mRNA_A-nodosum_M_contig835.15.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig835.15.1
Unique NamemRNA_A-nodosum_M_contig835.15.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
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BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: D7G8V6_ECTSI (Rad51 homolog C n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V6_ECTSI)

HSP 1 Score: 464 bits (1195), Expect = 6.710e-153
Identity = 244/298 (81.88%), Postives = 263/298 (88.26%), Query Frame = 1 
Query:  466 GDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRKQGIMDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKLVVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRDAHAA 1359
            G + A +  GV  G      AG+SAR+LIVRGRHKKPIITFCREID M+GGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGV G ALYIDTEGSLTVERLSQLCSAVVEHLQKIA++KRKQG+ DL+S VPTQEA LGGIHVWRLHDHAEQLAAVRTLP FL  HP+VKLVVMDSVAFHFRHAFQD+SVRTRMLS+MAQQLNEVAQ  SLAV+LVNQMTTKV +TG  RG  ESSLVPALGESWAHAATNRLLL W G++RFAELLKSPRLR KTVPF+VV VGIRD  ++
Sbjct:    2 GSAAAAVAGGVLRGGLAGSQAGASARELIVRGRHKKPIITFCREIDGMMGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVGGGALYIDTEGSLTVERLSQLCSAVVEHLQKIARNKRKQGVPDLESAVPTQEAFLGGIHVWRLHDHAEQLAAVRTLPEFLVAHPEVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQAHSLAVVLVNQMTTKV-MTGH-RG--ESSLVPALGESWAHAATNRLLLLWKGQERFAELLKSPRLRRKTVPFSVVGVGIRDTQSS 295
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BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: A0A835ZD48_9STRA (Rad51-like protein c n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD48_9STRA)

HSP 1 Score: 310 bits (795), Expect = 4.360e-93
Identity = 183/374 (48.93%), Postives = 237/374 (63.37%), Query Frame = 1 
Query:  280 RTEICSLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARELKTSPQEGQAILRDVAAATGSREGDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRKQGI------MDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKL------------VVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRD 1347
            R ++ +L IAPS  ++L R GF+ + D+   +P +L+ E   +PQE    ++ V+AA G   G                     +SA DL+ + R  + I+ F R+ID M GGGVPRGELTE+ GTPG+GKTQFGMQLAVDVQIP  FGGV GEA+YIDTEGS T ER++Q+  A+V HL +++ + RK+            + + T+E LL  IHV+R+HDHAEQLAAVR LPAF+                    VV+DSVAFHFRHA  D+++R RML+ M QQLN++A+++SLAV+L NQMT +      GR G E  LV ALG++WAHAATNRL+LFW    RFA LLKS R    TVPF V RVGIRD
Sbjct:   13 RRQLGTLGIAPSLLEKLNRAGFKLVGDVLDSRPDELSTEAGMTPQEALECMQLVSAACGDAGGQXXXXXXXXX-------XXXXTSASDLLAQERATRGIVCFSRKIDDMFGGGVPRGELTEIMGTPGIGKTQFGMQLAVDVQIPVLFGGVGGEAVYIDTEGSFTPERVAQMADALVSHLARVSAAHRKKQTPAQAEQWAAAAALVTREYLLRRIHVFRVHDHAEQLAAVRALPAFVASRSGXXXXXXXXXXXXXXXVVLDSVAFHFRHACADMALRARMLATMGQQLNQLAREQSLAVVLTNQMTKRY---DSGRNGEEK-LVAALGDTWAHAATNRLMLFWKENQRFASLLKSSRREPATVPFIVDRVGIRD 375
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BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: A0A6P4XU31_BRABE (DNA repair protein RAD51 homolog 3-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4XU31_BRABE)

HSP 1 Score: 301 bits (771), Expect = 4.980e-90
Identity = 167/351 (47.58%), Postives = 225/351 (64.10%), Query Frame = 1 
Query:  295 SLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARELKTSPQEGQAILRDVAAATGSREGDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRKQGIMDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKLVVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRD 1347
            S  + P  + +LL GGF T+ DLE ++P +L++ELK SP+E   ILR V             G+++   + SS    A  +A DL+   RH+  IITFC  +D++LGGGVP  ++TE CG PGVGKTQ GMQLA+DVQIP  FGG+ GEA+Y+DTEGS  V RL  +  A VEH + IA  +  +  ++  S   T E +L  IH +R+HD  E +A +  LP FL++HP ++LVVMDS+AF FRH F+D+S+RTR+L+ +AQ    +A     AV+LVNQMTTK+  +G G    ++ LVPALGESW HA+T R+LLFW    R+A L KSP     TVP+ V   GIRD
Sbjct:    7 SYPLPPYLKTKLLAGGFSTVEDLEDLKPVELSKELKISPEEALEILRVVQ------------GVQNDASSPSSS-DEAVKTALDLLQEERHQGCIITFCSALDELLGGGVPLTKITEFCGAPGVGKTQMGMQLAIDVQIPCVFGGLGGEAVYVDTEGSFMVHRLEDMAKAAVEHCRHIATVENNREQLEAMSDF-TVEHILSRIHFYRVHDWVELVALINILPEFLQQHPKIRLVVMDSIAFPFRHDFEDLSLRTRLLNGLAQNCIRLADSHKAAVVLVNQMTTKMGHSGDG----QAHLVPALGESWGHASTIRVLLFWEAGYRYARLYKSPTREEATVPYQVTMAGIRD 339
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BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: A0A7S1SLP5_9CHLO (Hypothetical protein n=2 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SLP5_9CHLO)

HSP 1 Score: 299 bits (765), Expect = 4.560e-89
Identity = 163/359 (45.40%), Postives = 225/359 (62.67%), Query Frame = 1 
Query:  289 ICSLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARELKTSPQEGQAILRDVAAATGSREGDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRKQGIMDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKLVVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRDAHAAAP 1365
