mRNA_A-nodosum_M_contig8356.1.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig8356.1.1
Unique NamemRNA_A-nodosum_M_contig8356.1.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 8.840e-39
Identity = 102/229 (44.54%), Postives = 144/229 (62.88%), Query Frame = 3
Query:    3 VIFGMAMVLVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIFMKLLPFVLTRQPAKRDTICREIGQTVGQVSFWLVLSPVVFIVGTLLWIASSVYTLFVPAAELVNRVPSASTLRDSLSGGSPFKRFL 689
            V+F M   LV+F ++++VV+LGFAM+  +L  D D     FG   L LFK +LG+V+ F  F    GN+Y      L V+YLVV+ +MLLNLLIAVLST+H+KVE  AD+E +V+K RI+EHYR+VV + ++P PFNLVQ+I    LP V+ R  + + T      + VG+++FWL L PV    GT+LW+ SS++  FV      ++   A   R +LS GS   R+L
Sbjct:  929 VVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDT----FGGTCLTLFKAMLGEVDFFGSFP---GNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQLILS--LP-VMVRDRSGQGTASTRAQEAVGRMAFWLALGPVAAACGTVLWVLSSLFAPFVWHTHFYSK---AQARRGALSVGSLLVRYL 1144          
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: A0A6H5KJG3_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJG3_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 1.060e-32
Identity = 104/296 (35.14%), Postives = 152/296 (51.35%), Query Frame = 3
Query:    3 VIFGMAMVLVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIFMKLLPFV---------------LTRQPAKRDTICREIGQTVGQVSFWLVLSPVVFIVGTLLWIASSVYTLFVPAAELVNRVPSASTLRDSLSGGSPFKRFLTSLLSLYSLLFPGRESLQSAKRLAKLKAIRLHIGVGGVCALGAPLCLLFLWV 845
            V+F M  +L++F  ++ V++LGF MA   L RD D+    FG+  L LFK +LGD + F+VFS   G+ Y      LLVVYL ++T+MLLNLL+A+LST+HA+V  N ++E +V+  R+++HY+LVV  D++P PFNL+Q+I   +   +                TR  +K    C    + +G V FW+VL PV  I G+LLW+ S      +PA     +       RD+  G S     L SL   Y ++ P                          C  GAP+ LL LW+
Sbjct:  880 VVFRMTRILLKFGFVMAVIVLGFTMAFHVLFRDFDS----FGESFLDLFKAMLGDTDFFKVFS---GDTYDVVATFLLVVYLFIVTVMLLNLLVAILSTSHAQVAENIEREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLIVWPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGS--KAIGPVVFWVVLGPVAVIGGSLLWMGS-----VLPAMYFWRKHHRLQNKRDNGGGDSKRSMHLWSLFLRYVVIIPCW------------------------CVFGAPVYLLLLWL 1137          
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: A0A6H5JG42_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG42_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 8.450e-32
Identity = 89/207 (43.00%), Postives = 126/207 (60.87%), Query Frame = 3
Query:    3 VIFGMAMVLVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIFMKLLPFV------------LTRQPAKRDTICREIG-QTVGQVSFWLVLSPVVFIVGTLLWIASS 584
            VIF M  VL++F  ++ VV++GF MA   L RD D+    FG+  L LFK + G+   F  FS   G+ Y     +LLVVYL ++TI+LLNLL+A+LST+H+KV+ N D+E + +  R+++HY+LVV  DI+PAPFNL+Q++   +   V             TRQ   R     E G + +G V FW+VL PV  + GTLLWI S+
Sbjct:  688 VIFRMTTVLLKFGFVMAVVMIGFTMAFHVLFRDFDS----FGESFLELFKAMFGETTFFNAFS---GDTYDAVATMLLVVYLSIVTILLLNLLVAILSTSHSKVQKNIDREFKASIARMMDHYQLVVTNDILPAPFNLLQLVVWPIAWCVGGCCGRSTSGSQSTRQELNRGREAYERGNKAIGPVVFWVVLGPVAVVGGTLLWIVST 887          
