prot_A-nodosum_M_contig8356.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8356.1.1
Unique Nameprot_A-nodosum_M_contig8356.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length328
Homology
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 4.940e-38
Identity = 99/221 (44.80%), Postives = 140/221 (63.35%), Query Frame = 0
Query:    5 LVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIFMKLLPFVLTRQPAKRDTICREIGQTVGQVSFWLVLSPVVFIVGTLLWIASSVYTLFVPAAELVNRVPSASTLRDSLSGGSPFKRFL 225
            LV+F ++++VV+LGFAM+  +L  D D     FG   L LFK +LG+V+ F  F    GN+Y      L V+YLVV+ +MLLNLLIAVLST+H+KVE  AD+E +V+K RI+EHYR+VV + ++P PFNLVQ+I    LP V+ R  + + T      + VG+++FWL L PV    GT+LW+ SS++  FV      ++   A   R +LS GS   R+L
Sbjct:  937 LVKFGVVIIVVMLGFAMSFHALFGDVDT----FGGTCLTLFKAMLGEVDFFGSFP---GNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQLILS--LP-VMVRDRSGQGTASTRAQEAVGRMAFWLALGPVAAACGTVLWVLSSLFAPFVWHTHFYSK---AQARRGALSVGSLLVRYL 1144          
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: A0A6H5KJG3_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJG3_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 1.090e-31
Identity = 101/289 (34.95%), Postives = 148/289 (51.21%), Query Frame = 0
Query:    4 VLVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIFMKLLPFV---------------LTRQPAKRDTICREIGQTVGQVSFWLVLSPVVFIVGTLLWIASSVYTLFVPAAELVNRVPSASTLRDSLSGGSPFKRFLTSLLSLYSLLFPGRESLQSAKRLAKLKAIRLHIGVGGVCALGAPLCLLFLWV 277
            +L++F  ++ V++LGF MA   L RD D+    FG+  L LFK +LGD + F+VFS   G+ Y      LLVVYL ++T+MLLNLL+A+LST+HA+V  N ++E +V+  R+++HY+LVV  D++P PFNL+Q+I   +   +                TR  +K    C    + +G V FW+VL PV  I G+LLW+ S      +PA     +       RD+  G S     L SL   Y ++ P                          C  GAP+ LL LW+
Sbjct:  887 ILLKFGFVMAVIVLGFTMAFHVLFRDFDS----FGESFLDLFKAMLGDTDFFKVFS---GDTYDVVATFLLVVYLFIVTVMLLNLLVAILSTSHAQVAENIEREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLIVWPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGS--KAIGPVVFWVVLGPVAVIGGSLLWMGS-----VLPAMYFWRKHHRLQNKRDNGGGDSKRSMHLWSLFLRYVVIIPCW------------------------CVFGAPVYLLLLWL 1137          
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: A0A6H5JG42_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG42_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 1.180e-30
Identity = 85/200 (42.50%), Postives = 122/200 (61.00%), Query Frame = 0
Query:    4 VLVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIFMKLLPFV------------LTRQPAKRDTICREIG-QTVGQVSFWLVLSPVVFIVGTLLWIASS 190
            VL++F  ++ VV++GF MA   L RD D+    FG+  L LFK + G+   F  FS   G+ Y     +LLVVYL ++TI+LLNLL+A+LST+H+KV+ N D+E + +  R+++HY+LVV  DI+PAPFNL+Q++   +   V             TRQ   R     E G + +G V FW+VL PV  + GTLLWI S+
Sbjct:  695 VLLKFGFVMAVVMIGFTMAFHVLFRDFDS----FGESFLELFKAMFGETTFFNAFS---GDTYDAVATMLLVVYLSIVTILLLNLLVAILSTSHSKVQKNIDREFKASIARMMDHYQLVVTNDILPAPFNLLQLVVWPIAWCVGGCCGRSTSGSQSTRQELNRGREAYERGNKAIGPVVFWVVLGPVAVVGGTLLWIVST 887          
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: A0A6H5JUV2_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV2_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 1.910e-28
Identity = 97/289 (33.56%), Postives = 146/289 (50.52%), Query Frame = 0
Query:    4 VLVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIFMKLLPFV---------------LTRQPAKRDTICREIGQTVGQVSFWLVLSPVVFIVGTLLWIASSVYTLFVPAAELVNRVPSASTLRDSLSGGSPFKRFLTSLLSLYSLLFPGRESLQSAKRLAKLKAIRLHIGVGGVCALGAPLCLLFLWV 277
            +L++F  ++ V++LGF MA     RD D+    FG+  L LFK +LGD + F+VFS   G+ Y F    LLVV L ++T+MLLNLL+A+LST+HA+V  N D+E +V+  R+++HY+LVV  D++P PFNL+Q++   +   +                TR  +K    C    + +  V FW+VL PV    G+LLW+ S      +PA     +       R++  G S     L SL   Y+++ P                          C  GAP+ LL LW+