            I +L +AP+ R +L   GFR + DL G  P DLARE   + QE   +L+   +A    EG + A                  SA  +    +  + I+TFC ++D+MLGGG+P   +TE CG PGVGKTQ GMQ+AVD QIP   GG++GEA+YIDTEGS  +ERL  +  AVV+H+  + +    +          ++E++L GIH +R+HD AEQ+A   TLP F++ HP V  +++DS+ F FR  FQD++ RTR+L++MAQQL ++A+ + +AV+L+NQ+TTKVR    G GGS   LVPALG+SWAHAAT+R++LFW+   RFA L KSP     TVP+AV   GIRD   A P
Sbjct:    8 IATLELAPTVRHKLQATGFRNVGDLRGCGPIDLAREAGITHQEALFVLKVAFSADHGDEGIAGA-----------------ISAEQVYAEEQASRGIVTFCEKVDRMLGGGIPARAITEFCGVPGVGKTQLGMQIAVDAQIPECMGGLQGEAVYIDTEGSFMMERLLDITDAVVDHVHNLGRRATSEECKTQAERF-SRESVLHGIHYFRVHDAAEQIAVTNTLPQFMDNHPKVCAIIVDSITFQFRQGFQDMAQRTRLLAQMAQQLMQLAESKGIAVVLINQVTTKVRQERTGGGGSR--LVPALGDSWAHAATSRVILFWHEGQRFAHLHKSPSRPSTTVPYAVTAAGIRDVAPAPP 346
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BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: UPI001425896F (DNA repair protein RAD51 homolog 3-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425896F)

HSP 1 Score: 297 bits (761), Expect = 1.340e-88
Identity = 163/359 (45.40%), Postives = 226/359 (62.95%), Query Frame = 1 
Query:  289 ICSLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARELKTSPQEGQAILRDVAAATGSREGDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRKQGIMDLDSVVP-TQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKLVVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRDAHAAA 1362
            I SL + P  ++RL   GF    DL G++PS L+RE+  S +E   +L+ +   T +R       L+ G        + +  +A +++        +ITFC E+D MLGGG+P G+ TE+CG PGVGKTQ  +QLAVDVQIP +FGG+EGEA+YIDTEGS  VER S++  AVVEH   +A S+     + L S+   T++ +L GIH  R  D+ E +A + TLP FL  HP V+L+V+DSVAFHFRH  +++S+RTR+L+ +AQ L ++A + ++AV+L NQMTTK      GR    S L+PALGESW HAAT RL+L+W G  R A L KSP  +  TVP+ V   G+R   + A
Sbjct:    3 IGSLPLPPLIKNRLYEAGFVIFDDLNGLKPSQLSREIDCSLEEAHEVLKTLENVTEARFS-----LKHG--------KTSSKTALEILQEESKLPSVITFCEEMDNMLGGGIPLGKTTEICGAPGVGKTQICIQLAVDVQIPEEFGGLEGEAMYIDTEGSFMVERASEIAKAVVEHCGNVAASQNNN--VQLKSMEKFTEDGILAGIHYTRCQDYIELIAFINTLPKFLSNHPKVRLIVIDSVAFHFRHDIENLSLRTRLLNGLAQNLIKLAMENTVAVVLTNQMTTKF-----GREDGGSKLIPALGESWGHAATVRLILYWQGNQRLAMLYKSPSRQEMTVPYQVTNCGVRSIPSGA 341
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BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: A0A7S3UDT2_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UDT2_9CHLO)

HSP 1 Score: 290 bits (742), Expect = 3.740e-86
Identity = 163/361 (45.15%), Postives = 226/361 (62.60%), Query Frame = 1 
Query:  280 RTEICSLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARELKTSPQEGQAILRDVAAATGSREGDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRKQGIMDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKLVVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRDAHAAA 1362
            R ++ +L +A   R  L+  G+ TL DL G  P+ +AR+   S  E    L+          G ++AGLR  V         +G +A  +  + R ++ ++TFC  +D++LGGGV   E+TE CG PG+GKTQ GMQLAVDVQIP +FGG+ G+A+YIDTEGS   ER  ++  A +EHLQKIA S +   ++ L S     E +L  IH +R+HD  EQ+A V  LP FL  HP+V+LVV+DSVAFHFR  F+D++ RTR+L+ M Q L  VA    +AV+L NQ+TTKV       GG ++ LVPALG+S+AHA+TNR+LLFW+  +R A L KSP L  +TV +A+   G+R    +A
Sbjct:   13 RRDVTTLPLASHVRQSLVDAGYATLADLVGATPATVARQAGISQDEALEALQ--------HGGSTSAGLRSPV-------WRSGKTADVIFEQERRRRRVVTFCPALDELLGGGVAPCEITEFCGVPGIGKTQLGMQLAVDVQIPQEFGGLAGQAVYIDTEGSFMAERAEEIADACLEHLQKIATSAQDADLLRLVSKWDV-EKMLANIHFFRVHDSTEQIALVHVLPEFLCAHPEVRLVVLDSVAFHFRQEFRDMAKRTRLLASMMQGLMNVANDSQVAVVLTNQVTTKVH------GGGDARLVPALGDSFAHASTNRVLLFWHECERHAHLYKSPYLPGRTVAYALTSQGVRGVDKSA 351
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BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: UPI00155FC7CC (DNA repair protein RAD51 homolog 3-like n=3 Tax=Acipenseroidei TaxID=186622 RepID=UPI00155FC7CC)

HSP 1 Score: 288 bits (736), Expect = 4.230e-85
Identity = 158/364 (43.41%), Postives = 225/364 (61.81%), Query Frame = 1 
Query:  274 MARTEICSLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARELKTSPQEGQAILRDVAAATGSREGDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRKQGIMDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKLVVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRDAHAAAP 1365
            M + ++ S   AP+ + RL+  GF T +D+  ++P++L++E   S QE   +L++V      R G +  G  +   T           A +L+ R +    +ITFC  +DQ LGGG+P G+ TE+CG PGVGKTQ  +QLAVD QIP  FGG+ G+A+YIDTEGS  VER   + +A V+H   I K   ++  +   +V    E +L  + ++R HD+ E LA    LP FL +HP V+L+V+DS+AF FRH+F+D+S+RTR+L+ +AQQL ++A Q S+AV+L NQMTT++       G ++S LVPALGESW HAAT RL+L W G+ RFA L KSP  R  TVP+ +   G RD     P