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: A0A6H5JUV2_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV2_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 1.670e-29
Identity = 100/296 (33.78%), Postives = 150/296 (50.68%), Query Frame = 3
Query:    3 VIFGMAMVLVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIFMKLLPFV---------------LTRQPAKRDTICREIGQTVGQVSFWLVLSPVVFIVGTLLWIASSVYTLFVPAAELVNRVPSASTLRDSLSGGSPFKRFLTSLLSLYSLLFPGRESLQSAKRLAKLKAIRLHIGVGGVCALGAPLCLLFLWV 845
            V+F M  +L++F  ++ V++LGF MA     RD D+    FG+  L LFK +LGD + F+VFS   G+ Y F    LLVV L ++T+MLLNLL+A+LST+HA+V  N D+E +V+  R+++HY+LVV  D++P PFNL+Q++   +   +                TR  +K    C    + +  V FW+VL PV    G+LLW+ S      +PA     +       R++  G S     L SL   Y+++ P                          C  GAP+ LL LW+
Sbjct:  154 VVFRMTRILLKFGFVMAVILLGFIMAFHVQFRDFDS----FGESFLDLFKAMLGDNDFFKVFS---GDTYDFVATFLLVVGLFIVTVMLLNLLVAILSTSHAQVAENIDREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLVVWPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGS--KAIEPVVFWVVLGPVAVNGGSLLWMES-----VLPAMYFWRKHHRLQNKRENGGGDSKKSMHLWSLFLRYNVIIPCW------------------------CVFGAPVYLLLLWL 411          
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: D7FR83_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR83_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 2.820e-26
Identity = 89/201 (44.28%), Postives = 121/201 (60.20%), Query Frame = 3
Query:    3 VIFGMAMVLVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIFMKLLPFVLTRQPAKRDT--ICREIGQTVGQVSFWLVLSPVVFIVGTLLWIASSVYTLF 599
            V++GMA  L +F +++ VVILGFAM+ F+L RD    T      +L  F+ +LG+V  F+   D  G ++     +LLV YLVVMTIMLLNLLIAVLSTAH KVE      + V++ R+  HYR VVA D +PAPFNL Q++   LLP  +     K +T  I R     VG++ FWL+L P   + G  +W+ S+   LF
Sbjct:  690 VLYGMASELGQFFVVMGVVILGFAMSFFALFRDVKGETIR--GALLDAFQAMLGEVGLFD---DFVGEKHDLAATVLLVSYLVVMTIMLLNLLIAVLSTAHGKVEEAVL--IRVSRARVYTHYRWVVATDALPAPFNLAQLVV--LLPCKMVDVLFKGNTYPIARR---GVGRIVFWLLLGPGAILGGVFVWLVSTPKALF 878          
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 3.030e-26
Identity = 86/219 (39.27%), Postives = 121/219 (55.25%), Query Frame = 3
Query:    3 VIFGMAMVLVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQII-----------FMKLLPFVLTRQPAKRDTIC------------------REIGQTVGQVSFWLVLSPVVFIVGTLLW 572
            VIF M   L++F  ++LVV++GF MAL  + RD ++    FGD +L LFK +LG+   F+ FS   G RY     +L+VVYL ++T+MLLNLLIA+LST HA+V+ N     +V+K RI+ HYR VV  D++PAPFNLVQ++           +  LL     +   +R  I                   R   +  GQ+ +WLVL PV    G +LW
Sbjct:  867 VIFRMTATLLQFGAVMLVVMIGFTMALHVIFRDVED----FGDTLLGLFKAMLGETGFFDEFS---GGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLLSLGVIAMTFPYCFLLEAKREQSETERPAIDEHGRLFWGNVWEGARQRHRGARRAFGQLVWWLVLGPVAVAGGAILW 1078          
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: A0A6H5KBU4_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU4_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 1.420e-25
