prot_A-nodosum_M_contig8262.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8262.3.1
Unique Nameprot_A-nodosum_M_contig8262.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length526
Homology
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BLAST of mRNA_A-nodosum_M_contig8262.3.1 vs. uniprot
Match: D7G4D9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D9_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 1.560e-20
Identity = 123/441 (27.89%), Postives = 184/441 (41.72%), Query Frame = 0 
Query:   67 WKVFHSAGGERKRCFGDLLPYIIVIAILQLIPFSTSGVSATAGLKQGRSVTVIGSLSDPDNEPIDTLSLEALKDLQLGERSAPFLFGSPELGNYGTNVSNLAWSVSYSGVSSSSMTDGGGPNLRIYGSGYTVEQDGIGKGTYAISTCLVVSEDGGD-YTVNTC-EGVQVEIEPLEIVVEGRQYNVKWSQDECSGP-TEYAVFNERVSYKNRSLTLESWEGTFTESEMVEGTTVTALCANIFESIIEACIFEVGSHVYVGDWNPADYQDCDD-DSDPVVSMATVEV-----QGKDGTLLASDEFKAAASMFAEVVAGSGTISSRQQLALVLGIFSRMSCMKIGVGTAYYPETVVIVSISRVVLVLWGLLFVVGLVV--YLREICVGTKVFIPSTAWDWFAVGAREC--LRDEGSSCSN--RPAHHNYATRYGLGKPWVNDRD 492
            W VF S+   R      +LP ++  A   +I F+TSGVSA+ G  +G  V V+G                              L GS     Y  N                 +  G    + ++G+ Y   +      T  I+ C+ VSE  GD + ++ C EG+ V+       V+     V     ECS       + N+ V    R  T E  +GT   +         A C++I ESIIE+C++E G  +Y GDWN     +C + +  P +S+  ++      QG D   L        A+M AE+ AG+G ++SRQQL  VLG   R+  M   V TAY P  VV + IS  V V+  L  V+  +   +++    G   F+P +  +W A  ARE   L  +GS  S   +P   +Y+  Y  G     D +
Sbjct:   63 WDVFKSSKTRRWTTLA-VLPVLLGGAASMVIDFTTSGVSASIGHTEGAEVPVLG------------------------------LVGSDVRHEYKVNP----------------VGTGSEQGVYVFGNKYDTPE------TVDITFCVEVSEIEGDAFAISECREGLIVDKSVKSFYVKSVITGVIVDLQECSVLYVSIPLGNQGVGIVERDFTFEDTDGTEVAAA--------ATCSSITESIIESCVWESGGILYFGDWNIEGAGECGEVEFPPFMSILAIDYGERVEQGNDTAALL-------AAMTAEIFAGTGLLTSRQQLVDVLGAIVRLESMAWDVQTAYDPLNVVEIGISAWVPVVLLLALVLPAMAWGFVKWHIRGKYFFLPVSPAEWSACAARELSELGKDGSRSSGTAKPLDEHYSKVYAFGSVVGTDEE 435
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8262.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4D9_ECTSI1.560e-2027.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8262contigA-nodosum_M_contig8262:14182..17261 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8262.3.1mRNA_A-nodosum_M_contig8262.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8262 13979..17387 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8262.3.1 ID=prot_A-nodosum_M_contig8262.3.1|Name=mRNA_A-nodosum_M_contig8262.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=526bp
MTYGLETQMDVKAVNTLVTIIASFLVLFLGCVLQKCLTRRFWERSSKDTP
ADMLVSEGFDGLKEFAWKVFHSAGGERKRCFGDLLPYIIVIAILQLIPFS
TSGVSATAGLKQGRSVTVIGSLSDPDNEPIDTLSLEALKDLQLGERSAPF
LFGSPELGNYGTNVSNLAWSVSYSGVSSSSMTDGGGPNLRIYGSGYTVEQ
DGIGKGTYAISTCLVVSEDGGDYTVNTCEGVQVEIEPLEIVVEGRQYNVK
WSQDECSGPTEYAVFNERVSYKNRSLTLESWEGTFTESEMVEGTTVTALC
ANIFESIIEACIFEVGSHVYVGDWNPADYQDCDDDSDPVVSMATVEVQGK
DGTLLASDEFKAAASMFAEVVAGSGTISSRQQLALVLGIFSRMSCMKIGV
GTAYYPETVVIVSISRVVLVLWGLLFVVGLVVYLREICVGTKVFIPSTAW
DWFAVGARECLRDEGSSCSNRPAHHNYATRYGLGKPWVNDRDRIITQPMS
WTRVQHKYEGGAINGEKPTTWKTLL*
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