Sbjct:    1 MMQRDVASFAFAPAVKVRLISAGFLTAKDIRDLRPTELSKEAGISQQEALEVLQEV------RRGPAEQGAAESRLT-----------ALELLEREQALGTVITFCSALDQALGGGIPVGKTTEICGAPGVGKTQLCIQLAVDAQIPGCFGGLGGQAVYIDTEGSFLVERALDVATAAVQHCTLITKDTEQREALQSFTV----ETVLSQLFLFRCHDYVELLAQTHLLPDFLSQHPKVRLMVIDSIAFPFRHSFEDLSLRTRLLNGLAQQLIQIASQHSVAVVLTNQMTTRI-------GQNQSMLVPALGESWGHAATQRLILHWEGKHRFASLYKSPSQREATVPYQITPHGFRDVQLPDP 336
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BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: H2ZS27_LATCH (RECA_2 domain-containing protein n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H2ZS27_LATCH)

HSP 1 Score: 288 bits (736), Expect = 4.650e-85
Identity = 162/363 (44.63%), Postives = 228/363 (62.81%), Query Frame = 1 
Query:  286 EICSLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARELKTSPQEGQAILRDVAAATGSREGDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRK---QGIMDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKLVVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRDAHAAAP 1365
            ++ S  +AP++R +L+  GF T+ DL+G++PS+L++E+  S +E   IL+ V   T   EG      R       S R+    +A +L+ + + +  IITFC  +D +LGGGVP  + TE+CG PGVGKTQ  +QLAVDVQIP  FGG++GEA+YIDTEGS  V+R   +  A VEH + I +S ++   Q  M+  SV    + +L  I+ +R HD+ E LA    LP FL  HP V++VV+DS+AF FRH F D+S+RTR+L+ +AQQL   A    +AV+L NQMTT++       G ++S LVPALGESW HAAT RL+L W G++R A L KSP  +  T+P+ +   G RD  A  P
Sbjct:    4 DLGSFPLAPAARSKLIGAGFETVEDLKGIKPSELSKEIGISKEEALEILQIVKGDTVEGEGRHAVASR-------SVRK---CTALELLEQEQAQNSIITFCSALDDILGGGVPVSKTTEICGAPGVGKTQLCLQLAVDVQIPECFGGLDGEAVYIDTEGSFIVDRAVDIAHAAVEHCKLITESHQENEQQKAMETFSV----DTILSHIYYFRCHDYVELLAQAHLLPDFLSAHPKVRVVVIDSIAFPFRHDFDDLSLRTRLLNGLAQQLISTANDYKVAVVLTNQMTTRI-------GQNQSMLVPALGESWGHAATIRLILHWEGKNRMASLYKSPSQKEATIPYQITFQGFRDIQAPVP 345
[Close]
BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: UPI00148A3B53 (DNA repair protein RAD51 homolog 3-like n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A3B53)

HSP 1 Score: 284 bits (727), Expect = 6.860e-84
Identity = 157/356 (44.10%), Postives = 223/356 (62.64%), Query Frame = 1 
Query:  286 EICSLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARELKTSPQEGQAILRDVAAAT--GSREGDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRKQGIMDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKLVVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRD 1347
            E+CS  IAPS + +L   GF    DL+ ++PS+L++E     +E   IL+ V + +  GS+  ++                    SA + +   +   PIITF   +D MLGGGVP  ++TE CG PGVGKTQ  MQ+AVDVQIP QFGG++GEA+YIDTEGS  VERL  +  A V+H  ++A   R +G  + +  V   E++L G+H +R HD+ E LA V  LP F+++HP +K+V++DSVAFHFRH F D+S+RTR+L+ MAQ   ++A +  +A++L NQMTTK         G +S LVPALGESW HA+T R++L+W G+ R+A L KSP  +   VP+ +   G+RD
Sbjct:    6 ELCSFPIAPSHKSKLTSAGFLITEDLKHLKPSELSKETGIGLEECLEILKLVCSESVDGSKRNEAP---------------KPAVSALERLKEEQSLPPIITFSEGLDNMLGGGVPLCKITEFCGAPGVGKTQMCMQIAVDVQIPSQFGGLQGEAVYIDTEGSFIVERLVDIAKATVDHCNEMA---RLEGFKEGEITV---ESVLSGVHFYRCHDYVELLATVHLLPEFIKKHPKIKVVLVDSVAFHFRHDFDDLSLRTRLLTTMAQSFIKLATEFKIAIVLTNQMTTKFS------PGEDSRLVPALGESWGHASTIRVILYWEGQKRWAWLYKSPSKKESRVPYQITMGGVRD 334
[Close]
BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Match: UPI0016036942 (DNA repair protein RAD51 homolog 3-like isoform X1 n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016036942)

HSP 1 Score: 284 bits (727), Expect = 9.670e-84
Identity = 160/353 (45.33%), Postives = 216/353 (61.19%), Query Frame = 1 
Query:  289 ICSLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARELKTSPQEGQAILRDVAAATGSREGDSTAGLRDGVGTGSSCRQNAGSSARDLIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRKQGIMDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKLVVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTTKVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPRLRHKTVPFAVVRVGIRD 1347
            I S  I P  +++L+  GF T  DLE V+P +L++ELK +P E   +LR V       +GD         G           +A D++   R +  IITFC  +D++LGGGVP  ++TE CG PGVGKTQ GMQLA+DVQIP  FGG+ GEA+YIDTEGS  V RL  +  A +EH + IA  +  +  ++  +   T E +L  IH +R+HD  E +A +  LP FL+ H  V+LVV+DS+AF FRH F+D+S+RTR+L+ +AQ    +A     AV+LVNQMTTK+   G G    ++ LVPALGESW HA+T R+LLFW    R+A L KSP     TVP+ V   G+RD
Sbjct:    5 IGSYPIPPYLKNKLITAGFSTAEDLEDVKPVELSKELKITPAEALEVLRVV-------QGDQKDPPSPDEGV---------KTALDMLQEEREQGGIITFCSALDELLGGGVPLTKITEFCGAPGVGKTQMGMQLAIDVQIPSAFGGLGGEAVYIDTEGSFMVHRLEDMAKAAMEHCRHIATVENNRDQLEAMADF-TVEHILSRIHFYRVHDWVELVALINILPEFLQEHSKVRLVVIDSIAFPFRHDFEDLSLRTRLLNGLAQNCIRLADSHKAAVVLVNQMTTKMGHAGDG----QAHLVPALGESWGHASTIRVLLFWEAGCRYARLYKSPTREEATVPYQVTVAGVRD 336
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig835.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8V6_ECTSI6.710e-15381.88Rad51 homolog C n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A835ZD48_9STRA4.360e-9348.93Rad51-like protein c n=1 Tax=Tribonema minus TaxID... [more]
