prot_A-nodosum_M_contig83.49.4 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig83.49.4
Unique Nameprot_A-nodosum_M_contig83.49.4
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1305
Homology
BLAST of mRNA_A-nodosum_M_contig83.49.4 vs. uniprot
Match: D7FWR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR4_ECTSI)

HSP 1 Score: 369 bits (948), Expect = 1.780e-107
Identity = 272/701 (38.80%), Postives = 383/701 (54.64%), Query Frame = 0
Query:  285 EEKGAAVVRAQMSVLMVGFYEIIRQVTLHCEERGRLLDRIWSSLNELFEYVLREMTDTVASCERRLADMSKLIHRERQEKERQGSMHRDELQMTEKLLNERWSKKVRQLREREEQHSNLVTTNEETVKRLREWFPSFADYSNSAMASLLPTRPAE----------GEKVLSPQEALEKDLQRIQSAGLWVI-----FSGHGASSTASTLDSSDKNESEASHSDSTNAGGEKDEEGSSD---RSPVGVRLTSAKKGRDELVLTPKVEQLPFSDVFPGPLPAAGLIHQDTATMAQRPSKGDRGSLENREVVTCFRAEKRTRKHGAKAKAGGGARRGGHGRRRRECERKVIAGLMKHIEEVKEEGDELKREVVRAKEEGLRTASTAKEGAKALIQE-CAKAQGMFLSLMADPGPSVGVAFPGLLELLGMSTLTEQISTFRATQP-LGVAGVHYSLVSAARALVAYRREAAGSILSTSTAA------TIAAPAAVYLHSRSMAEFLYESELRRSDKLRAARATLRRLIASLLFWLPLEAAGGGR------SGTTVGVAAGAGASQRPPGFGKLPRDLAGHEKTALQQFQRLLRLRTLRTSRRDATTRDGDEPEGE-DDDEGNASGSKVRDPPASSVISGSS-GGSVSDCFTDAEECLWLRVFGALEIYARPRRTDANRQQQQPTLPDLVPLQRAVSMVEEIFGSD 951
            E + AA +RAQM+VLMVGF+E+IRQVT HC ERGRLLDRIW SLNELFE+VL EM+ TVA CE RL  M+ ++ +ER ++E + ++H++ELQ+TE+L+N RWSKKVRQL+++E ++ ++V  NE TV  L++W P+F  Y +S +A +LP  P                LSPQEALE+DL RI +AGLW +          + S +S ++ S  ++  A   D +N GG     G+S    R+PV  R  +A+ G           ++            A                                   RT   G ++ A                +RK++  L++   E     + L+ E   A+E   +  + AKE A+ L+Q+ C +A+G+ LSL+ADP P+    FPGLLEL+GM +L +Q+   R++Q  LG+AG H  +++AA ALVAYR                    T+ A +++ L  R + +FLYE+ELRRS ++  AR+ +RRL+ASLLFWLP   +   R      S    GV A A  + RPPG+G LPR +AGHEKTAL+QFQ LL +     S  D ++  G    GE D    +A  S   D  AS   S S  GG V D F++ EECLWLRVF A+E +A P RT+     Q PT   LVPL +A++ VE+IFG +
Sbjct:  138 EARKAAKIRAQMNVLMVGFFEVIRQVTQHCAERGRLLDRIWRSLNELFEFVLWEMSRTVARCEERLEVMNAVVEQERADRESRETIHKNELQLTEELINGRWSKKVRQLKDQEVRYGSIVAENERTVATLKQWLPNFETYGDSVLAKVLPPLPLSPPTQQQAAVVSAPPLSPQEALERDLNRIHAAGLWCVRRDXXXXXXXSISDSSMVERSSNSDRSAGSGDLSNRGGR----GTSPMTVRTPVNGRSGTAESGXXXXXXXXXXXRMS----------TAIATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTGVAGKRSLA----------------DRKMMDVLVQQGREAALRAEALRNETKEAEERASKVKADAKEHARDLLQQACGRAEGVILSLLADPAPTTPWPFPGLLELVGMKSLVDQVGVIRSSQGVLGIAGCHSCVIAAASALVAYRXXXXXXXXXXXXXXXXXXXXTVPAASSL-LRPRRLGQFLYETELRRSGRVGRARSAVRRLVASLLFWLPPPPSLSARARQLAASAEEAGVTAPAQPTSRPPGYGHLPRSVAGHEKTALKQFQSLLCVSNGEGSNGDGSSPGGFGGRGEIDPSAASAHNSNAGDATASPTESSSGDGGGVQDGFSEIEECLWLRVFAAVESHATPCRTEPR---QGPTPAHLVPLDKAIASVEKIFGGE 804          
BLAST of mRNA_A-nodosum_M_contig83.49.4 vs. uniprot
