prot_A-nodosum_M_contig835.15.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig835.15.1
Unique Nameprot_A-nodosum_M_contig835.15.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length407
Homology
BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: D7G8V6_ECTSI (Rad51 homolog C n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V6_ECTSI)

HSP 1 Score: 464 bits (1195), Expect = 8.980e-161
Identity = 244/298 (81.88%), Postives = 263/298 (88.26%), Query Frame = 0
Query:   74 GDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRKQGIMDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKLVVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRDAHAA 371
            G + A +  GV  G      AG+SAR+LIVRGRHKKPIITFCREID M+GGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGV G ALYIDTEGSLTVERLSQLCSAVVEHLQKIA++KRKQG+ DL+S VPTQEA LGGIHVWRLHDHAEQLAAVRTLP FL  HP+VKLVVMDSVAFHFRHAFQD+SVRTRMLS+MAQQLNEVAQ  SLAV+LVNQMTTKV +TG  RG  ESSLVPALGESWAHAATNRLLL W G++RFAELLKSPRLR KTVPF+VV VGIRD  ++
Sbjct:    2 GSAAAAVAGGVLRGGLAGSQAGASARELIVRGRHKKPIITFCREIDGMMGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVGGGALYIDTEGSLTVERLSQLCSAVVEHLQKIARNKRKQGVPDLESAVPTQEAFLGGIHVWRLHDHAEQLAAVRTLPEFLVAHPEVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQAHSLAVVLVNQMTTKV-MTGH-RG--ESSLVPALGESWAHAATNRLLLLWKGQERFAELLKSPRLRRKTVPFSVVGVGIRDTQSS 295          
BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: A0A835ZD48_9STRA (Rad51-like protein c n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD48_9STRA)

HSP 1 Score: 311 bits (797), Expect = 1.160e-99
Identity = 187/386 (48.45%), Postives = 242/386 (62.69%), Query Frame = 0
Query:    6 MAPAM------ARTEICSLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARELKTSPQEGQAILRDVAAATGSREGDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRKQGI------MDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKL------------VVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRD 367
            MAPA       +R ++ +L IAPS  ++L R GF+ + D+   +P +L+ E   +PQE    ++ V+AA G   G                     +SA DL+ + R  + I+ F R+ID M GGGVPRGELTE+ GTPG+GKTQFGMQLAVDVQIP  FGGV GEA+YIDTEGS T ER++Q+  A+V HL +++ + RK+            + + T+E LL  IHV+R+HDHAEQLAAVR LPAF+                    VV+DSVAFHFRHA  D+++R RML+ M QQLN++A+++SLAV+L NQMT +      GR G E  LV ALG++WAHAATNRL+LFW    RFA LLKS R    TVPF V RVGIRD
Sbjct:    1 MAPAANQHSFASRRQLGTLGIAPSLLEKLNRAGFKLVGDVLDSRPDELSTEAGMTPQEALECMQLVSAACGDAGGQXXXXXXXXX-------XXXXTSASDLLAQERATRGIVCFSRKIDDMFGGGVPRGELTEIMGTPGIGKTQFGMQLAVDVQIPVLFGGVGGEAVYIDTEGSFTPERVAQMADALVSHLARVSAAHRKKQTPAQAEQWAAAAALVTREYLLRRIHVFRVHDHAEQLAAVRALPAFVASRSGXXXXXXXXXXXXXXXVVLDSVAFHFRHACADMALRARMLATMGQQLNQLAREQSLAVVLTNQMTKRY---DSGRNGEEK-LVAALGDTWAHAATNRLMLFWKENQRFASLLKSSRREPATVPFIVDRVGIRD 375          
BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: A0A6P4XU31_BRABE (DNA repair protein RAD51 homolog 3-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4XU31_BRABE)