A0A6P4XU31_BRABE4.980e-9047.58DNA repair protein RAD51 homolog 3-like n=3 Tax=Br... [more]
A0A7S1SLP5_9CHLO4.560e-8945.40Hypothetical protein n=2 Tax=Tetraselmis chuii Tax... [more]
UPI001425896F1.340e-8845.40DNA repair protein RAD51 homolog 3-like n=1 Tax=An... [more]
A0A7S3UDT2_9CHLO3.740e-8645.15Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
UPI00155FC7CC4.230e-8543.41DNA repair protein RAD51 homolog 3-like n=3 Tax=Ac... [more]
H2ZS27_LATCH4.650e-8544.63RECA_2 domain-containing protein n=1 Tax=Latimeria... [more]
UPI00148A3B536.860e-8444.10DNA repair protein RAD51 homolog 3-like n=1 Tax=Cr... [more]
UPI00160369429.670e-8445.33DNA repair protein RAD51 homolog 3-like isoform X1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig835contigA-nodosum_M_contig835:172415..186470 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G8V6
Preferred nameRAD51C
PFAMsRad51
Model size2941
Max annot lvl2759|Eukaryota
KEGG rclassRC00032,RC00226,RC00571,RC01560
KEGG koko:K00615,ko:K10870
KEGG ReactionR01067,R01641,R01830,R06590
KEGG Pathwayko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03440,ko03460,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230,map03440,map03460
KEGG ModuleM00004,M00007,M00165,M00167
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000150,GO:0000217,GO:0000226,GO:0000280,GO:0000400,GO:0000707,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000730,GO:0000819,GO:0001709,GO:0002064,GO:0002065,GO:0002066,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006403,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007059,GO:0007062,GO:0007066,GO:0007127,GO:0007131,GO:0007135,GO:0007140,GO:0007141,GO:0007143,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007293,GO:0007294,GO:0007304,GO:0007306,GO:0007346,GO:0007389,GO:0007596,GO:0007599,GO:0008094,GO:0008150,GO:0008152,GO:0008298,GO:0008821,GO:0009314,GO:0009611,GO:0009628,GO:0009653,GO:0009798,GO:0009888,GO:0009948,GO:0009949,GO:0009950,GO:0009951,GO:0009952,GO:0009953,GO:0009987,GO:0009994,GO:0010212,GO:0010389,GO:0010564,GO:0010927,GO:0010971,GO:0016043,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0016889,GO:0016894,GO:0017111,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0030054,GO:0030154,GO:0030703,GO:0030706,GO:0030707,GO:0030716,GO:0030717,GO:0030720,GO:0030855,GO:0031023,GO:0031974,GO:0031981,GO:0032200,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032991,GO:0033036,GO:0033061,GO:0033063,GO:0033065,GO:0033554,GO:0034622,GO:0034641,GO:0035825,GO:0042060,GO:0042148,GO:0042592,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045003,GO:0045132,GO:0045144,GO:0045165,GO:0045787,GO:0045931,GO:0046483,GO:0046843,GO:0048232,GO:0048285,GO:0048468,GO:0048471,GO:0048476,GO:0048477,GO:0048518,GO:0048522,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050817,GO:0050878,GO:0050896,GO:0051177,GO:0051179,GO:0051276,GO:0051321,GO:0051641,GO:0051674,GO:0051704,GO:0051716,GO:0051726,GO:0060249,GO:0060429,GO:0061982,GO:0061983,GO:0061988,GO:0065001,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070192,GO:0070727,GO:0071704,GO:0071824,GO:0071840,GO:0090068,GO:0090304,GO:0090305,GO:0090735,GO:0097159,GO:0098813,GO:0140013,GO:0140097,GO:1901360,GO:1901363,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902749,GO:1902751,GO:1903046
Exons10
Evalue1.47e-161
EggNOG OGsCOG0468@1|root,KOG1434@2759|Eukaryota
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-15_004400.1
EC2.2.1.1
Descriptionstrand invasion
Cds size1221
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig835.15.1prot_A-nodosum_M_contig835.15.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig835 178734..184996 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870185.3948913-UTR-A-nodosum_M_contig835:172414..1726171680870185.3948913-UTR-A-nodosum_M_contig835:172414..172617Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig835 172415..172617 +
1680870185.4090452-UTR-A-nodosum_M_contig835:178690..1787331680870185.4090452-UTR-A-nodosum_M_contig835:178690..178733Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig835 178691..178733 +
1680870185.5481017-UTR-A-nodosum_M_contig835:184996..1864701680870185.5481017-UTR-A-nodosum_M_contig835:184996..186470Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig835 184997..186470 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870185.4236937-CDS-A-nodosum_M_contig835:178733..1788811680870185.4236937-CDS-A-nodosum_M_contig835:178733..178881Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig835 178734..178881 +
