prot_A-nodosum_M_contig831.7.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig831.7.1
Unique Nameprot_A-nodosum_M_contig831.7.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length242
Homology
BLAST of mRNA_A-nodosum_M_contig831.7.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 5.180e-72
Identity = 119/201 (59.20%), Postives = 144/201 (71.64%), Query Frame = 0
Query:    2 NNKVHDNHHYGFDPHDDSDYLTIANNVVYNNVNHGIIASKRCNNLKIYENKVYSGGDRAAGIFLHRSSDNCEVYGNVIFDMQGPGLAILESFDTDIHDNTFKNVTFGVRISLGGGNNTVYNNVLEECTNYGLFTYHGSDTPEVSSDGRPSENFFYDNAISDTKTSVKIKEANKTVITGNTFTGASRLEFNDAEGTAWSSNT 202
            NN +HDNH YGFDPHDDSDYL IA N VYNNVNHGIIASKRCNN+KIY+N+VY GG  AAGIFLHRS D+ EVYGN I +M   G+A+LE+   DIHDN      FG+R+ LG  NN V++NV +   N G+FTY GSD P V   GRP +N FY+N I  T+T VKIKE++   IT N F+G + +EFN+A    WS N+
Sbjct:  222 NNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNS 421          
BLAST of mRNA_A-nodosum_M_contig831.7.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 3.050e-65
Identity = 109/201 (54.23%), Postives = 142/201 (70.65%), Query Frame = 0
Query:    2 NNKVHDNHHYGFDPHDDSDYLTIANNVVYNNVNHGIIASKRCNNLKIYENKVYSGGDRAAGIFLHRSSDNCEVYGNVIFDMQGPGLAILESFDTDIHDNTFKNVTFGVRISLGGGNNTVYNNVLEECTNYGLFTYHGSDTPEVSSDGRPSENFFYDNAISDTKTSVKIKEANKTVITGNTFTGASRLEFNDAEGTAWSSNT 202
            NN++HDNH Y            +ANN VYNN NHGIIASKRCNN+KIY+N+V  GG  A GIFLHRSSDN EVYGN I++M   G+A+LESF+ DIHDN    V FG+R+SLG G N+VY+N   +C+++GL+TY GSD P+VS+ GRP+ N F +N ++++   VK K ++  V+T N FTG   LEF DA+ T WS N+
Sbjct:  244 NNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNS 431          
BLAST of mRNA_A-nodosum_M_contig831.7.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 3.590e-65
Identity = 112/203 (55.17%), Postives = 142/203 (69.95%), Query Frame = 0
Query:    3 NKVHDNHHYGFDPHDDSDYLTIANNVVYNNVNHGIIASKRCNNLKIYENKVYSGGDRAAGIFLHRSSDNCEVYGNVIFDMQGPGLAILESFDTDIHDNTFKNVTFGVRISLGGGNNTVYNNVLEECTNYGLFTYHGSDTPEV-SSDGRPSENFFYDNAISDT--KTSVKIKEANKTVITGNTFTGASRLEFNDAEGTAWSSNT 202
            N + DN  YGFDPHDDSD LTI+NN+VY N NHGIIASKRCNN+KI+ N+VY GG+ A GIFLHRSSD  EV+ NV+++MQ  G+A++ES+D +I+DN+F N  +G+R+SLG G N + NN+    T YGL+TY GSD P+V +S+GRPS+N F  N I        V IKE +  V   N FTG S  EF D+  T W  NT
Sbjct:  411 NIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613          
BLAST of mRNA_A-nodosum_M_contig831.7.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 6.270e-64
Identity = 115/200 (57.50%), Postives = 135/200 (67.50%), Query Frame = 0
Query:    2 NNKVHDNHHYGFDPHDDSDYLTIANNVVYNNVNHGIIASKRCNNLKIYENKVYSGGDRAAGIFLHRSSDNCEVYGNVIFDMQGPGLAILESFDTDIHDNTFKNVTFGVRISLGGGNNTVYNNVLEECTNYGLFTYHGSDTPEVSSDGRPSENFFYDNAISDTKTSVKIKEANKTVITGNTFTGASRLEFNDAEGTAWSSN 201
            NNK+HDN  YGFDPHDDSDYLTIA N VYNNVNHGIIASKRCNN+KI+EN+V  GG  AAGIFLHRSSD   V+ N I +MQ  G+A+LESFD  I+ N      +G+R+SLG GNN VY N   + + YGL+TY GSD P+VS DGRPS N    N + D    VKIKE +      NTF      EF ++  T WS N
Sbjct:  662 NNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGN 860          
BLAST of mRNA_A-nodosum_M_contig831.7.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 6.440e-64
Identity = 113/202 (55.94%), Postives = 139/202 (68.81%), Query Frame = 0