HSP 1 Score: 301 bits (771), Expect = 3.730e-96
Identity = 167/351 (47.58%), Postives = 225/351 (64.10%), Query Frame = 0
Query:   17 SLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARELKTSPQEGQAILRDVAAATGSREGDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRKQGIMDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKLVVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRD 367
            S  + P  + +LL GGF T+ DLE ++P +L++ELK SP+E   ILR V             G+++   + SS    A  +A DL+   RH+  IITFC  +D++LGGGVP  ++TE CG PGVGKTQ GMQLA+DVQIP  FGG+ GEA+Y+DTEGS  V RL  +  A VEH + IA  +  +  ++  S   T E +L  IH +R+HD  E +A +  LP FL++HP ++LVVMDS+AF FRH F+D+S+RTR+L+ +AQ    +A     AV+LVNQMTTK+  +G G    ++ LVPALGESW HA+T R+LLFW    R+A L KSP     TVP+ V   GIRD
Sbjct:    7 SYPLPPYLKTKLLAGGFSTVEDLEDLKPVELSKELKISPEEALEILRVVQ------------GVQNDASSPSSS-DEAVKTALDLLQEERHQGCIITFCSALDELLGGGVPLTKITEFCGAPGVGKTQMGMQLAIDVQIPCVFGGLGGEAVYVDTEGSFMVHRLEDMAKAAVEHCRHIATVENNREQLEAMSDF-TVEHILSRIHFYRVHDWVELVALINILPEFLQQHPKIRLVVMDSIAFPFRHDFEDLSLRTRLLNGLAQNCIRLADSHKAAVVLVNQMTTKMGHSGDG----QAHLVPALGESWGHASTIRVLLFWEAGYRYARLYKSPTREEATVPYQVTMAGIRD 339          
BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: A0A7S1SLP5_9CHLO (Hypothetical protein n=2 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SLP5_9CHLO)

HSP 1 Score: 299 bits (765), Expect = 3.720e-95
Identity = 163/359 (45.40%), Postives = 225/359 (62.67%), Query Frame = 0
Query:   15 ICSLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARELKTSPQEGQAILRDVAAATGSREGDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRKQGIMDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKLVVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRDAHAAAP 373
            I +L +AP+ R +L   GFR + DL G  P DLARE   + QE   +L+   +A    EG + A                  SA  +    +  + I+TFC ++D+MLGGG+P   +TE CG PGVGKTQ GMQ+AVD QIP   GG++GEA+YIDTEGS  +ERL  +  AVV+H+  + +    +          ++E++L GIH +R+HD AEQ+A   TLP F++ HP V  +++DS+ F FR  FQD++ RTR+L++MAQQL ++A+ + +AV+L+NQ+TTKVR    G GGS   LVPALG+SWAHAAT+R++LFW+   RFA L KSP     TVP+AV   GIRD   A P
Sbjct:    8 IATLELAPTVRHKLQATGFRNVGDLRGCGPIDLAREAGITHQEALFVLKVAFSADHGDEGIAGA-----------------ISAEQVYAEEQASRGIVTFCEKVDRMLGGGIPARAITEFCGVPGVGKTQLGMQIAVDAQIPECMGGLQGEAVYIDTEGSFMMERLLDITDAVVDHVHNLGRRATSEECKTQAERF-SRESVLHGIHYFRVHDAAEQIAVTNTLPQFMDNHPKVCAIIVDSITFQFRQGFQDMAQRTRLLAQMAQQLMQLAESKGIAVVLINQVTTKVRQERTGGGGSR--LVPALGDSWAHAATSRVILFWHEGQRFAHLHKSPSRPSTTVPYAVTAAGIRDVAPAPP 346          
BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: UPI001425896F (DNA repair protein RAD51 homolog 3-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425896F)

HSP 1 Score: 297 bits (761), Expect = 1.160e-94
Identity = 163/359 (45.40%), Postives = 226/359 (62.95%), Query Frame = 0
Query:   15 ICSLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARELKTSPQEGQAILRDVAAATGSREGDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRKQGIMDLDSVVP-TQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKLVVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRDAHAAA 372
            I SL + P  ++RL   GF    DL G++PS L+RE+  S +E   +L+ +   T +R       L+ G        + +  +A +++        +ITFC E+D MLGGG+P G+ TE+CG PGVGKTQ  +QLAVDVQIP +FGG+EGEA+YIDTEGS  VER S++  AVVEH   +A S+     + L S+   T++ +L GIH  R  D+ E +A + TLP FL  HP V+L+V+DSVAFHFRH  +++S+RTR+L+ +AQ L ++A + ++AV+L NQMTTK      GR    S L+PALGESW HAAT RL+L+W G  R A L KSP  +  TVP+ V   G+R   + A
Sbjct:    3 IGSLPLPPLIKNRLYEAGFVIFDDLNGLKPSQLSREIDCSLEEAHEVLKTLENVTEARFS-----LKHG--------KTSSKTALEILQEESKLPSVITFCEEMDNMLGGGIPLGKTTEICGAPGVGKTQICIQLAVDVQIPEEFGGLEGEAMYIDTEGSFMVERASEIAKAVVEHCGNVAASQNNN--VQLKSMEKFTEDGILAGIHYTRCQDYIELIAFINTLPKFLSNHPKVRLIVIDSVAFHFRHDIENLSLRTRLLNGLAQNLIKLAMENTVAVVLTNQMTTKF-----GREDGGSKLIPALGESWGHAATVRLILYWQGNQRLAMLYKSPSRQEMTVPYQVTNCGVRSIPSGA 341          
BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: A0A7S3UDT2_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UDT2_9CHLO)