1680870185.4412644-CDS-A-nodosum_M_contig835:179201..1793321680870185.4412644-CDS-A-nodosum_M_contig835:179201..179332Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig835 179202..179332 +
1680870185.4536884-CDS-A-nodosum_M_contig835:179824..1799441680870185.4536884-CDS-A-nodosum_M_contig835:179824..179944Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig835 179825..179944 +
1680870185.4640515-CDS-A-nodosum_M_contig835:180629..1808181680870185.4640515-CDS-A-nodosum_M_contig835:180629..180818Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig835 180630..180818 +
1680870185.4825563-CDS-A-nodosum_M_contig835:181286..1814001680870185.4825563-CDS-A-nodosum_M_contig835:181286..181400Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig835 181287..181400 +
1680870185.4931216-CDS-A-nodosum_M_contig835:182463..1825561680870185.4931216-CDS-A-nodosum_M_contig835:182463..182556Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig835 182464..182556 +
1680870185.5076342-CDS-A-nodosum_M_contig835:183429..1835071680870185.5076342-CDS-A-nodosum_M_contig835:183429..183507Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig835 183430..183507 +
1680870185.518781-CDS-A-nodosum_M_contig835:184173..1842921680870185.518781-CDS-A-nodosum_M_contig835:184173..184292Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig835 184174..184292 +
1680870185.5324225-CDS-A-nodosum_M_contig835:184767..1849961680870185.5324225-CDS-A-nodosum_M_contig835:184767..184996Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig835 184768..184996 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig835.15.1

>prot_A-nodosum_M_contig835.15.1 ID=prot_A-nodosum_M_contig835.15.1|Name=mRNA_A-nodosum_M_contig835.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=407bp
MNVPPMAPAMARTEICSLTIAPSSRDRLLRGGFRTLRDLEGVQPSDLARE
LKTSPQEGQAILRDVAAATGSREGDSTAGLRDGVGTGSSCRQNAGSSARD
LIVRGRHKKPIITFCREIDQMLGGGVPRGELTEVCGTPGVGKTQFGMQLA
VDVQIPHQFGGVEGEALYIDTEGSLTVERLSQLCSAVVEHLQKIAKSKRK
QGIMDLDSVVPTQEALLGGIHVWRLHDHAEQLAAVRTLPAFLERHPDVKL
VVMDSVAFHFRHAFQDISVRTRMLSKMAQQLNEVAQQRSLAVLLVNQMTT
KVRITGQGRGGSESSLVPALGESWAHAATNRLLLFWNGEDRFAELLKSPR
LRHKTVPFAVVRVGIRDAHAAAPGAAAAAKRSSSSERRDRGDREHVAKRH
TSGSLP*
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mRNA from alignment at A-nodosum_M_contig835:172415..186470+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig835.15.1 ID=mRNA_A-nodosum_M_contig835.15.1|Name=mRNA_A-nodosum_M_contig835.15.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=14056bp|location=Sequence derived from alignment at A-nodosum_M_contig835:172415..186470+ (Ascophyllum nodosum dioecious)
CGGCGAAGCTTGACAAACAAGACAGTAGGAGGAGGCACGACGAGCAATAA
ACAGCTGCAGAGCGCCATCGCAGCTTGTAAGATTACAGAAATTAAAGAGC
CAGCGGAGAGCATTCCCAAAACAGCCTTGAAGTGGAGTCAACGGCAGGAG
AGGGACTAACGTTAACCAACTAGGGAGGGCTGCCGACACTGCCTACAACG
GTGGTAAGCATGACGACACGCCAGCAGCTACGTTTTCCCCTCAATAACGC
CTAAGCATCATCTGCCATCTGCCAAGAAGAAAAAATACTACGAGTAGGCC
GTCCTTTAACTCGAAAGACAGCCATCACAAGAAGTAGAACCGCCAAAAAC
GACTATTATATTATACTGTAGTATTACAGTAGCTTAGTATAACGCGTAAT
AGTTTTTGTCCTTACAATTTTCCCCCTTGATTGGGTGTGGTGGATGCTCA
GAAGGTTCACTACTCTGTACAGTACAGTTGTTGTTGTTGTTGTTGTTTCT
CACATTCAGCGTATTGGTTGCCAACCCGAAAAAACTACTTTACACGGTGG
CCAATCCCGCTCGTGGTCTgCTGAACAGGGAAAAGAGAACAAAAGAAAAA
GTCTGGCAGCATACCCCCCCACCCCCACACTGCTCGTTCGGAGAAAATAA
ATAAAATCACGCGACGCATCTACAGGCGCTACGCAGGTGGTCGGTCTCGC
GTCCGTACAAGGATACCTCCGGCTCGTCGACTAGGCCTATGGGTGTGGCT
TCGCAATTCTACACTCCCGTCTGCGATAATAAGGTTCCCAGTCTCGTTGC
TTCTCTCTTCTCCTGGCGATGTCTAGCCGCGTCTACCTCTTCTTTCCTCC
ACGCGGCCATAAACCTCCGCCCACCCTCCGTGACCGTCTCAACCCACACC
TCAGCATTTAAAGCCGTCGCTTTCCAGTCCCCCGCTATGCCAAACGTCCG
GATGTCGCTTATATGGTCACTCTTTTTCCAGATGCGTTCAGATGTTTTTT
GAGTATACGAGGCACTGCTCCAATGGCTGCGGTTCTTCGGATGCGTCATG
ACAGGTCTGTGTTCAGCATCTCAGGCTCAACCTTCCCACTTGCCGGCCCT
ACACTGACTAAAACAGTAAATTCTGTTCACTATTTTAAAAAGTACAGTAC
ACAGTTCAGCACCAACGGATCACTCATCCGTGTACTGTACTTTTTCCCCC
TTTCCGCTATCCGTTTCTTCATTACTGTTAGTATGTACCTGGTATACCTT
TTTTCAGTAGTAGCAAGGAAGGAGCACACCCACAGTTAGCCGATATTGTT
GTACTGCAGGATCCCGCTCTATTACCGCAGCACCAGTAGGTACAACATCG
GTGAGGAACAAAGCCAAACTGTACTGTGAACGTTGTAAACTGTAAACAAA
GCACTTCCTTCCCCCCATGCATAATCTAATTAATATAATCAGGGTTTTCC
GGCTACGTCATATGAGGGGAAGGATCTGTGCCGCCTATAAATACTGACAA
GTATATTTTTCTCATTATTTGGTGACGTATCGTACGCTGTCGTCTGTCTT
TTTCAACAGCAGTACGCGTGAGTACTACTTTTTAATACTAATTCTGGTCA
CACATGTAGCAAGATTATGGATCAACTGGGTAAGGTTGCCAATCCTGCAC
GTGGTCAGCTGAACAGGGAAAAAATATTTCCCTGTCCGCGTTCGCGCCTG
AGAATTTTGTCTCGCGAGACGGGTTCGGCAGTCCCGTCCCGCGCCAGCCT
GCTCATTCTCCATACTCAGGCCGAATATGGTGCTTACTCACGGGGTTCCT
CCCGAGTTCCGCGGCGGGCGTCCATTTATTTATTTTAAATCGCCATACGC
CATCGGGTCAGTCCCGAGTTTATCGGGTCACGCAATTGCGCACCGATGAC
GTTCACTGCCGAGAGTCCGCCGGCACAGGGCCAGTAAACCTCAAGGTAGT
TCCGAACGAGTGCTGCCTTGGCAGGTCACGATGGACCAATTAATATGCGC
CTCTCTTTCCCATACCCGCTATTGGTATGAAGTGGCCATGTTGACAGTAC
CGGCGGTATACAGTAGCAACCTCACATTAACTGACTGATTCGCTGTGTAT
TCCAGTAGGGAAACACGTGTGATGTAAAATTAGTTCAAAAATAATTCAAA
GCCAACAGCTTTAGTACCGTACACCCGCTGTATATAGAAGTCAACGAGAG
TATTAGACTAATAGAACAGCGGTACAGCAGTATGTATAAATGGTACATTC
ACACGGATGAGCAAAGAGTACGTTCCGGTTTCTACCATAGAGTGTTTCGA
GATTTGTCATGGAACAGTAGCCTTCTTGATTCACCGTAGTTGTCAAACGG
AGGAGCGACAGCGGGAGAGCTTGATAGTTTCTTGGAGGAGTCACTAGAAC
CCATTGCCCCGACCCACTCCCCCTTCAATCCCCAAGGAGTATAATGAGTT
CCAAGCCGAAACAAGAAACAAGCCGAATCGCCGGATGTTCCGACGGTACC
ACGCAGCGCACTTTCCACGGTGGCTCCTTCAGTATTGACAAGAATCAGTG
AGCGCTCGAACTCGAAAGCATTCGTTCCCCGTGGCGGTGCTGGAGGCACT
ACCCTCGAGCATCGCGCCGCGGTCGGTGGGCACAAGCGTAATCCGTCCTC
TAACCTCTGCACTTTTGAACGACTACTTGACAGGAGATTTGGATATTCCG
GTTAATTCAGTAGTGTCATGCGTCGATGAGTAACCAGTACTACGTGGCCG
TAAGGATGAACAGTAAGTGAGCGACTCAAAACTGCATATTCCATACGCCG
CGGCTCTTGAGAACGGGCACGTGCATATATCAGCGGTTATCCACAAGACA
TTGCATCAAACAATCCCTGCGCGAAGGCCTCGCGGCACTTCGCCTCGGCC
ATTAGGACACGAGCATCGCCGTTTACTCGAGTGGGGGGTCATTATGTACG
CTACCTCAGCGGTTGTGGTCCATGTGGAAACGATTGTGTACATGCTCGAT
GGATGGTTTGCGTGTACACGAACTATGGTGTGGCGTGGGCGCGAACAATG
TGCGTGCGCGCGATGAGGAAGAGTGCGCGAGCTTTTGGCACGGTGTACTT
CGGCACTCGAGGGTTGAATTTTTGGACGCGGGGGGAGGCGTAAATCCGTG
CGAGGGCGGTGTCCGTGTTCGTGGGCATCAGACACGATGTACGTGGGTGC
GAGGGAAGGTTCAAGTTCGCCGTCTCTACACCTTACAAGCCATGCGCCGC
GGCCCTTGAGCACGGGCACGCGCGTTTCCGTGCTTACCTAGCTGTACCTT
GAAAACGATTGCTGCTGAGTGCGTGCACCATAGACGGTATGCGTTCGTGC
GAGAGGCGGTTTGGATGCGTGTGAAGCACAGTTTGCGTGAGCTTGAAGGA
TGATGTGCGGTCGCGAGGACGGCGTGCGTGCGCGAGATGAGTGATGTGCG
TGGACACCTTGCACCATGTGTGCGTGCGCGCGAGGGTTGAGGTGCATCAG
CGCGGGGAAGCGTGGAAAGGGGAAATATGTACGTGCGTCTGGGGGAAGGT
GTACAAGCGCACAAGGGGCGGTGCGCCTGGGCGCGGGCGACGATGTACGT
CAGGGCGAGCGGCGTTTGGTTGTTTTTTGTTTTTTGCGCGCGCGCGTTGA
AAAATGCCCTTTTTTTAGGGTGTGTGCGTGCGCGAGTGCTGAACGGCCGC
TTCATCCTCTCCACGGGCAACGCCGTCGCTTCCACTTCAGTAGCAGCCGG
CAGAGAACCCTAAACACGAAGCCTAGATGTACGTTTAAAAATATATACCA
GTATATATTTAATTGAAGGAAAACCCTTGATCATCTCCAACCCCCATGAA
CTAAGCCAACATATGTTGTACGGTACACATGTTACTTTGTATAGGTTATG
GTACGGATGAGCTTAGTCCTACGCTCGTCGCCCGAGTGAAGTATGTATGG
TTGTTTGTATGGTCATCGCACACAGTAGCAGAGTGGACATTAACCGTGTA
TGGTTGCCAATCCTGCTCGTGGTCAACTGAACAGGGAAAATGTTGGGGGG
GGGTTTTGCCTTTTCCCGTTCGCGCCTCCTGAGACTTTGTCTTGCGAGAC
AGGTTCGGCCGTCCCATTCTGCACACACCCAGCAAGCTAAATCTGGCAGG
ATCGGTTTATTCACGGGCTCCTCTCCTTCCTCCAGCTTTCCGCGATGTAT
ATTATGTATACTACATGTACTAAATATACTATAGATACTATAGATACCAT
AGCTACTATATATACTAAATATGCCATAGATACGATAGATACTGAAGATA
CTATAGATAATAGCATCCATCTATACCGTCAACCGCCACATCGGATCAGT
CCCGAGTTTGTCCGAGTCACGTAATGGTGTATCGATGGCGTTCACCGCCG
AGAGTCCACCCGGCACAGGGTTAGACGTCCTCAAGGTAGTTCCAGTAGTT
CCAGTAGCGAATGTTACCCTTTCAGGTACATATCACCATGGACCAACTAA
TGTGCGCCTCTCTTTGTGCGATGCAGACAAAGTATCGGGGAGGACTTCGC
ACGTAGACTGTCTGTAGTACTTAGTTGATGCACTCGTAATTCTCTACAAG
TGCGTGTTTGTGGAATCGAATCTTGACAGGTTGATTTTCTCCACTCTGCT
TTTCTCCATTCTCATTTTTGGTAGCGGGACGCGGGAAAATTTGAGTCGGC
AAAATGCCAACCATTGGTTGACGAGGTGTAGAAGCGCTGAACTTACATCG
CGATTAAAAAAAAAACTATCTACTAAAATATATACTACTATCTATAATAC
AGTTACAGGTACTACTTGTACATGCTATGCACTGGTGCTCGTACTTACAG
TTTGCTGAAGAACCTGAGCGCACCTTATCCGTTTTCAAGGCGATAAGCTC
TGAGCTGCTCAGAGGGAACGGAGTAGCTCAGGAGTTTACGCATTGAAAAC
GGGCCAATAGATGTGTTTTGTGGGCTCAAACGAACACCGGCCACGCACAA
TTGCCGGGGCGCTCCCCTCGCCATCGACTGGTACGCAAGCAACTTCCTTG
GCGAACAGTGCTCGCGGTCGGATCCGAGCTCACAATTTAAACATCCACTT
TCAAGGTTATAGCCCCTGGGCTACCTAGTCAAGTTGCTGACTGACTAGGG
GACATTGACTCGAAAGCGGACACATATAAACCGCTCCGAATATCCACCCT
TCCGGTAGGGGTATATAATGATACTGTATACCGTATACTGTATCGAAGCG
CTTGATTGGGAACATCGCCAGTTGACTGTTTGCACAAAAACTCTACATGG
GATTCATAGCGTCAACTTATAGTATGTCGCGGAGAAGCCCACCGTTGTAA
TGTACACTTATACTTATTGCCACGTGGTGGGTACAGTACACAACAAAAAA
CAGGAAGGTGAAAGAAAGCCACATCCTATCGACCCTACTGTCAATATATA
GTTATCATCCAATAAAATATATATTCCCGCATTCGAAACTTTTCATAGTA
CAGTACATCTTCACCCGAGTGGTTTGGTAGGTAACCATGCACACCTATTT
ACTATTAATATTAAATAGTGCGGAAGTCGTGAGTTCGATTCTTGCCTTCG
AGTTCTTGTTCATGCTTGATTGGTTTCCTGGGAGTTTCATGTTCCAAAAC
CCGACTCAATGACTTGAGTTGCTTTGGTCTGTGGTGAATCTGCAGCCGCC
GAAGGGGGACACCCTCTTTCCGCTGAGCGCGCTCTCCGAGTTCACGCCGT
CTTATCAAGACCTGTATCCCGATTTGCAACCCTTGTAACCTCGTGGCCCT
GGTCTGGATGGTACCGTAGGTCTGGCCTAGAGTTCTGGACTGTTGCCTGG
CCCAGAATTTAGAAGAATCCGGGCCGGAACGTGCAGACCTCTCAGAAGTT
GGGACCTGCTCGGTTTTTTATCAAAATAATCTGCACCAGTCTGGGCGAGG
GGCCTGGATATCTGACTCTCTTTCGTCCGGCGGCGGCTCTGCAGTCAATA
CTGCTTGATGCCCAGTGCAAAATCCAATGGTCTTCAGACACCTGCAACCC
CCCTCCCCCCGTTGCGAGTCTTCGAACCGCATCCTCTAACACCCTGATTC
TCTCAAAAGCACAATACGACTTCAGCCAATGAATCAACGTCGTTTCAAAA
GACTAATGGGTGAAGAATATTCCTCCCCAAACGTCACGCACAAAAAAAGC
ATGTATCGGTTATTTTTGCACTCCCTCCCCCCCCCCGATTTTTCCTCTTC
TCTTTTTCCCCCCGCGGTGCGCACAGTGTGACGTATCCGCGAGCCACAGT
CGTCGGTGTCTCTGACGCTATGAACGTGCCGCCAATGGCCCCGGCGATGG
CTCGCACAGAGATTTGCAGCTTGACCATCGCCCCGTCGAGCCGGGATCGC
CTCCTTCGCGGGGGGTTTCGAACTCTACGAGATTTGGAAGGCGTGCAGCC
TTCAGATCTCGCTCGAGGTACGATTGATGGCACTACTCTTGCATATACGA
GAGAACATTGCCCACTCGCGTGGATTCGTTCCGTGCCGTACCATCAGCCG