Query:    2 NNKVHDNHHYGFDPHDDSDYLTIANNVVYNNVNHGIIASKRCNNLKIYENKVYSGGDRAAGIFLHRSSDNCEVYGNVIFDMQGPGLAILESFDTDIHDNTFKNVTFGVRISLGGGNNTVYNNVLEECTNYGLFTYHGSDTP-EVSSDGRPSENFFYDNAISDTKTSVKIKEANKTVITGNTFTGASRLEFNDAEGTAWSSNT 202
            NN++HDNH YGFDPHDDSDYLT             IIASKRCNN++IY N+VY GG  AAGIFLHRSSD   V+ NV+ DMQ  G+A+LES + DI++N F +V FG+R+SLG   N V+ N+ E+ +  GL+TY GSD P +  SDGRPS+N F +N I +    VKIKE + TVIT N FTG S LEF DA+ T W  NT
Sbjct:  299 NNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNT 488          
BLAST of mRNA_A-nodosum_M_contig831.7.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 7.250e-59
Identity = 107/204 (52.45%), Postives = 135/204 (66.18%), Query Frame = 0
Query:    3 NKVHDNHHYGFDPHDDSDYLTIANNVVYNNVNHGIIASKRCNNLKIYENKVYSGGDRAAGIFLHRSSDNCEVYGNVIFDMQGPGLAILESFDTDIHDNTFKNVTFGVRISLGGGNNTVYNNVLEECTNYGLFTYHGSDTPEVSSD--GRPSENFFYDNAISDTKTSVKIKEANKTVITGNTF---TGASRLEFNDAEGTAWSSN 201
            NK+HDN  YGFDPHDDSD L IA N V+ N NHGIIASKRCNN+KI+ N VY GG+ A GIFLHRSSD+CEV+GN ++DM+  G+AI+ES    IHDNTF NV +G+R+S+G   N V NN   EC  YG++TY G+D PE S D  G   +N F+ N +   +  VKI++A   V T N F   +      F D E   W++N
Sbjct:  618 NKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNN 818          
BLAST of mRNA_A-nodosum_M_contig831.7.1 vs. uniprot
Match: D8LDB5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB5_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 3.800e-56
Identity = 103/204 (50.49%), Postives = 133/204 (65.20%), Query Frame = 0
Query:    3 NKVHDNHHYGFDPHDDSDYLTIANNVVYNNVNHGIIASKRCNNLKIYENKVYSGGDRAAGIFLHRSSDNCEVYGNVIFDMQGPGLAILESFDTDIHDNTFKNVTFGVRISLGGGNNTVYNNVLEECTNYGLFTYHGSDTPEVSSD--GRPSENFFYDNAISDTKTSVKIKEANKTVITGNTF---TGASRLEFNDAEGTAWSSN 201
            N++HDN  YGFDPHDDSD L IA N V+ N NHGIIASKRCNN+KI+ N VY GG+ A GIFLHRSSD+CEV+ N ++DM+  G+AI+ES    I+DNTF NV +G+R+S+G   N V NN   EC  YG++TY G+D PE S D  G   +N F+ N +   +  VKI++A     T N F   +      F D E   W++N
Sbjct:  679 NQMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGASRNVVENNKFSECDQYGIYTYQGNDEPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNN 879          
BLAST of mRNA_A-nodosum_M_contig831.7.1 vs. uniprot
Match: Q7XAK0_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK0_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 1.420e-55
Identity = 98/200 (49.00%), Postives = 130/200 (65.00%), Query Frame = 0
Query:    3 NKVHDNHHYGFDPHDDSDYLTIANNVVYNNVNHGIIASKRCNNLKIYENKVYSGGDRAAGIFLHRSSDNCEVYGNVIFDMQGPGLAILESFDTDIHDNTFKNVTFGVRISLGGGNNTVYNNVLEECTNYGLFTYHGSDTPEVSSDGRPSENFFYDNAISDTKTSVKIKEANKTVITGNTFTGASRLEFNDAEGTAWSSNT 202
            NK+HDN  YGFDPHDDSD+LT+ +N VY+N  HGIIASKRCN + I  N+VY G   +AGIFL+RSSD+  V GN + D    GLA++ESF+ D+ DN F+N  +GVRIS+G G N    NV+   T Y  ++Y G+D P+V   GR  +N F +N I     ++KI +A+ T   GN+F  A  + F+DA  T  S NT
Sbjct:   40 NKMHDNKGYGFDPHDDSDFLTVHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGASSSAGIFLYRSSDDAVVKGNYVHDNGDAGLAMMESFNADVSDNIFENNKYGVRISVGCGRNIFSKNVISGSTKYNAYSYLGTDAPDVVKSGRSKDNCFQENTIVGGIETLKIMDADGTEFIGNSFEDAVTIRFDDAARTVMSGNT 239          
BLAST of mRNA_A-nodosum_M_contig831.7.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 1.760e-54
Identity = 103/200 (51.50%), Postives = 129/200 (64.50%), Query Frame = 0
Query:    3 NKVHDNHHYGFDPHDDSDYLTIANNVVYNNVNHGIIASKRCNNLKIYENKVYSGGDRAAGIFLHRSSDNCEVYGNVIFDMQGPGLAILESFDTDIHDNTFKNVTFGVRISLGGGNNTVYNNVLEECTNYGLFTYHGSDTPEVSSDGRPSENFFYDNAISDTKTSVKIKEANKTVITGNTFTGASRLEFNDAEGTAWSSNT 202