HSP 1 Score: 290 bits (742), Expect = 4.320e-92
Identity = 163/361 (45.15%), Postives = 226/361 (62.60%), Query Frame = 0
Query:   12 RTEICSLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARELKTSPQEGQAILRDVAAATGSREGDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRKQGIMDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKLVVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRDAHAAA 372
            R ++ +L +A   R  L+  G+ TL DL G  P+ +AR+   S  E    L+          G ++AGLR  V         +G +A  +  + R ++ ++TFC  +D++LGGGV   E+TE CG PG+GKTQ GMQLAVDVQIP +FGG+ G+A+YIDTEGS   ER  ++  A +EHLQKIA S +   ++ L S     E +L  IH +R+HD  EQ+A V  LP FL  HP+V+LVV+DSVAFHFR  F+D++ RTR+L+ M Q L  VA    +AV+L NQ+TTKV       GG ++ LVPALG+S+AHA+TNR+LLFW+  +R A L KSP L  +TV +A+   G+R    +A
Sbjct:   13 RRDVTTLPLASHVRQSLVDAGYATLADLVGATPATVARQAGISQDEALEALQ--------HGGSTSAGLRSPV-------WRSGKTADVIFEQERRRRRVVTFCPALDELLGGGVAPCEITEFCGVPGIGKTQLGMQLAVDVQIPQEFGGLAGQAVYIDTEGSFMAERAEEIADACLEHLQKIATSAQDADLLRLVSKWDV-EKMLANIHFFRVHDSTEQIALVHVLPEFLCAHPEVRLVVLDSVAFHFRQEFRDMAKRTRLLASMMQGLMNVANDSQVAVVLTNQVTTKVH------GGGDARLVPALGDSFAHASTNRVLLFWHECERHAHLYKSPYLPGRTVAYALTSQGVRGVDKSA 351          
BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: UPI00155FC7CC (DNA repair protein RAD51 homolog 3-like n=3 Tax=Acipenseroidei TaxID=186622 RepID=UPI00155FC7CC)

HSP 1 Score: 288 bits (737), Expect = 3.790e-91
Identity = 158/364 (43.41%), Postives = 225/364 (61.81%), Query Frame = 0
Query:   10 MARTEICSLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARELKTSPQEGQAILRDVAAATGSREGDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRKQGIMDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKLVVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRDAHAAAP 373
            M + ++ S   AP+ + RL+  GF T +D+  ++P++L++E   S QE   +L++V      R G +  G  +   T           A +L+ R +    +ITFC  +DQ LGGG+P G+ TE+CG PGVGKTQ  +QLAVD QIP  FGG+ G+A+YIDTEGS  VER   + +A V+H   I K   ++  +   +V    E +L  + ++R HD+ E LA    LP FL +HP V+L+V+DS+AF FRH+F+D+S+RTR+L+ +AQQL ++A Q S+AV+L NQMTT++       G ++S LVPALGESW HAAT RL+L W G+ RFA L KSP  R  TVP+ +   G RD     P
Sbjct:    1 MMQRDVASFAFAPAVKVRLISAGFLTAKDIRDLRPTELSKEAGISQQEALEVLQEV------RRGPAEQGAAESRLT-----------ALELLEREQALGTVITFCSALDQALGGGIPVGKTTEICGAPGVGKTQLCIQLAVDAQIPGCFGGLGGQAVYIDTEGSFLVERALDVATAAVQHCTLITKDTEQREALQSFTV----ETVLSQLFLFRCHDYVELLAQTHLLPDFLSQHPKVRLMVIDSIAFPFRHSFEDLSLRTRLLNGLAQQLIQIASQHSVAVVLTNQMTTRI-------GQNQSMLVPALGESWGHAATQRLILHWEGKHRFASLYKSPSQREATVPYQITPHGFRDVQLPDP 336          
BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: H2ZS27_LATCH (RECA_2 domain-containing protein n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H2ZS27_LATCH)

HSP 1 Score: 288 bits (736), Expect = 5.890e-91
Identity = 162/363 (44.63%), Postives = 228/363 (62.81%), Query Frame = 0
Query:   14 EICSLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARELKTSPQEGQAILRDVAAATGSREGDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRK---QGIMDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKLVVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRDAHAAAP 373
            ++ S  +AP++R +L+  GF T+ DL+G++PS+L++E+  S +E   IL+ V   T   EG      R       S R+    +A +L+ + + +  IITFC  +D +LGGGVP  + TE+CG PGVGKTQ  +QLAVDVQIP  FGG++GEA+YIDTEGS  V+R   +  A VEH + I +S ++   Q  M+  SV    + +L  I+ +R HD+ E LA    LP FL  HP V++VV+DS+AF FRH F D+S+RTR+L+ +AQQL   A    +AV+L NQMTT++       G ++S LVPALGESW HAAT RL+L W G++R A L KSP  +  T+P+ +   G RD  A  P
Sbjct:    4 DLGSFPLAPAARSKLIGAGFETVEDLKGIKPSELSKEIGISKEEALEILQIVKGDTVEGEGRHAVASR-------SVRK---CTALELLEQEQAQNSIITFCSALDDILGGGVPVSKTTEICGAPGVGKTQLCLQLAVDVQIPECFGGLDGEAVYIDTEGSFIVDRAVDIAHAAVEHCKLITESHQENEQQKAMETFSV----DTILSHIYYFRCHDYVELLAQAHLLPDFLSAHPKVRVVVIDSIAFPFRHDFDDLSLRTRLLNGLAQQLISTANDYKVAVVLTNQMTTRI-------GQNQSMLVPALGESWGHAATIRLILHWEGKNRMASLYKSPSQKEATIPYQITFQGFRDIQAPVP 345          
BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: UPI00148A3B53 (DNA repair protein RAD51 homolog 3-like n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A3B53)

HSP 1 Score: 285 bits (728), Expect = 7.100e-90
Identity = 157/359 (43.73%), Postives = 225/359 (62.67%), Query Frame = 0
Query:   11 ARTEICSLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARELKTSPQEGQAILRDVAAAT--GSREGDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRKQGIMDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKLVVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRD 367
            ++ E+CS  IAPS + +L   GF    DL+ ++PS+L++E     +E   IL+ V + +  GS+  ++                    SA + +   +   PIITF   +D MLGGGVP  ++TE CG PGVGKTQ  MQ+AVDVQIP QFGG++GEA+YIDTEGS  VERL  +  A V+H  ++A   R +G  + +  V   E++L G+H +R HD+ E LA V  LP F+++HP +K+V++DSVAFHFRH F D+S+RTR+L+ MAQ   ++A +  +A++L NQMTTK         G +S LVPALGESW HA+T R++L+W G+ R+A L KSP  +   VP+ +   G+RD
Sbjct:    3 SQRELCSFPIAPSHKSKLTSAGFLITEDLKHLKPSELSKETGIGLEECLEILKLVCSESVDGSKRNEAP---------------KPAVSALERLKEEQSLPPIITFSEGLDNMLGGGVPLCKITEFCGAPGVGKTQMCMQIAVDVQIPSQFGGLQGEAVYIDTEGSFIVERLVDIAKATVDHCNEMA---RLEGFKEGEITV---ESVLSGVHFYRCHDYVELLATVHLLPEFIKKHPKIKVVLVDSVAFHFRHDFDDLSLRTRLLTTMAQSFIKLATEFKIAIVLTNQMTTKFS------PGEDSRLVPALGESWGHASTIRVILYWEGQKRWAWLYKSPSKKESRVPYQITMGGVRD 334          
BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: UPI0016036942 (DNA repair protein RAD51 homolog 3-like isoform X1 n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016036942)

HSP 1 Score: 284 bits (727), Expect = 1.410e-89
Identity = 160/353 (45.33%), Postives = 216/353 (61.19%), Query Frame = 0
Query:   15 ICSLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARELKTSPQEGQAILRDVAAATGSREGDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRKQGIMDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKLVVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRD 367
            I S  I P  +++L+  GF T  DLE V+P +L++ELK +P E   +LR V       +GD         G           +A D++   R +  IITFC  +D++LGGGVP  ++TE CG PGVGKTQ GMQLA+DVQIP  FGG+ GEA+YIDTEGS  V RL  +  A +EH + IA  +  +  ++  +   T E +L  IH +R+HD  E +A +  LP FL+ H  V+LVV+DS+AF FRH F+D+S+RTR+L+ +AQ    +A     AV+LVNQMTTK+   G G    ++ LVPALGESW HA+T R+LLFW    R+A L KSP     TVP+ V   G+RD
Sbjct:    5 IGSYPIPPYLKNKLITAGFSTAEDLEDVKPVELSKELKITPAEALEVLRVV-------QGDQKDPPSPDEGV---------KTALDMLQEEREQGGIITFCSALDELLGGGVPLTKITEFCGAPGVGKTQMGMQLAIDVQIPSAFGGLGGEAVYIDTEGSFMVHRLEDMAKAAMEHCRHIATVENNRDQLEAMADF-TVEHILSRIHFYRVHDWVELVALINILPEFLQEHSKVRLVVIDSIAFPFRHDFEDLSLRTRLLNGLAQNCIRLADSHKAAVVLVNQMTTKMGHAGDG----QAHLVPALGESWGHASTIRVLLFWEAGCRYARLYKSPTREEATVPYQVTVAGVRD 336          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8V6_ECTSI8.980e-16181.88Rad51 homolog C n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A835ZD48_9STRA1.160e-9948.45Rad51-like protein c n=1 Tax=Tribonema minus TaxID... [more]
A0A6P4XU31_BRABE3.730e-9647.58DNA repair protein RAD51 homolog 3-like n=3 Tax=Br... [more]
A0A7S1SLP5_9CHLO3.720e-9545.40Hypothetical protein n=2 Tax=Tetraselmis chuii Tax... [more]
UPI001425896F1.160e-9445.40DNA repair protein RAD51 homolog 3-like n=1 Tax=An... [more]
A0A7S3UDT2_9CHLO4.320e-9245.15Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
UPI00155FC7CC3.790e-9143.41DNA repair protein RAD51 homolog 3-like n=3 Tax=Ac... [more]
H2ZS27_LATCH5.890e-9144.63RECA_2 domain-containing protein n=1 Tax=Latimeria... [more]
UPI00148A3B537.100e-9043.73DNA repair protein RAD51 homolog 3-like n=1 Tax=Cr... [more]
UPI00160369421.410e-8945.33DNA repair protein RAD51 homolog 3-like isoform X1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016467DNA recombination and repair protein, RecA-likePIRSFPIRSF005856Rad51coord: 6..371
e-value: 1.4E-65
score: 218.8
IPR013632DNA recombination and repair protein Rad51-like, C-terminalPFAMPF08423Rad51coord: 109..367
e-value: 9.6E-44
score: 149.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 93..370
e-value: 8.5E-70
score: 237.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 110..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 382..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..406
NoneNo IPR availablePANTHERPTHR46239DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51Ccoord: 13..382
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 107..298
score: 41.049034
IPR033925Rad51/DMC1/RadACDDcd01123Rad51_DMC1_radAcoord: 111..366
e-value: 2.35094E-73
score: 227.081

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig835contigA-nodosum_M_contig835:178734..184996 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig835.15.1mRNA_A-nodosum_M_contig835.15.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig835 172415..186470 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig835.15.1 ID=prot_A-nodosum_M_contig835.15.1|Name=mRNA_A-nodosum_M_contig835.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=407bp
MNVPPMAPAMARTEICSLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARE
LKTSPQEGQAILRDVAAATGSREGDSTAGLRDGVGTGSSCRQNAGSSARD
LIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLA
VDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRK
QGIMDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKL
VVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTT
KVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPR
LRHKTVPFAVVRVGIRDAHAAAPGAAAAAKRSSSSERRDRGDREHVAKRH
TSGSLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016467DNA_recomb/repair_RecA-like
IPR013632DNA_recomb/repair_Rad51_C
IPR027417P-loop_NTPase
IPR020588RecA_ATP-bd
IPR033925Rad51_DMC1_RadA