Match: D7FWR5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR5_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 2.170e-45
Identity = 116/255 (45.49%), Postives = 154/255 (60.39%), Query Frame = 0
Query: 1060 MHVANPGLPELAVRLLFYRAATSS--HTEGLPSVKGG---RGQLDGI---------------HKTHQGGPKAHQSKGEKAADAGANGAGAGGVSAVGLARAVLEFPLRCDGLEPLVVATASAKGVRELHRRLAFQAKEVVNETEQIIAVIKEAQGMDSSSTGA------LVPAAETAVVKARTSQLRAFETNANTSGNTLDVSRLWFSLRMLTVESALLKTYGGVGLTARAQDAIIQGRRVRMRRVLRALKAASR 1288
            MHVA+PGLPE A+R LF++AAT+       LP+ + G   RGQ                   ++++ G   + +  G+       +G      SA GLARA+  FPL C+GL PLV +TA+    R L +++A QAKE + ETE+++A I+EAQG  +   G        VP AE + V+ARTSQLRAF  NA+TS + LDVS+LW S RML  E+ LL+ YGGVG TARAQDAI QGRRVR+RR+ RA + A R
Sbjct:    1 MHVASPGLPEAALRHLFFQAATTGAPRPSSLPAARAGGDGRGQTTAPATXXXXXXXXXRTSNNRSNAGRSGSFRQSGKSDGXXXXDGET---TSASGLARAIAGFPLACEGLAPLVASTATELSARSLLKQVAHQAKEALEETEKVVASIREAQGTPAGQRGXXXXXXXFVPEAEISAVEARTSQLRAFMINADTSRSVLDVSKLWISRRMLVAETTLLRAYGGVGPTARAQDAIRQGRRVRLRRIFRAFETAWR 252          
BLAST of mRNA_A-nodosum_M_contig83.49.4 vs. uniprot
Match: A0A835Z723_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z723_9STRA)

HSP 1 Score: 177 bits (450), Expect = 2.000e-41
Identity = 146/484 (30.17%), Postives = 209/484 (43.18%), Query Frame = 0
Query:   34 PVGVSTAKDLELLGLLPGLAIPNIVGSTIYNNRANRAGHAGSVAASVLSSYIPHGGLREASVGSSLRGENHAYRRQDVSYLQDKPGHGRQIKQGEWSDV--VVPPSKIPQGARVIQTS----------VIKTDDPCY-------------------------QEWYDPAERMWHRIVFPAKRPSNREQVRLLERWMTMMLARHANELDHKRDRHRKKWCTDEGSVTSSAGDDNTRKPPSPKCLDDHPTSPNLDPFAYTRGDDPRGDTDGQSQTAFDGEGVREGAPGQREEKGAAVVRAQMSVLMVGFYEIIRQVTLHCEERGRLLDRIWSSLNELFEYVLREMTDTVASCERRLADMSKLIHRERQEKERQGSMHRDELQMTEKLLNERWSKKVRQLREREEQHSNLVTTNEETVKRLREWFPSFADYSNSAMASLLPTRP------AEGEKVLSPQEALEKDLQRIQSAGL---WVIFSGHGA 471
            PVG+ +  DL LLGL+P        G  I N+   + G AG         Y P   L    + S    +  A    D+S L D+PGHG  +K G+WS        S++P  ARV+++S           + T   C                          + W+D    +W  + FPAK+P NR Q  +LERW+T  L+R A E                                    +   P  P +            G T G                     K   +VR QM +L++G  EI RQVT HC ERGRLLD+IW SLN+LFEYVLREM+  +A  + RL D+S+ +  ER E+  + + H  +L+ T++ L+ +WS+ VR L+     H+     NE   + ++ W PSF  Y  S +  LL  RP      A     +S + AL  DLQR++ AGL   W +++G G+
Sbjct:   59 PVGLKSRADLVLLGLVPD-------GRRIDNSSPTQGGAAGHPLL-----YKPAKPLSVKPLSSLSNPDPTA----DISCLGDQPGHGVLLKAGQWSSGGGSAQTSRLPHDARVVESSPTLGLTAVCMAVTTRPDCQLSNAFCLNFALRSSPLITPRCTPDGERWWDEENGVWREVTFPAKQPGNRAQTVMLERWLTGALSRAARE-----------------------------------SMQARPDGPTV------------GGTGGXXXXG----------------KSVVLVRRQMDLLVLGLGEITRQVTFHCAERGRLLDKIWRSLNDLFEYVLREMSTALADSDGRLTDLSEALEAERAERRARDAQHAHDLRTTKEELSHKWSRVVRDLKGAAAGHAARAKQNEALTELVKRWLPSFDVYKESVLVRLLE-RPEGAPQAARRNPHVSAEHALAADLQRLKDAGLLGGWGVWAGSGS 462          
BLAST of mRNA_A-nodosum_M_contig83.49.4 vs. uniprot
Match: A0A6H5JE25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE25_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 6.310e-27
Identity = 106/276 (38.41%), Postives = 137/276 (49.64%), Query Frame = 0
Query:  691 MSTLTEQISTFRATQP-LGVAGVHYSLVSAARALVAYRREAAGSILSTSTAATIA----APAAV-YLHSRSMAEFLYESELRRSDKLRAARATLRRLIASLLFWLPL-------EAAGGGRSGTTVGVAAGAGASQRPPGFGKLPRDLAGHEKTALQQFQRLLRLRTLRTSRRDATTRDGDEPEGE-DDDEGNASGSKVRDPPASSVISGSS-GGSVSDCFTDAEECLWLRVFGALEIYARPRRTDANRQQQQPTLPDLVPLQRAVSMVEEIFGSD 951
            M +L +Q+   R++Q  LG+AG H  +++AARALVAYRRE                    PAA   L  R + +FLYE+ELRRS ++  AR+ +RRL+ASLLFWLP         A     S    GV   A  + RPPG+G LPRD                            ++  G    GE D    +A  S   D   S   SGS  GG   D F++ EECLWLRVF A+E +A P RT+     Q PT   LVPL +A++ VEEIFG +
Sbjct:    1 MKSLVDQVGVIRSSQGVLGIAGCHSCVIAAARALVAYRREXXXXXXXXXXXXXXXXXXXVPAASSLLRPRRLGQFLYETELRRSGRVGRARSAVRRLVASLLFWLPXXXXLSSPRARQLAASAEEAGVTVPAQPTFRPPGYGHLPRD---------------------------GSSAGGFGGRGEIDPSAASAHNSNAGDATGSPTESGSGDGGGGQDGFSEIEECLWLRVFAAVESHATPCRTEPR---QGPTPAHLVPLDKAIASVEEIFGGE 246          
BLAST of mRNA_A-nodosum_M_contig83.49.4 vs. uniprot
Match: A0A7S3GM15_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GM15_9EUKA)

HSP 1 Score: 57.8 bits (138), Expect = 9.700e-5
Identity = 74/291 (25.43%), Postives = 124/291 (42.61%), Query Frame = 0
Query:  107 RRQDVSYLQDKPGHGRQIKQGEWSDVVVPPSKIPQGARVIQTSVIKTDDPCYQEWYDPAERMWHRIVFPAKRPSNREQVRLLERWMTMMLARHANELDHKRDRHRKKWCTDEGSVTSSAGDDN---TRKPPSPKCL------------DDHPTSPNLDPFAYTRGDDPRGDTDGQSQTAFDGEGVREGAPGQREEKGAAVVRAQMSVLMVGFYEIIRQVTLHCEERGRLLDRIWSSLNELFE-YVLREMTDTVASCERRLADMSKLIHRERQEKERQGSMHRDELQMTEKL 381
            R+ D+SYL DK   G         + +VPP+ IP+     +       +    E Y+P +R WH  VFP+ RP++R     L + +  MLA      D K+            + T++ G D     +K  S K +            ++     + +  A TR    + D +   +     E   E  P   EE+ A + +    V +  FYE++RQV +HC ERG +L RIW     LF   V R   +T     R + D      R ++ +E++G +    +++T+++
Sbjct:  150 RKVDISYL-DKSASG--------VEYIVPPALIPESLFSYEKMPFPLTNTGEVE-YNPDDRTWHTKVFPSLRPASRYDAIALNKSLETMLA------DVKK--------LSSSAFTNAGGRDGPAGAKKGNSLKSVIPSRDADEISQNEERSMGVSREMHAVTRS---QSDQNKPEKGGHSSEDEEESQPVSAEEQIAFIDQ----VYIASFYEVLRQVYVHCVERGHVLLRIWRGREALFHGLVSRYRKET----NRLIKDNXXXXXRNKELEEKEGKLRSMAMRLTKEV 405          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig83.49.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FWR4_ECTSI1.780e-10738.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWR5_ECTSI2.170e-4545.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z723_9STRA2.000e-4130.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JE25_9PHAE6.310e-2738.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3GM15_9EUKA9.700e-525.43Hypothetical protein (Fragment) n=1 Tax=Palpitomon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 614..641