            NK+HDN  YGFDPHDDSD+LTI +N V+NN  HGIIASKRCN + I  N+VY G   +AGIFLHRSSDN  V GN + D    GLA+LESF+ D+ DNTF+N  +GVR+S+G G N    NV+     +  F+Y G+D PEV   GR  +N F +N I     S+ +KEA+ T    NTF  A+ + F DA  T  S NT
Sbjct:  247 NKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNT 446          
BLAST of mRNA_A-nodosum_M_contig831.7.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 2.260e-52
Identity = 99/204 (48.53%), Postives = 130/204 (63.73%), Query Frame = 0
Query:    3 NKVHDNHHYGFDPHDDSDYLTIANNVVYNNVNHGIIASKRCNNLKIYENKVYSGGDRAAGIFLHRSSDNCEVYGNVIFDMQGPGLAILESFDTDIHDNTFKNVTFGVRISLGGGNNTVYNNVLEECTNYGLFTYHGSDTPEVSSDGRPSENFFYDNAISDTKTSVKIKEANKTVITGNTFTGASR----LEFNDAEGTAWSSNT 202
            NK+HDN  YGFDPHDDSD+LTI +N VYNN  HGIIASKRCN + I  N+VY G + +AGIFLHRSSD+  V GN + D    GLA+LESF+ D+ +NTF+N  +GVR+S+G  +N    N++   + Y  +TY GSD P+V S GR   N F  N+ S  + ++KIKEA+ T    N F         + F+DA  +    NT
Sbjct:  280 NKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNT 483          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig831.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRR8_ECTSI5.180e-7259.20Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JGU8_9PHAE3.050e-6554.23MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G8D9_ECTSI3.590e-6555.17Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LC73_ECTSI6.270e-6457.50Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D8LRM4_ECTSI6.440e-6455.94Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
A0A6H5JNF5_9PHAE7.250e-5952.45MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D8LDB5_ECTSI3.800e-5650.49Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAK0_9PHAE1.420e-5549.00Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
Q7XAJ8_9PHAE1.760e-5451.50Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D7FXE4_ECTSI2.260e-5248.53Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 69..91
e-value: 1500.0
score: 6.0
coord: 115..137
e-value: 56.0
score: 12.6
coord: 172..210
e-value: 3300.0
score: 3.5
coord: 19..41
e-value: 9.6
score: 15.2
coord: 92..113
e-value: 210.0
score: 10.7
coord: 43..67
e-value: 340.0
score: 10.0
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 2..141
e-value: 1.7E-14
score: 54.0
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..149
e-value: 5.6E-38
score: 132.8
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 5..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig831contigA-nodosum_M_contig831:253945..255653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig831.7.1mRNA_A-nodosum_M_contig831.7.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig831 253931..256448 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig831.7.1 ID=prot_A-nodosum_M_contig831.7.1|Name=mRNA_A-nodosum_M_contig831.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=242bp
MNNKVHDNHHYGFDPHDDSDYLTIANNVVYNNVNHGIIASKRCNNLKIYE
NKVYSGGDRAAGIFLHRSSDNCEVYGNVIFDMQGPGLAILESFDTDIHDN
TFKNVTFGVRISLGGGNNTVYNNVLEECTNYGLFTYHGSDTPEVSSDGRP
SENFFYDNAISDTKTSVKIKEANKTVITGNTFTGASRLEFNDAEGTAWSS
NTFEGLHFAPSMLDWPDGTGNHLRGEALQSTHLIVGLVARF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR039448Beta_helix
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence