prot_A-nodosum_M_contig836.18.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig836.18.1
Unique Nameprot_A-nodosum_M_contig836.18.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length79
Homology
BLAST of mRNA_A-nodosum_M_contig836.18.1 vs. uniprot
Match: A0A836CIL5_9STRA (Dynein light chain roadblock n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIL5_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.350e-35
Identity = 59/78 (75.64%), Postives = 69/78 (88.46%), Query Frame = 0
Query:    1 MEGQVLRRLPTMSQETAELYAEAMRHLAVKARGVARDLNPKGEMKYMRIRAKRHEVLVALDRDFLAIIIQRWQPAGVA 78
            M+GQVLRR PTMSQETAE+YA +M HLA KARGV RDLNPK E+ Y+RIRAKRHEV+VA D++FLAI+IQRWQPAG +
Sbjct:   25 MQGQVLRRFPTMSQETAEMYAASMMHLAHKARGVVRDLNPKSELNYLRIRAKRHEVMVAFDKEFLAIVIQRWQPAGTS 102          
BLAST of mRNA_A-nodosum_M_contig836.18.1 vs. uniprot
Match: A0A6T7GUX9_9STRA (Dynein light chain roadblock n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7GUX9_9STRA)

HSP 1 Score: 109 bits (272), Expect = 2.060e-29
Identity = 51/75 (68.00%), Postives = 63/75 (84.00%), Query Frame = 0
Query:    2 EGQVLRRLPTMSQETAELYAEAMRHLAVKARGVARDLNPKGEMKYMRIRAKRHEVLVALDRDFLAIIIQRWQPAG 76
            +G VLRR P MSQE AE YA++MRHLA KARGV RDLNP+ E++Y+RIRAKRHEV++A D +FL I+IQ+W PAG
Sbjct:   26 QGLVLRRFPQMSQEHAEQYADSMRHLANKARGVVRDLNPQNELRYLRIRAKRHEVMIAFDNEFLVIVIQKWTPAG 100          
BLAST of mRNA_A-nodosum_M_contig836.18.1 vs. uniprot
Match: D7FWL6_ECTSI (Robl_LC7 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWL6_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 1.100e-28
Identity = 53/63 (84.13%), Postives = 58/63 (92.06%), Query Frame = 0
Query:    1 MEGQVLRRLPTMSQETAELYAEAMRHLAVKARGVARDLNPKGEMKYMRIRAKRHEVLVALDRD 63
            MEGQVLRR PTMSQETAE+YAEAMRHLA+KARGV RD+NPKGE+KYMRIRAKRHEVLVA   +
Sbjct:   25 MEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKGELKYMRIRAKRHEVLVAFGEE 87          
BLAST of mRNA_A-nodosum_M_contig836.18.1 vs. uniprot
Match: F0Y2Y8_AURAN (Dynein light chain roadblock n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2Y8_AURAN)

HSP 1 Score: 106 bits (264), Expect = 3.300e-28
Identity = 50/75 (66.67%), Postives = 63/75 (84.00%), Query Frame = 0
Query:    2 EGQVLRRLPTMSQETAELYAEAMRHLAVKARGVARDLNPKGEMKYMRIRAKRHEVLVALDRDFLAIIIQRWQPAG 76
            +GQVLRRLP+M+Q  AE+YA+ M  L+ KARGV RDLNPK E++Y+R+RAKRHEVLVA D++FL I+IQRW PA 
Sbjct:   26 QGQVLRRLPSMTQAQAEIYADFMSQLSRKARGVVRDLNPKNELRYLRLRAKRHEVLVAFDQEFLVIVIQRWTPAS 100          
BLAST of mRNA_A-nodosum_M_contig836.18.1 vs. uniprot
Match: A0A6U1LT09_9STRA (Dynein light chain roadblock n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LT09_9STRA)

HSP 1 Score: 105 bits (262), Expect = 6.860e-28
Identity = 50/75 (66.67%), Postives = 63/75 (84.00%), Query Frame = 0
Query:    2 EGQVLRRLPTMSQETAELYAEAMRHLAVKARGVARDLNPKGEMKYMRIRAKRHEVLVALDRDFLAIIIQRWQPAG 76
            +GQVLRR P+M Q+ AELYA++MR LA KARGV RDLNP+ E++Y+RIRA+R EV+VA D +FL I+IQRWQPA 
Sbjct:   26 QGQVLRRFPSMRQDLAELYADSMRCLAAKARGVVRDLNPQHELRYLRIRARREEVMVAYDNEFLVIVIQRWQPAA 100          
BLAST of mRNA_A-nodosum_M_contig836.18.1 vs. uniprot
Match: A0A7S3H6W3_9STRA (Dynein light chain roadblock n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6W3_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 4.440e-24
Identity = 46/75 (61.33%), Postives = 56/75 (74.67%), Query Frame = 0
Query:    2 EGQVLRRLPTMSQETAELYAEAMRHLAVKARGVARDLNPKGEMKYMRIRAKRHEVLVALDRDFLAIIIQRWQPAG 76
            +GQVLRR PTMS E AE YA  M  L  +ARGV RDL+PK E+ Y+R+RAKRHE++VA D  F+ I+IQRW PA 
Sbjct:   26 QGQVLRRFPTMSLEDAERYATTMISLTTQARGVVRDLDPKNELSYLRVRAKRHEIMVAYDVQFIVIVIQRWTPAA 100          
BLAST of mRNA_A-nodosum_M_contig836.18.1 vs. uniprot
Match: A0A7S0SZ17_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZ17_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 2.340e-21
Identity = 41/73 (56.16%), Postives = 55/73 (75.34%), Query Frame = 0
Query:    3 GQVLRRLPTMSQETAELYAEAMRHLAVKARGVARDLNPKGEMKYMRIRAKRHEVLVALDRDFLAIIIQRWQPA 75
            GQVLRR PTMS + A+ YA  M  L  +ARGV RDL+PK ++KY+R+R+K+HE++VA D  F+ II+QRW  A
Sbjct:   33 GQVLRRFPTMSPDVADEYATKMLSLTTQARGVIRDLSPKNDLKYLRVRSKKHEIMVAFDTQFVVIILQRWSAA 105          
BLAST of mRNA_A-nodosum_M_contig836.18.1 vs. uniprot
Match: H3GEJ8_PHYRM (Dynein light chain roadblock n=25 Tax=Oomycota TaxID=4762 RepID=H3GEJ8_PHYRM)

