prot_A-nodosum_M_contig8319.11.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8319.11.1
Unique Nameprot_A-nodosum_M_contig8319.11.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length284
Homology
BLAST of mRNA_A-nodosum_M_contig8319.11.1 vs. uniprot
Match: D7FUF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF1_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 4.430e-84
Identity = 147/185 (79.46%), Postives = 160/185 (86.49%), Query Frame = 0
Query:    1 MKGKGRDRIGGSTTHMDGMGSFTAIGGLKDGVKRVTAFETADCATALAVAKFRSFGKPGGSSYVVNNRIDDDLTLRRRLSTAGVRFSTFLIRAGDAYLVPSGALHEFMNEVPCLSVAWNIMPHPANCAVAMEMAEASAMEAEAELGINTDRSQSAIEYAPPEAMRERVAGSVIKRWLERSLLRRR 185
            M+GKGRDRIGGSTTHMDGMGSFTAIGGLK G K VTAFE+ DCATALAVAKF++F KPGGSSYVVN+RIDDD TLR RL  AGVR+ TF IR G+AYLVPSG LHEFMN +PCLSVAWNIMPHPANC VAM MAEASA EA+AELG+NTDRS SAIE+APPE+MRER A  VIK  LER +L RR
Sbjct:    1 MQGKGRDRIGGSTTHMDGMGSFTAIGGLKAGEKSVTAFESEDCATALAVAKFKAFAKPGGSSYVVNDRIDDDATLRNRLHRAGVRYRTFPIREGEAYLVPSGCLHEFMNVIPCLSVAWNIMPHPANCEVAMRMAEASAEEAQAELGVNTDRSASAIEHAPPESMRERHAAWVIKTALERGILLRR 185          
BLAST of mRNA_A-nodosum_M_contig8319.11.1 vs. uniprot
Match: A0A6H5KVS1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVS1_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 6.290e-71
Identity = 128/167 (76.65%), Postives = 140/167 (83.83%), Query Frame = 0
Query:   19 MGSFTAIGGLKDGVKRVTAFETADCATALAVAKFRSFGKPGGSSYVVNNRIDDDLTLRRRLSTAGVRFSTFLIRAGDAYLVPSGALHEFMNEVPCLSVAWNIMPHPANCAVAMEMAEASAMEAEAELGINTDRSQSAIEYAPPEAMRERVAGSVIKRWLERSLLRRR 185
            MGSFTAIGGLK G K VTAFE+ DCATALAVAKF++F KPGGSSYVVN+RIDDD TLR R   AGVR+ TF IR G+AYLVPSG LHEFMN +PCLSVAWNIMPHPANC VAM MAEAS  EA+AELG+NTDRS SAIE+APPE+MRER A  VIK  LER +L RR
Sbjct:    1 MGSFTAIGGLKAGEKSVTAFESEDCATALAVAKFKAFAKPGGSSYVVNDRIDDDATLRNRFHRAGVRYRTFPIREGEAYLVPSGCLHEFMNVIPCLSVAWNIMPHPANCEVAMRMAEASVEEAQAELGVNTDRSASAIEHAPPESMRERHAAWVIKTALERGILLRR 167          
BLAST of mRNA_A-nodosum_M_contig8319.11.1 vs. uniprot
Match: L1K4C4_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K4C4_GUITC)

HSP 1 Score: 129 bits (324), Expect = 5.530e-30
Identity = 72/170 (42.35%), Postives = 105/170 (61.76%), Query Frame = 0
Query:    2 KGKGRDRIGGSTTHMDGMGSFTAIGGLKDGVKRVTAFETADCATALAVAKFRSFGKPGGSSYVVNNRID-------DDLTLRRRLSTAGVRFSTFLIRAGDAYLVPSGALHEFMNEVPCLSVAWNIMPHPANCAVAMEMAEASAMEA----EAELGINTDRSQSAIEYAP 160
            +G  +D +GGST H+DGMGS  AIGGLK G K VTA E  D + AL +A F+S+ KPGGSS++ N+ +D       +  +L+   + + VR+ TF I AGDAY++P+G  HEF+N+ P LS+AWNI+P     + +        ++A    E +   + DR  SAI++AP
Sbjct:  262 RGDKKDGLGGSTMHLDGMGSLVAIGGLKCGKKLVTAVEACDASLALKIAGFKSYAKPGGSSFLTNDPVDRSFSGEEESCSLKDLWTMSHVRWGTFEISAGDAYVIPAGMPHEFLNQEPSLSIAWNILPSCEQSSASEPWHFLLLLQALHDVETDFSGSPDRMMSAIDHAP 431          
BLAST of mRNA_A-nodosum_M_contig8319.11.1 vs. uniprot
Match: A0A7S3Y1V6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1V6_HETAK)

HSP 1 Score: 121 bits (304), Expect = 1.550e-28
Identity = 68/164 (41.46%), Postives = 93/164 (56.71%), Query Frame = 0
Query:    8 RIGGSTTHMDGMGSFTAIGGLKDGVKRVTAFETADCATALAVAKFRSFGKPGGSSYVVNNRIDDDLTLRRRLSTAGVRFSTFLIRAGDAYLVPSGALHEFMNEVPCLSVAWNIMPHPA-NCAVAMEMAEASAMEAEAELGINTDRSQSAIEYAPPEAMRERVAG 170
            + GGST HMDGMG+  A GG+KDG+K +TA    D   AL  A F ++ KPGGS ++VN  I     +RR  +  G+RF+ F ++ GDAY++P+G  HEF N  P +SVAWN +P P    A A  +   S  E    L     R Q A+++AP   +  R  G
Sbjct:  159 QFGGSTMHMDGMGTTVACGGMKDGLKLITAVAPEDAPQALRAAGFTTYAKPGGSRHLVNPPIGP--AVRRLWARLGIRFACFELKKGDAYVIPAGVPHEFQNLEPSVSVAWNYLPSPGFQSAAACSLLAYSLAELRENLQRQPQRQQEALDFAPEPYLLARAEG 320          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8319.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FUF1_ECTSI4.430e-8479.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVS1_9PHAE6.290e-7176.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
L1K4C4_GUITC5.530e-3042.35Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A7S3Y1V6_HETAK1.550e-2841.46Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.650Cupincoord: 7..120
e-value: 2.5E-5
score: 25.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..284
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 12..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8319contigA-nodosum_M_contig8319:15805..17652 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8319.11.1mRNA_A-nodosum_M_contig8319.11.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8319 15805..17652 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8319.11.1 ID=prot_A-nodosum_M_contig8319.11.1|Name=mRNA_A-nodosum_M_contig8319.11.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=284bp
MKGKGRDRIGGSTTHMDGMGSFTAIGGLKDGVKRVTAFETADCATALAVA
KFRSFGKPGGSSYVVNNRIDDDLTLRRRLSTAGVRFSTFLIRAGDAYLVP
SGALHEFMNEVPCLSVAWNIMPHPANCAVAMEMAEASAMEAEAELGINTD
RSQSAIEYAPPEAMRERVAGSVIKRWLERSLLRRRCKNSIAAGAPLPGLA
MGRGQDEDQGQGAPYHDYSPALKEVLEEATRIVTTQTVQPQTIPRQDLQH
QEISPQVMHQETVPPQTVQKQAVPQQKVPPQTVP
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