Identity = 111/338 (32.84%), Postives = 164/338 (48.52%), Query Frame = 3
Query:    3 VIFGMAMVLVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIF-----MKLLPFVL----------TRQPAKRDT--------------ICREIGQTVGQVSFWLVLSPVVFIVGTLLWIASSVYTLFVPAAELVNRVPSASTLRDSLSGGS--PFKRFLTSLLSLY-SLLFPGRESLQSAKRLAKLKAIRLHIGVGG-------VCALGAPLCLLFLWVREPCLQVFQFIARLT-CR 896
            VIF M   L++F  ++LVV++GF MAL    RD  +    FGD +L LFK +LG+   F+ FS   G RY     +L+VVYL ++T+MLLNLLIA+LST HA+V  N  +  +V+K RI+ HYR VV  D++PAPFNLVQ+I      +  LP+            T +PA  +                 R   +  GQ  +WLVL  V    G +LW  S ++         ++     ++    L  G   P +      + ++ S   P    LQ  + +   +++   IGV         +C LGAP CL+  W+  P  + F +  +L  CR
Sbjct:  884 VIFRMTATLLQFGAVMLVVMIGFTMALHVFFRDVAD----FGDTLLGLFKAMLGETGIFDEFS---GGRYDPVATILVVVYLCIVTVMLLNLLIAILSTEHAQVMENTAEAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLILSLGVIVLTLPYYFLLEAKREHSETERPATDEDGRLFWGNVWEGARHRHRSARRAFGQFVWWLVLGSVAVAGGAMLWSLSGLFYAQYACHSWLSTTDEQNSFFGFLQEGDEEPDEEDTAKDVVVFGSCGSPLWRMLQGVRIV--FRSVLQWIGVVLAWFLIFLLCILGAPCCLVLRWLILPGTEFFSWCWKLAACR 1212          
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 1.770e-25
Identity = 88/201 (43.78%), Postives = 120/201 (59.70%), Query Frame = 3
Query:    3 VIFGMAMVLVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIFMKLLPFVLTRQPAKRDT--ICREIGQTVGQVSFWLVLSPVVFIVGTLLWIASSVYTLF 599
            V++ MA  L +F +++ VVILGFAM+ F+L RD    T      +L  F+ +LG+V  F+   D  G ++     +LLV YL+VMTIMLLNLLIAVLSTAH KVE      + V++ R+  HYR VVA D +PAPFNL Q++   LLP  +     K +T  I R     VG++ FWLVL P   + G  +W+ S+   LF
Sbjct:  781 VLYSMASELGQFFVVMGVVILGFAMSFFALFRDVKGETLR--GALLDAFQAMLGEVGLFD---DFVGEKHDLAATVLLVSYLLVMTIMLLNLLIAVLSTAHGKVEEAVL--IRVSRARVYTHYRWVVATDALPAPFNLAQLVV--LLPCQMVDLLFKSNTYPIARR---GVGRIVFWLVLGPGAILGGIFVWLVSTPKALF 969          
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: A0A6H5JCX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX0_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 1.890e-22
Identity = 75/200 (37.50%), Postives = 111/200 (55.50%), Query Frame = 3
Query:    3 VIFGMAMVLVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIFMKLLPFVLTRQPAKRDTICREIGQTVGQVSFWLVLSPVVFIVGTLLWIASSVYTLFV 602
            VIF M   LVRF +++LVV++GFAM+L  L+RD+ +    FG+  + LFK  LGDV+ F   S                         +LNLL+A+L+ +H+KV+ N  +E +V+K R+++  R  V  D +PAPFN+ Q++F      V+   P+ R     E  Q +GQ   W VL  + F+ G++LWI S VY LFV
Sbjct:  316 VIFAMTAQLVRFGIVMLVVMVGFAMSLHVLIRDSKS----FGETFVALFKATLGDVDYFTASS-------------------------VLNLLVAILTVSHSKVQENVQREFKVSKARMIQRCRWTVENDWLPAPFNVAQLLFSGQYALVM---PSFRRKRYDEAKQAIGQAVSWFVLGLMAFVGGSILWILSVVYALFV 483          
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.990e-22
Identity = 81/232 (34.91%), Postives = 130/232 (56.03%), Query Frame = 3
Query:    3 VIFGMAMVLVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLGDVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKVEMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIFMKLLPFVL-------TRQPA-----------------------------KRDTICREIGQTV-GQVSFWLVLSPVVFIVGTLLWIASSV 587