NoneNo IPR availableCOILSCoilCoilcoord: 343..363
NoneNo IPR availableCOILSCoilCoilcoord: 383..403
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 476..517
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1103..1123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 805..825
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 483..508
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 959..981
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 847..886
IPR019347Axonemal dynein light chainPFAMPF10211Ax_dynein_lightcoord: 288..404
e-value: 3.4E-6
score: 27.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig83contigA-nodosum_M_contig83:573392..588982 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig83.49.4mRNA_A-nodosum_M_contig83.49.4Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig83 573158..589140 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig83.49.4 ID=prot_A-nodosum_M_contig83.49.4|Name=mRNA_A-nodosum_M_contig83.49.4|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1305bp
MEFPQATSRAPRPPSYEPCESYSLCSRRSMRPHPVGVSTAKDLELLGLLP
GLAIPNIVGSTIYNNRANRAGHAGSVAASVLSSYIPHGGLREASVGSSLR
GENHAYRRQDVSYLQDKPGHGRQIKQGEWSDVVVPPSKIPQGARVIQTSV
IKTDDPCYQEWYDPAERMWHRIVFPAKRPSNREQVRLLERWMTMMLARHA
NELDHKRDRHRKKWCTDEGSVTSSAGDDNTRKPPSPKCLDDHPTSPNLDP
FAYTRGDDPRGDTDGQSQTAFDGEGVREGAPGQREEKGAAVVRAQMSVLM
VGFYEIIRQVTLHCEERGRLLDRIWSSLNELFEYVLREMTDTVASCERRL
ADMSKLIHRERQEKERQGSMHRDELQMTEKLLNERWSKKVRQLREREEQH
SNLVTTNEETVKRLREWFPSFADYSNSAMASLLPTRPAEGEKVLSPQEAL
EKDLQRIQSAGLWVIFSGHGASSTASTLDSSDKNESEASHSDSTNAGGEK
DEEGSSDRSPVGVRLTSAKKGRDELVLTPKVEQLPFSDVFPGPLPAAGLI
HQDTATMAQRPSKGDRGSLENREVVTCFRAEKRTRKHGAKAKAGGGARRG
GHGRRRRECERKVIAGLMKHIEEVKEEGDELKREVVRAKEEGLRTASTAK
EGAKALIQECAKAQGMFLSLMADPGPSVGVAFPGLLELLGMSTLTEQIST
FRATQPLGVAGVHYSLVSAARALVAYRREAAGSILSTSTAATIAAPAAVY
LHSRSMAEFLYESELRRSDKLRAARATLRRLIASLLFWLPLEAAGGGRSG
TTVGVAAGAGASQRPPGFGKLPRDLAGHEKTALQQFQRLLRLRTLRTSRR
DATTRDGDEPEGEDDDEGNASGSKVRDPPASSVISGSSGGSVSDCFTDAE
ECLWLRVFGALEIYARPRRTDANRQQQQPTLPDLVPLQRAVSMVEEIFGS
DSLPAGRFGSRRSTAAGAVETSRERKKSREEGSNPWLLVNHVAVEDTVMT
IKTAAAKHGGNHVELFDVTDAAITVGYRANREKLFQVLILMAEVADLAGE
LTFGTVSVVMHVANPGLPELAVRLLFYRAATSSHTEGLPSVKGGRGQLDG
IHKTHQGGPKAHQSKGEKAADAGANGAGAGGVSAVGLARAVLEFPLRCDG
LEPLVVATASAKGVRELHRRLAFQAKEVVNETEQIIAVIKEAQGMDSSST
GALVPAAETAVVKARTSQLRAFETNANTSGNTLDVSRLWFSLRMLTVESA
LLKTYGGVGLTARAQDAIIQGRRVRMRRVLRALKAASRGKRASGLPSAGD
GHSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019347Axonemal_dynein_light_chain