GTCGCATCGGCGCGGGATGGAATAGTCGGGCTCTGCCGCTGTGCCGGCGC
GACCCACGCTGCGTTCCTGCATATTTCTAGACGAGCAGCGGCAATTAACC
AAGTGGTCCGGGGTATCTGTTCCTCCGGAGTTCGCTCGCCTTGCCCGGCT
TTTCTTACCGTATGTATCCTGTCCGGCATACCGGGTTTCCGTCGCCGTCC
TTCCCCTCCCCCCGCCCCCGTGCGTGCGCGCTGACAGAGCTTAAGACGTC
TCCTCAAGAGGGGCAAGCGATTCTTCGCGACGTTGCCGCTGCCACCGGAT
CTCGCGAAGGAGATTCCACGGCAGGCCTCCGGGATGGCGTCGGCACTGGT
TCTTCTTGTCGCCAGAACGTAAGCCCGGACCGTTGGCACGTGCGCCCAGA
TTTTTTATACTAATAATAAGACAAAGTGGGAGGGGTGGGGGGGGTGGGAC
GATGACGTACGCCGAGGGTGGAACGCCTCGAATTTCATTGCGCTTTCGTT
TTCCCCAGAGTACCCGCTTTGAACGATAAATGGTCAGCGCGGATCAAGCG
TCACGCGCTCTATAGACCCAGAGGCGCTCTCCGCCTGTCTGCCTGTCCAC
CCTTTTGTTGTAGGGCTCTCCACAAGGTGGATCATCACGGCGTTTATTGC
CTGTCATGGGGCACCTTGTTGTTTCTTTTCGCTTGCAGGCGCTTGCCTCC
TGCAAAACCCGCAGCGCATTCTGTCGGCGATATCCCTGTTTCCGCCCTGT
GACACACTCTTCCTGTAGAGAAGTATTGGCGTTCTCTAGCCAAGCGTTAT
GACTTCTATGACCTCCCGGTCTCTACGCCGTGATGTGGGGCCGATCGCGA
TGTCGGGCAGGCGGGGTCTTCGGCCAGGGACCTAATCGTTCGTGGAAGGC
ACAAGAAGCCCATTATCACCTTCTGTCGAGAGATTGACCAGATGCTCGGC
GGCGGCGTTCCCAGGGGAGAGCTGACGGAGGTGCGAATGCGATGCGATCG
CCCCCCCACCCCGCCCCCTCCCCTTCCCCTTCCCTCCGGCGATGCGAACC
GCTGCGGTCATACCACAGCCAGCCCTATTCATAGAGACGTGTCTACGAAA
GCTGGTTCGTGGACGCTGACAGTGGTTTGATTGGCCCAATTCTGTCAGTC
TCATCTTTTTCAAATCCGAGCTTTTCGGAGGGTTCGCAGGGCCATGAGGG
CACCGGGGCAGTTGGATTTATGACACAACCCATCCACTAGGACCTAGCAG
GTCAGATCGGGGTTAAGGTTAGGGTTGGGATCGGGTCGGGTCGGGTCGGG
CCCACGGGGCGAAAGAACAACTGAAAAATGTCGCACATCAGCAAATTAAA
AGCGTGATTAGCTCGGACCCGAGAAAACCGAAAATATCAAATCATTGAGT
GGCGTCTCAGGTGACCAATGGAAACAGTGCTCGCGAACCAGTTCTCGTAG
TATAGACCAATGGGTATAGTGCTCGCGAACCAGTTCTCGTAGTATAGGCC
AATAGAAACAGTGCCCGCGAACTATTTTTAAGTTAGGGAGCCCTGAGACC
GAAGGACCTTAAGTATTAACACGACTTACTGTGCGTGTGTGTGTGTGTGT
TTTTGCTTCTTCCGACTACGACAACGCCGTCGCCACGAACGGACTATCGC
GACACATCACCAAAGGTATGTGGGACGCCTGGCGTGGGCAAGACGCAGTT
TGGCATGCAGCTGGCTGTAGACGTCCAGATACCGCACCAGTTCGGCGGCG
TGGAAGGGGAAGCGCTGTACATCGACACGGAGGGGAGTCTCACCGTGGAG
CGGTTGTCCCAGCTGTGCTCGGCGGTGGTCGAACACCTCCAGAAGATCGC
GAAGGTGCCGGTCGTGTGTGCCGTGGTCTCTCGCGAGCATTTGCCTTCTC
GGGACATTGCGCCTTGGCCGGTTTTGTATTTTGTATTTTGTACCTATTTA
TTTTTGGAGGGAGGGGATGAGGCTGGTAGAAGACCGCCTGGTGCTTGCGA
CAAGAAAAGTTGTTCGCGAGGAATCATTGTACCTTAACACGTACCTTGTA
TGTATCGCTATGTATACCTTTATTGGTACCTTTATATATTGACCTTGATA
CGTACCTGATATGTAACTTTCATGTAGATAAGTATTTTCTATGATATGTG
CTGCCATGTGAATCTTTATCTGTACCGTAATTTGCCATAACATCTTCGGT
CAAGAGCCACGATCGCCTACTGTACCCACAGTACCTTAAAAGAAAAGGCA
AATCGAGGGGGTGTATCTTGCTCACGCGGCTGCGTCCCCCCCCCCCTTGA
TATCCGCGTCCCGCGCGAGCAGAGCAAGCGCAAGCAGGGGATAATGGACC
TCGACTCGGTGGTACCGACGCAGGAGGCGCTCCTCGGTGGCATTCACGTC
TGGCGGTTGCACGACCACGCGGAACAGCTCGCGGCGGTGAGGCTTGACTC
GGACCTCGGGAGTTGCTGTTGCACGAGCGCGCGAGGCCATTCAATCCTTT
CGCCCGTCCTTCTGGAGCAGAATCTCGCCGTGTCGCCCCCAAGTACCCGT
GCGGCTATTGTGTTGGGACTGGGTGCTGCCGATGCTCTCTCTCTCTCTCT
CGCCCGCAACGTATTGTGACAGAGCATCGTGCTGCTGCCCTCCGGTGGTC
TGGGCTAAAAGTGGTGGGAACAAGAAGTGTGTCTGGTGGCACATGAAATC
AGCCCCCCTGCGGGGACACTCATTCTGGGGGGCAATTTTTTTCATAGGGG
GTAACCCCTTACTCTTCCCCCCCTCCCTCCGCCATGACTATTCGTCGCCC
AATCAGTACGACCCGGTGGTGGCATCACAAGGCAACCCATTCAGATAAAA
GATAAAGTAATGTACGGAAACAATATGTTTACTTTTTTGCCTTACCGGGT
TCTTTCTCTATATATATATTATTAGAGCACGTTTGATTTTTATTCGAAGA
GTTTTGTCGCCTACGACGCGGTACGTAACAAAAATCAAGACAACATGTTT
GTTTTGGCCATAAATACTGAGCGTAAGAAGAAGAAGAAAAAACGTTGTAC
GGGGCGGCGTGACTAAAAATACGACACACTGAGAGCGAGTGGAAATGAAA
AAGAAACAGGACTACCTTCAATATTGAGCGCCGCTAGTAGAAAACACTCA
AGTTCACTACCCTCGTCGGTCTCTCCTCCCCATCGCAGTCGTACCATAAG
GGAGCTATTAATAGCTAGCTGCTGTAGACCAACCGAAGGCAGCAAAGAAC
CCCCTTTTTCGGAGCTTGCATATTGCCGCCAAGGACTCGCGTGACGTTGT
CTGAATGAAATCGGCTGACGTGCACCACATGAAATTACACCAAGATTGTA
TTACTCAACACTGGTATCTGGGGTGTAGGGTCCCGTCGTACCGACAAGGA
AGCCTTTAAAACCATCCTTCTCCGTCGACGGGCATGAAAACTGGCCGTCA
TTTTTTTCTCTACGTCGTTTTGTTTTACACAAAATAAATATAAAACAAGG
TGCGGACGCTTCCGGCGTTCCTGGAAAGGCATCCCGACGTGAAGCTGGTC
GTCATGGACAGCGTGGCGTTTCATTTTCGACACGCCTTCCAGGTACTGGC
TGTATTCAGGGTTTTTTTTGTGGAAATAAAGGACTGCTTGCCAAGCGGCG
GCTTTTTCGTTCTCTTTAGTAATCATTTGGTGAAGGAAGaAAAAAAAAAG
GTCACTGGTTGAAATGCCAACAAAAATATGGGTAAAGTATGGAAGCTTCA
TTTTTTACATATTACACCAAAAAACTTTTGTTTCTTTGAGTTCATATTAT
ATTAATTAATAAATTTTATTAGTTATGCCTTTATTATCGGTACTCCCATT
CCAGAAGATAACATTTTGATGCGATTTATAAAAATAGTTTCTATATTATT
TGCAAATAAACACCTCTTTCTACCTCCCTCCCCCCCCTGAAGATTACGCC
TCTTTCTAGAGGAAATATATTATTTAGCTAGCAGACGTAATCTTTTTTAA
TCGGGTAACGAGACAGTCTGGTGGGGTGATGGCTATAACTGAGCCGTTCT
CCGCTGCGGGCACGAGGTACACAGCCCCACTTGTCGTCTCGCGCGGGGTA
CGCTCTGCGAGTTCCCACGACGACCTCTGTGATGAGGCGCTGCGCGGCCC
TGTCGAACGGGTAGATATGTCATCCTCGCAGCTCTTTGTGCTTTCACGGC
GAAGTATATGTCTTCTGCGCTCCGAAAAATATTTGCCGGCGATACCGTGC
CGCTCCGGACCGTGGCTTTCCGTCGCGAATAGTATAGGTGCGTTCGTTAT
GCCACGTTTTCGCTCGGGGCGAGTCGTTGCGGGCGGTGGTGACGACGCAA
AGGAAAAACTCGTGCGGCAAACAGAAGTGGGGATTTTTTATATTCTTTTG
AACCGACACCGTAACTTTAGGCCCGCCTCTCCCGAATCACGTGCGCCTCG
AACTGCTGTGCGCAGGATATCAGCGTACGCACCCGAATGCTGAGCAAGAT
GGCGCAGCAGCTCAACGAGGTCGCGCAGCAGCGCTCGCTAGCGGTGAGCG