            V+F M  +L +F +I+L+V+LGF  + +SL ++    T  +G++   +F+  LG+ +  + FS   G  +     +LLVVYLV++TIM+LNLL+AVLSTAHAKV+ NA  E +V + R+++HY  VV +D +P PFNL Q IF   LPF++       +R+P+                             KRD    ++ +   G+++FW +L P+  + G +LW+ S V
Sbjct: 1247 VMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKE----TTAYGEVWKAIFRATLGETDYLDDFS---GTTFDGVATVLLVVYLVLLTIMMLNLLVAVLSTAHAKVDANAGLEYKVTRARLIQHYVNVVEIDRLPPPFNLFQWIFA--LPFMVLDLCFRTSRRPSTASTNSAXXXXXXXXXXXXXXSINGNEKTKRDRSYFKVARGFFGRLAFWAMLGPIAVLAGWVLWMISIV 1469          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8356.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLB1_ECTSI8.840e-3944.54Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5KJG3_9PHAE1.060e-3235.14Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JG42_9PHAE8.450e-3243.00Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JUV2_9PHAE1.670e-2933.78Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
D7FR83_ECTSI2.820e-2644.28Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
D7FZR6_ECTSI3.030e-2639.27Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5KBU4_9PHAE1.420e-2532.84Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JMG8_9PHAE1.770e-2543.78Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JCX0_9PHAE1.890e-2237.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LDE6_9PHAE1.990e-2234.91Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8356contigA-nodosum_M_contig8356:14853..15850 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FLB1
PFAMsIon_trans
Model size1000
Max annot lvl2759|Eukaryota
KEGG koko:K04981
KEGG TC1.A.4.5.8
KEGG Pathwayko04978,map04978
Hectar predicted targeting categorysignal peptide
Exons1
Evalue8.09e-39
EggNOG OGsKOG3614@1|root,KOG3614@2759|Eukaryota
EC2.7.11.1
Descriptionion channel activity
Cds size984
COG categoryS
BRITEko00000,ko00001,ko01000,ko01001,ko04040
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870186.4194655-CDS-A-nodosum_M_contig8356:14852..158361680870186.4194655-CDS-A-nodosum_M_contig8356:14852..15836Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8356 14853..15836 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870186.4351377-UTR-A-nodosum_M_contig8356:15836..158501680870186.4351377-UTR-A-nodosum_M_contig8356:15836..15850Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig8356 15837..15850 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8356.1.1prot_A-nodosum_M_contig8356.1.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig8356 14853..15836 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig8356.1.1

>prot_A-nodosum_M_contig8356.1.1 ID=prot_A-nodosum_M_contig8356.1.1|Name=mRNA_A-nodosum_M_contig8356.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=328bp
MAMVLVRFALILLVVILGFAMALFSLLRDADNSTFNFGDIMLLLFKTLLG
DVEAFEVFSDEAGNRYSFTGNLLLVVYLVVMTIMLLNLLIAVLSTAHAKV
EMNADKELEVAKVRIVEHYRLVVALDIIPAPFNLVQIIFMKLLPFVLTRQ
PAKRDTICREIGQTVGQVSFWLVLSPVVFIVGTLLWIASSVYTLFVPAAE