Sbjct:  161 ILLKFGFVMAVILLGFIMAFHVQFRDFDS----FGESFLDLFKAMLGDNDFFKVFS---GDTYDFVATFLLVVGLFIVTVMLLNLLVAILSTSHAQVAENIDREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLVVWPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGS--KAIEPVVFWVVLGPVAVNGGSLLWMES-----VLPAMYFWRKHHRLQNKRENGGGDSKKSMHLWSLFLRYNVIIPCW------------------------CVFGAPVYLLLLWL 411          
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 2.290e-25
Identity = 82/211 (38.86%), Postives = 117/211 (55.45%), Query Frame = 0
Query:    5 LVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQII-----------FMKLLPFVLTRQPAKRDTIC------------------REIGQTVGQVSFWLVLSPVVFIVGTLLW 186
            L++F  ++LVV++GF MAL  + RD ++    FGD +L LFK +LG+   F+ FS   G RY     +L+VVYL ++T+MLLNLLIA+LST HA+V+ N     +V+K RI+ HYR VV  D++PAPFNLVQ++           +  LL     +   +R  I                   R   +  GQ+ +WLVL PV    G +LW
Sbjct:  875 LLQFGAVMLVVMIGFTMALHVIFRDVED----FGDTLLGLFKAMLGETGFFDEFS---GGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLLSLGVIAMTFPYCFLLEAKREQSETERPAIDEHGRLFWGNVWEGARQRHRGARRAFGQLVWWLVLGPVAVAGGAILW 1078          
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: D7FR83_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR83_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 5.270e-25
Identity = 84/191 (43.98%), Postives = 114/191 (59.69%), Query Frame = 0
Query:    7 RFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIFMKLLPFVLTRQPAKRDT--ICREIGQTVGQVSFWLVLSPVVFIVGTLLWIASSVYTLF 195
            +F +++ VVILGFAM+ F+L RD    T      +L  F+ +LG+V  F+   D  G ++     +LLV YLVVMTIMLLNLLIAVLSTAH KVE      + V++ R+  HYR VVA D +PAPFNL Q++   LLP  +     K +T  I R     VG++ FWL+L P   + G  +W+ S+   LF
Sbjct:  700 QFFVVMGVVILGFAMSFFALFRDVKGETIR--GALLDAFQAMLGEVGLFD---DFVGEKHDLAATVLLVSYLVVMTIMLLNLLIAVLSTAHGKVEEAVL--IRVSRARVYTHYRWVVATDALPAPFNLAQLVV--LLPCKMVDVLFKGNTYPIARR---GVGRIVFWLLLGPGAILGGVFVWLVSTPKALF 878          
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 5.410e-25
Identity = 84/191 (43.98%), Postives = 114/191 (59.69%), Query Frame = 0
Query:    7 RFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIFMKLLPFVLTRQPAKRDT--ICREIGQTVGQVSFWLVLSPVVFIVGTLLWIASSVYTLF 195
            +F +++ VVILGFAM+ F+L RD    T      +L  F+ +LG+V  F+   D  G ++     +LLV YL+VMTIMLLNLLIAVLSTAH KVE      + V++ R+  HYR VVA D +PAPFNL Q++   LLP  +     K +T  I R     VG++ FWLVL P   + G  +W+ S+   LF
Sbjct:  791 QFFVVMGVVILGFAMSFFALFRDVKGETLR--GALLDAFQAMLGEVGLFD---DFVGEKHDLAATVLLVSYLLVMTIMLLNLLIAVLSTAHGKVEEAVL--IRVSRARVYTHYRWVVATDALPAPFNLAQLVV--LLPCQMVDLLFKSNTYPIARR---GVGRIVFWLVLGPGAILGGIFVWLVSTPKALF 969          
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: A0A6H5KBU4_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU4_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.070e-24
Identity = 107/330 (32.42%), Postives = 160/330 (48.48%), Query Frame = 0
Query:    5 LVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIF-----MKLLPFVL----------TRQPAKRDT--------------ICREIGQTVGQVSFWLVLSPVVFIVGTLLWIASSVYTLFVPAAELVNRVPSASTLRDSLSGGS--PFKRFLTSLLSLY-SLLFPGRESLQSAKRLAKLKAIRLHIGVGG-------VCALGAPLCLLFLWVREPCLQVFQFIARLT-CR 294
            L++F  ++LVV++GF MAL    RD  +    FGD +L LFK +LG+   F+ FS   G RY     +L+VVYL ++T+MLLNLLIA+LST HA+V  N  +  +V+K RI+ HYR VV  D++PAPFNLVQ+I      +  LP+            T +PA  +                 R   +  GQ  +WLVL  V    G +LW  S ++         ++     ++    L  G   P +      + ++ S   P    LQ  + +   +++   IGV         +C LGAP CL+  W+  P  + F +  +L  CR
Sbjct:  892 LLQFGAVMLVVMIGFTMALHVFFRDVAD----FGDTLLGLFKAMLGETGIFDEFS---GGRYDPVATILVVVYLCIVTVMLLNLLIAILSTEHAQVMENTAEAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLILSLGVIVLTLPYYFLLEAKREHSETERPATDEDGRLFWGNVWEGARHRHRSARRAFGQFVWWLVLGSVAVAGGAMLWSLSGLFYAQYACHSWLSTTDEQNSFFGFLQEGDEEPDEEDTAKDVVVFGSCGSPLWRMLQGVRIV--FRSVLQWIGVVLAWFLIFLLCILGAPCCLVLRWLILPGTEFFSWCWKLAACR 1212          
