAAWHPWLHHMSDHAPATS-ELPEMKPIPISVGHHTPYDNFVAPGRVDDV-----NRTTWRPRGAGVGN--IFQKPGEPELYFKQPGHPLNPVAK 151
            G++KFG L+G D  GNKYYEN +YP+ QHRWVE+ DIHN+D+S +   WH W+HH  D  P  +   P ++     V  HTP+D+ V     D V     N T  R RG GVGN  ++  P +P+ Y+KQ  HP+N V K
Sbjct:   27 GEIKFGTLIGMDKMGNKYYENLEYPFPQHRWVEFKDIHNFDASMIPPEWHGWVHHTYDEPPTEAIAKPALEATAEQV--HTPFDHHVGHVSEDFVPENMHNTTQKRARGYGVGNANLYMDPEDPDEYYKQTSHPMNVVPK 164          
BLAST of mRNA_A-nodosum_M_contig838.8.1 vs. uniprot
Match: A0A7S2WF66_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WF66_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.680e-31
Identity = 66/179 (36.87%), Postives = 100/179 (55.87%), Query Frame = 0
Query:   14 VRTCQVGDVKFGNLMGKDAHGNKYYENKDYPYGQHRWVEYADIHNYDSSTVTAAWHPWLHHMSDH-APATSELPEMK---PIPISVGHHTPYDNFV------APGRVDDVNRTTWRPRGAGVGNIFQKPGEPELYFKQPGHPLNPVAKAGGRFSKQKNMEIWDPADPKGDTSKKPIREL 182
            V+   +GD+KFG  +G+D +GN Y+EN +YP+GQHRWVEY DIHN D+S+V   WH W+  M D   P  S   + K    + I    H  Y N +      AP  +  +N+T +R RG  +G    +P + + Y    GH +N  ++  GRF + K + +WDP++ +G+   +P R L
Sbjct:   96 VQAYTMGDIKFGKCVGEDVNGNLYFENNNYPHGQHRWVEYKDIHNLDASSVPPEWHGWMSSMQDAPGPDASGFIDTKMEDALQIDGAEHAVYANHLGLVCSTAPEGM--LNKTGFRKRGYNIGGHKMQPEDSDQYHTHSGHAINKDSR--GRFEETKGVHLWDPSEEEGEAKLQPTRSL 270          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig838.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKD0_ECTSI9.660e-9970.43NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A835ZAE7_9STRA4.350e-5452.35NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
W7TFP2_9STRA1.330e-4948.28NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A4D9CLK1_9STRA7.130e-4948.28NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S0XDH0_9STRA3.780e-4044.08NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S2GA95_9STRA2.250e-3846.63NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S2B0X3_9STRA3.790e-3541.62NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S3HS43_9STRA1.220e-3343.45NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S1UJS8_9STRA4.800e-3245.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S2WF66_9STRA3.680e-3136.87NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12PFAMPF05071NDUFA12coord: 25..86
e-value: 8.8E-19
score: 68.3
IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12PANTHERPTHR12910NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2coord: 18..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..185
NoneNo IPR availablePANTHERPTHR12910:SF2NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12coord: 18..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig838contigA-nodosum_M_contig838:237659..240661 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig838.8.1mRNA_A-nodosum_M_contig838.8.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig838 237054..240661 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig838.8.1 ID=prot_A-nodosum_M_contig838.8.1|Name=mRNA_A-nodosum_M_contig838.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=186bp
MYAYLMYVTTVLCVRTCQVGDVKFGNLMGKDAHGNKYYENKDYPYGQHRW
VEYADIHNYDSSTVTAAWHPWLHHMSDHAPATSELPEMKPIPISVGHHTP
YDNFVAPGRVDDVNRTTWRPRGAGVGNIFQKPGEPELYFKQPGHPLNPVA
KAGGRFSKQKNMEIWDPADPKGDTSKKPIRELKEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007763NDUFA12