LVNRVPSASTLRDSLSGGSPFKRFLTSLLSLYSLLFPGRESLQSAKRLAK
LKAIRLHIGVGGVCALGAPLCLLFLWVREPCLQVFQFIARLTCRRRESRR
IHSSNENSVEAHEQSTSMLDAKVHSILE
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mRNA from alignment at A-nodosum_M_contig8356:14853..15850-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig8356.1.1 ID=mRNA_A-nodosum_M_contig8356.1.1|Name=mRNA_A-nodosum_M_contig8356.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=998bp|location=Sequence derived from alignment at A-nodosum_M_contig8356:14853..15850- (Ascophyllum nodosum dioecious)
AGGTGATATTCGGCATGGCTATGGTGCTCGTACGGTTCGCATTGATCCTC CTTGTGGTCATACTGGGATTCGCGATGGCGCTTTTCTCGCTCTTGCGGGA TGCCGACAACTCCACCTTCAACTTCGGAGACATAATGCTTCTCCTTTTCA AAACCCTATTGGGCGACGTGGAAGCCTTCGAAGTGTTTAGCGATGAAGCA GGAAACCGCTATTCATTCACCGGCAATCTGTTGCTGGTCGTGTACCTCGT GGTTATGACAATCATGTTGCTTAACCTTCTCATCGCGGTTCTAAGTACGG CGCACGCCAAGGTCGAGATGAATGCTGACAAGGAGTTAGAGGTCGCCAAA GTTAGGATAGTTGAGCATTACCGGCTGGTCGTGGCGTTAGACATCATTCC CGCGCCTTTTAATTTGGTGCAAATCATCTTTATGAAACTACTACCGTTCG TCTTGACGCGCCAACCAGCAAAGCGAGATACAATATGCCGTGAAATCGGG CAAACAGTTGGGCAAGTCTCTTTCTGGCTAGTTCTGAGCCCGGTAGTATT CATCGTGGGAACTCTCTTATGGATTGCCTCTAGTGTATACACTCTCTTTG TCCCTGCCGCGGAATTGGTTAATCGTGTCCCATCCGCGTCAACCCTAAGA GATTCACTTAGTGGAGGGTCTCCCTTCAAGAGGTTCTTAACGAGTCTCTT GAGTCTGTACAGTCTTCTTTTCCCAGGAAGGGAGTCGTTACAATCTGCAA AACGCCTTGCAAAGTTGAAGGCGATACGCCTACACATTGGGGTGGGAGGG GTTTGTGCTCTGGGTGCCCCTCTCTGCCTCTTGTTTTTGTGGGTAAGGGA ACCCTGCTTGCAGGTCTTTCAGTTCATCGCCCGTTTGACATGTCGTCGAA GAGAGTCGAGACGAATACACTCTTCAAACGAAAATAGTGTAGAAGCTCAC GAACAAAGTACAAGTATGTTGGACGCTAAAGTACACAGTATATTAGAA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig8356:14853..15850-

>mRNA_A-nodosum_M_contig8356.1.1 ID=mRNA_A-nodosum_M_contig8356.1.1|Name=mRNA_A-nodosum_M_contig8356.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=984bp|location=Sequence derived from alignment at A-nodosum_M_contig8356:14853..15850- (Ascophyllum nodosum dioecious)
ATGGCTATGGTGCTCGTACGGTTCGCATTGATCCTCCTTGTGGTCATACT
GGGATTCGCGATGGCGCTTTTCTCGCTCTTGCGGGATGCCGACAACTCCA
CCTTCAACTTCGGAGACATAATGCTTCTCCTTTTCAAAACCCTATTGGGC
GACGTGGAAGCCTTCGAAGTGTTTAGCGATGAAGCAGGAAACCGCTATTC
ATTCACCGGCAATCTGTTGCTGGTCGTGTACCTCGTGGTTATGACAATCA
TGTTGCTTAACCTTCTCATCGCGGTTCTAAGTACGGCGCACGCCAAGGTC
GAGATGAATGCTGACAAGGAGTTAGAGGTCGCCAAAGTTAGGATAGTTGA
GCATTACCGGCTGGTCGTGGCGTTAGACATCATTCCCGCGCCTTTTAATT
TGGTGCAAATCATCTTTATGAAACTACTACCGTTCGTCTTGACGCGCCAA
CCAGCAAAGCGAGATACAATATGCCGTGAAATCGGGCAAACAGTTGGGCA
AGTCTCTTTCTGGCTAGTTCTGAGCCCGGTAGTATTCATCGTGGGAACTC
TCTTATGGATTGCCTCTAGTGTATACACTCTCTTTGTCCCTGCCGCGGAA
TTGGTTAATCGTGTCCCATCCGCGTCAACCCTAAGAGATTCACTTAGTGG
AGGGTCTCCCTTCAAGAGGTTCTTAACGAGTCTCTTGAGTCTGTACAGTC
TTCTTTTCCCAGGAAGGGAGTCGTTACAATCTGCAAAACGCCTTGCAAAG
TTGAAGGCGATACGCCTACACATTGGGGTGGGAGGGGTTTGTGCTCTGGG
TGCCCCTCTCTGCCTCTTGTTTTTGTGGGTAAGGGAACCCTGCTTGCAGG
TCTTTCAGTTCATCGCCCGTTTGACATGTCGTCGAAGAGAGTCGAGACGA
ATACACTCTTCAAACGAAAATAGTGTAGAAGCTCACGAACAAAGTACAAG
TATGTTGGACGCTAAAGTACACAGTATATTAGAA
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