AGGCAGATGAGGTCTCGGAGGACGTGCTCTCGTCGGGTGGGGGTAGGGGA
GGAGAGGCATCCTGTTTCCGTATCTCTCCCACGATCTTCGCTACAACTGG
CAGATGTCACCCACCCTCAATACTTACAGAAAATTTGTGTCGAAACGTTT
AGTTTTCGTGAATATTAAAAACTGTATAGGTCTAACCGTATAACTACACG
TAGTGTAACGTTCGGGGAGAACCCACCCCAACCAAGTTCGTCTCCCTGGG
GGAGAAAAAATGCCGCCCCCCGCCATCACCCGTGCACACCCCTGCGTTAA
CATGAAGGTCGCGACTCGACAGTCAAGTAGTGCTGCCTCGGTGGGACAAC
GCTTCCTCCCATATATTTCAAAAACAAAAAGTACAGTTGCCGTTGTGTAA
CGTACGTACGAAGTAAATGTTAAGGAGAAAAGAAAGGGACGGGGGAGGCG
TCCTCCCCAAACATTATAAATGAATACGTTACTGTATACCAGGTAGATTA
TATGTTTGGGGATATCGCCCCCAGTGCAGTACTTCATGTGCTGCACACTA
AGCGTTACTCTTGCTTCAACCGTCCTAGCAAGTACATGGCCGAATCCATA
CGTGGGCATGGGCATGTATGGTGAGCCCCCGGCGGATGCTTTCCGTCTCA
ACCGCACAGGTTCTGCTGGTGAACCAGATGACGACCAAGGTAAGGATTAC
GGGCCAAGGGCGAGGGGGATCAGAGTCATCCTTAGTTCCCGCGCTAGGCG
AAAGCTGGGCCCACGCCGCCACGAACCGGTGCGCGCGGCTTGGTTGCATT
TTTGGCCTTTTGTTGTTTTGCTGTTTACCCCGCACCCCCCCAAAACTGTT
CCGCTCGCTACAACTCTGGTGGCTTTCCCCGTCAATCATGCACTGGAGTT
AGTTGTTGTATTCAATAATGTGGAAAGTAAACATTAAGATTCAGTACTAG
ACCAACTCAGGATAGTGGTGTACTCGTAACTGGAACAAATAAATCAAATA
TTTTATTTAGTGTATTCCAGAAAGAGGTACACATCGGTGAACAAGCAAGG
GAAACGAAAATGACGTTGAAATTGATTTTGAACAAAAAACAAACAATAAG
TAAAAAACCTCCAAGAACGCGCAAGAAAAAAAAACACACACACAAAAAAA
AACACGCACATAACAATAAAATAATAGAGCTATAGCTATTTATTTATTTT
GCCCTGATTGCTTCTGGTCCTCCTCTCTGGGCCCCTCGCAAAACCTATTA
CAGGTTGCTCCTCTTCTGGAACGGCGAGGACCGTTTCGCGGAGCTTCTCA
AGTCCCCCCGCCTTCGGCATAAGACGGTGCCGTTCGCCGTTGTCAGGGTG
GGGATTCGAGATGCTCACGCGGCGGCTCCTGGGGCGGCGGCGGCGGCCAA
GCGCTCTTCGTCTTCGGAGAGGCGCGACAGAGGAGACAGAGAACACGTGG
CGAAGCGACACACGTCCGGGTCTCTGCCGTGATTTTCGACTCACGGGTTA
GGACATACAGAGTATATATTTTTTTTTATATATATATATACGAAGTATAG
CTCTATATTTGTCGGTCCCCAGAAGGCCACGGGTAAAAACTATCAAGTCA
CATTTCTCTCTCTGGTAATGTATCGATAGTGTATCATGAACATACAGCTT
AGATGTAGATCTAGGTAGTGTACCCCTGATTTTATTTTTATTTGTTTTAG
ACGAGTTTTCTTTACGTACAAGGTTAGAGCCTACTGCAGTTGTTGTACTG
TAACACCGTTATAGCGGGATTGGCCACCGTGTAAAGTAGTTTTTTCGGGT
CGGCAACCAGTACTCTGAATGTGAGAAACATCAACAACAACTGTAGAATG
ACGATGTGTTCTTGCAACAAGAATACGCAGCATTAATACGTATTGATAGT
AGGAATTGCTACATCAGCACTAGAATAGCGTTGGGGGGGGAGGGGATGAT
TTATGTCCTCCCCTCTCCCCAGCAAATTCTGAGATTCGCTCGTGATTTTC
AGAGACTGTTAAAAAAACACCTAGATTAAACGAAAGAGATGTCCCTGTCG
CCGAATCATCTCCAGGTAGTCATGGGGATCTGTCTCATCAGGGTCTGGGA
TTTTTGTCATCTTCGTGCGATTGGTCACGTGTCAGCTACAGCGTTACGCG
CATCCGTTAGTTGGTTGGGCTGCAGACCCGTGGGCGTGGAGTGGTACTTG
TATCATCATCACGTTCCGTTATGTTGATCTAAGAGCGGAGCAATGGATTG
ACGGGTTCGTGTGCGACACCAGGTAGGGCCTGGTAGAGCACTTGTGTTGA
GCCGGTAAAAAAAATGCATATATTGTGTTCCACAAGGAAGAAGGCGTGAT
CGTGATATGGTATTAGTCCTCGCCCCCAGTTTCGACTTTTTAACAAGAAG
AGTACTGCCTGAACATACATACCTTCATTGTGCATGTGCGCATGTCTTTT
ATAGGGTGCTACCACTCGTGCGGATTCTTCTCCCCGCGGCACCAGTGCTA
TCGCGTGAGGATTTGAACTTCCAATGTATGTGTGGGGAGCACACCACGTG
GAAGTATTTTTGTAGCACTTACACCTGACGCGGGTAAAAAATATGCACCA
TCCCCTGTACAAACATTCGTGGAAAACGGTCTCCCATCAACCCAAGGCAA
GGACGTCTCCCAGCGTCGGAAGACTTGACCCCTTAGGGACGAGGGCACAC
GGCGATCGTAAGGCTTGGCTTATTTTCTTTCTTTTCGCGGAAAGCGAGGA
GCACCCGCTCGGATCATGGACAGACGATCCTGTAGGCTCGGTTTTGTCTC
GTGGATGGAGATGCTTTTCCGCGAATGTTTGTACGGGGGATGGTGCATAG
TGGAAAATCTCTGAGCTGAATGGGACTCACACGGGAGAGGTGGTGCTGTA
CTAGGGGTTTGGTGAGGAGGCTCGACATGAGCACATGTCAGACGAGTATA
AAGACC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig835:172415..186470+

>mRNA_A-nodosum_M_contig835.15.1 ID=mRNA_A-nodosum_M_contig835.15.1|Name=mRNA_A-nodosum_M_contig835.15.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1221bp|location=Sequence derived from alignment at A-nodosum_M_contig835:172415..186470+ (Ascophyllum nodosum dioecious)
ATGAACGTGCCGCCAATGGCCCCGGCGATGGCTCGCACAGAGATTTGCAG
CTTGACCATCGCCCCGTCGAGCCGGGATCGCCTCCTTCGCGGGGGGTTTC
GAACTCTACGAGATTTGGAAGGCGTGCAGCCTTCAGATCTCGCTCGAGAG
CTTAAGACGTCTCCTCAAGAGGGGCAAGCGATTCTTCGCGACGTTGCCGC
TGCCACCGGATCTCGCGAAGGAGATTCCACGGCAGGCCTCCGGGATGGCG
TCGGCACTGGTTCTTCTTGTCGCCAGAACGCGGGGTCTTCGGCCAGGGAC
CTAATCGTTCGTGGAAGGCACAAGAAGCCCATTATCACCTTCTGTCGAGA
GATTGACCAGATGCTCGGCGGCGGCGTTCCCAGGGGAGAGCTGACGGAGG
TATGTGGGACGCCTGGCGTGGGCAAGACGCAGTTTGGCATGCAGCTGGCT
GTAGACGTCCAGATACCGCACCAGTTCGGCGGCGTGGAAGGGGAAGCGCT
GTACATCGACACGGAGGGGAGTCTCACCGTGGAGCGGTTGTCCCAGCTGT
GCTCGGCGGTGGTCGAACACCTCCAGAAGATCGCGAAGAGCAAGCGCAAG
CAGGGGATAATGGACCTCGACTCGGTGGTACCGACGCAGGAGGCGCTCCT
CGGTGGCATTCACGTCTGGCGGTTGCACGACCACGCGGAACAGCTCGCGG
CGGTGCGGACGCTTCCGGCGTTCCTGGAAAGGCATCCCGACGTGAAGCTG
GTCGTCATGGACAGCGTGGCGTTTCATTTTCGACACGCCTTCCAGGATAT
CAGCGTACGCACCCGAATGCTGAGCAAGATGGCGCAGCAGCTCAACGAGG
TCGCGCAGCAGCGCTCGCTAGCGGTTCTGCTGGTGAACCAGATGACGACC
AAGGTAAGGATTACGGGCCAAGGGCGAGGGGGATCAGAGTCATCCTTAGT
TCCCGCGCTAGGCGAAAGCTGGGCCCACGCCGCCACGAACCGGTTGCTCC
TCTTCTGGAACGGCGAGGACCGTTTCGCGGAGCTTCTCAAGTCCCCCCGC
CTTCGGCATAAGACGGTGCCGTTCGCCGTTGTCAGGGTGGGGATTCGAGA
TGCTCACGCGGCGGCTCCTGGGGCGGCGGCGGCGGCCAAGCGCTCTTCGT
CTTCGGAGAGGCGCGACAGAGGAGACAGAGAACACGTGGCGAAGCGACAC
ACGTCCGGGTCTCTGCCGTGA
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