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 8.190e-22
Identity = 78/224 (34.82%), Postives = 125/224 (55.80%), Query Frame = 0
Query:    5 LVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIFMKLLPFVL-------TRQPA-----------------------------KRDTICREIGQTV-GQVSFWLVLSPVVFIVGTLLWIASSV 191
            L +F +I+L+V+LGF  + +SL ++    T  +G++   +F+  LG+ +  + FS   G  +     +LLVVYLV++TIM+LNLL+AVLSTAHAKV+ NA  E +V + R+++HY  VV +D +P PFNL Q IF   LPF++       +R+P+                             KRD    ++ +   G+++FW +L P+  + G +LW+ S V
Sbjct: 1255 LAKFGMIMLLVMLGFVTSFYSLYKE----TTAYGEVWKAIFRATLGETDYLDDFS---GTTFDGVATVLLVVYLVLLTIMMLNLLVAVLSTAHAKVDANAGLEYKVTRARLIQHYVNVVEIDRLPPPFNLFQWIFA--LPFMVLDLCFRTSRRPSTASTNSAXXXXXXXXXXXXXXSINGNEKTKRDRSYFKVARGFFGRLAFWAMLGPIAVLAGWVLWMISIV 1469          
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: A0A6H5JCX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX0_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 1.440e-21
Identity = 71/192 (36.98%), Postives = 107/192 (55.73%), Query Frame = 0
Query:    5 LVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIFMKLLPFVLTRQPAKRDTICREIGQTVGQVSFWLVLSPVVFIVGTLLWIASSVYTLFV 196
            LVRF +++LVV++GFAM+L  L+RD+ +    FG+  + LFK  LGDV+ F   S                         +LNLL+A+L+ +H+KV+ N  +E +V+K R+++  R  V  D +PAPFN+ Q++F      V+   P+ R     E  Q +GQ   W VL  + F+ G++LWI S VY LFV
Sbjct:  324 LVRFGIVMLVVMVGFAMSLHVLIRDSKS----FGETFVALFKATLGDVDYFTASS-------------------------VLNLLVAILTVSHSKVQENVQREFKVSKARMIQRCRWTVENDWLPAPFNVAQLLFSGQYALVM---PSFRRKRYDEAKQAIGQAVSWFVLGLMAFVGGSILWILSVVYALFV 483          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLB1_ECTSI4.940e-3844.80Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5KJG3_9PHAE1.090e-3134.95Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JG42_9PHAE1.180e-3042.50Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JUV2_9PHAE1.910e-2833.56Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
D7FZR6_ECTSI2.290e-2538.86Ankyrin Repeat Transient Receptor Potential Channe... [more]
D7FR83_ECTSI5.270e-2543.98Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A6H5JMG8_9PHAE5.410e-2543.98Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KBU4_9PHAE1.070e-2432.42Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5LDE6_9PHAE8.190e-2234.82Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JCX0_9PHAE1.440e-2136.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 4..101
e-value: 8.8E-8
score: 31.7
NoneNo IPR availableGENE3D1.10.287.70coord: 3..121
e-value: 2.0E-6
score: 29.3
IPR002153Transient receptor potential channel, canonicalPANTHERPTHR10117TRANSIENT RECEPTOR POTENTIAL CHANNELcoord: 1..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8356contigA-nodosum_M_contig8356:14853..15836 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8356.1.1mRNA_A-nodosum_M_contig8356.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8356 14853..15850 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8356.1.1 ID=prot_A-nodosum_M_contig8356.1.1|Name=mRNA_A-nodosum_M_contig8356.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=328bp
MAMVLVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLG
DVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKV
EMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIFMKLLPFVLTRQ
PAKRDTICREIGQTVGQVSFWLVLSPVVFIVGTLLWIASSVYTLFVPAAE
LVNRVPSASTLRDSLSGGSPFKRFLTSLLSLYSLLFPGRESLQSAKRLAK
LKAIRLHIGVGGVCALGAPLCLLFLWVREPCLQVFQFIARLTCRRRESRR
IHSSNENSVEAHEQSTSMLDAKVHSILE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom
IPR002153TRPC_channel