HSP 1 Score: 84.7 bits (208), Expect = 1.090e-19
Identity = 40/74 (54.05%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    3 GQVLRRLPTMSQETAELYAEAMRHLAVKARGVARDLNPKGEMKYMRIRAKRHEVLVALDRDFLAIIIQRWQPAG 76
            G VLRR P M    AE YA  M+ L  KARGV RDLNPK +++YMR+R K+ E+L+A ++DFL ++IQRW P  
Sbjct:   27 GNVLRRHPQMQVAEAEKYALYMKELTTKARGVVRDLNPKNDLEYMRVRVKKLELLIAHEKDFLVVVIQRWTPTS 100          
BLAST of mRNA_A-nodosum_M_contig836.18.1 vs. uniprot
Match: A0A812SWU6_SYMMI (DYNLRB1 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SWU6_SYMMI)

HSP 1 Score: 83.2 bits (204), Expect = 2.730e-19
Identity = 40/58 (68.97%), Postives = 50/58 (86.21%), Query Frame = 0
Query:    2 EGQVLRRLPTMSQETAELYAEAMRHLAVKARGVARDLNPKGEMKYMRIRAKRHEVLVA 59
            +GQVLRR PTM+QETAE Y+EAM  L+ +AR V RDLNPK E+KY+R+RAKRHE++VA
Sbjct:   25 QGQVLRRFPTMTQETAEQYSEAMMSLSSQARSVVRDLNPKNELKYLRVRAKRHEIMVA 82          
BLAST of mRNA_A-nodosum_M_contig836.18.1 vs. uniprot
Match: A0A485LML8_9STRA (Dynein light chain roadblock n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LML8_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 4.440e-19
Identity = 39/74 (52.70%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    3 GQVLRRLPTMSQETAELYAEAMRHLAVKARGVARDLNPKGEMKYMRIRAKRHEVLVALDRDFLAIIIQRWQPAG 76
            G VLRR P M    AE Y+  M+ L  KARGV RDLNPK +++Y+RIR K+ E+LVA +++FL I+IQ+W P  
Sbjct:   27 GAVLRRHPHMDPANAERYSTYMKELTTKARGVVRDLNPKNDLQYLRIRLKKFEILVAHEKEFLVIVIQKWSPTA 100          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig836.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CIL5_9STRA2.350e-3575.64Dynein light chain roadblock n=1 Tax=Tribonema min... [more]
A0A6T7GUX9_9STRA2.060e-2968.00Dynein light chain roadblock n=1 Tax=Florenciella ... [more]
D7FWL6_ECTSI1.100e-2884.13Robl_LC7 domain-containing protein n=1 Tax=Ectocar... [more]
F0Y2Y8_AURAN3.300e-2866.67Dynein light chain roadblock n=1 Tax=Aureococcus a... [more]
A0A6U1LT09_9STRA6.860e-2866.67Dynein light chain roadblock n=1 Tax=Fibrocapsa ja... [more]
A0A7S3H6W3_9STRA4.440e-2461.33Dynein light chain roadblock n=1 Tax=Spumella elon... [more]
A0A7S0SZ17_9STRA2.340e-2156.16Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
H3GEJ8_PHYRM1.090e-1954.05Dynein light chain roadblock n=25 Tax=Oomycota Tax... [more]
A0A812SWU6_SYMMI2.730e-1968.97DYNLRB1 protein (Fragment) n=1 Tax=Symbiodinium mi... [more]
A0A485LML8_9STRA4.440e-1952.70Dynein light chain roadblock n=7 Tax=Saprolegniace... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.30Dynein light chain 2a, cytoplasmiccoord: 1..73
e-value: 6.4E-17
score: 63.4
NoneNo IPR availableSUPERFAMILY103196Roadblock/LC7 domaincoord: 10..72
IPR004942Roadblock/LAMTOR2 domainPFAMPF03259Robl_LC7coord: 2..68
e-value: 5.5E-12
score: 45.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig836contigA-nodosum_M_contig836:287341..288489 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig836.18.1mRNA_A-nodosum_M_contig836.18.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig836 286675..288489 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig836.18.1 ID=prot_A-nodosum_M_contig836.18.1|Name=mRNA_A-nodosum_M_contig836.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=79bp
MEGQVLRRLPTMSQETAELYAEAMRHLAVKARGVARDLNPKGEMKYMRIR
AKRHEVLVALDRDFLAIIIQRWQPAGVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004942Roadblock/LAMTOR2_dom