prot_A-nodosum_M_contig820.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig820.2.1
Unique Nameprot_A-nodosum_M_contig820.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length163
Homology
BLAST of mRNA_A-nodosum_M_contig820.2.1 vs. uniprot
Match: D8LBS0_ECTSI (eIF-5a domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS0_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 3.130e-106
Identity = 152/162 (93.83%), Postives = 156/162 (96.30%), Query Frame = 0
Query:    1 MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGAEIKNGFEDGKTLVVTVMAAMGHEQIVSYKEESG 162
            MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVV RNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYP+GFG EIK  F++G TL VTVMAAMGHEQIV+YKEESG
Sbjct:   39 MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGNEIKAKFDEGATLCVTVMAAMGHEQIVTYKEESG 200          
BLAST of mRNA_A-nodosum_M_contig820.2.1 vs. uniprot
Match: A0A6H5KDL5_9PHAE (eIF-5a domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL5_9PHAE)

HSP 1 Score: 311 bits (797), Expect = 1.000e-105
Identity = 153/162 (94.44%), Postives = 156/162 (96.30%), Query Frame = 0
Query:    1 MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGAEIKNGFEDGKTLVVTVMAAMGHEQIVSYKEESG 162
            MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVV RNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYP+GFG EIK  FE+G TL VTVMAAMGHEQIV+YKEESG
Sbjct:   93 MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGNEIKAKFEEGLTLCVTVMAAMGHEQIVTYKEESG 254          
BLAST of mRNA_A-nodosum_M_contig820.2.1 vs. uniprot
Match: A0A835Z7R2_9STRA (Eukaryotic translation initiation factor 5A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7R2_9STRA)

HSP 1 Score: 249 bits (636), Expect = 1.760e-82
Identity = 115/160 (71.88%), Postives = 141/160 (88.12%), Query Frame = 0
Query:    2 ATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGAEIKNGFEDGKTLVVTVMAAMGHEQIVSYKEES 161
            AT++ LN+YDFT +DAGASHT P +AGQIRKGGYIVIKG PCKV NVSTSKTGKHGHAKANFTA DIFTGKKLED++P++H TSVP V R +YQLLDISDDGF SLLTE GDTKDDL+LP +P+GF  +++  F+ GKTL+VTV++AMGH+Q+++YKE++
Sbjct:    6 ATDEALNNYDFTSSDAGASHTFPMDAGQIRKGGYIVIKGRPCKVANVSTSKTGKHGHAKANFTAIDIFTGKKLEDIVPTSHATSVPNVARVDYQLLDISDDGFLSLLTESGDTKDDLKLPGFPEGFDEQLRTEFDAGKTLIVTVVSAMGHDQVMAYKEDT 165          
BLAST of mRNA_A-nodosum_M_contig820.2.1 vs. uniprot
Match: A0A7S2UU65_9STRA (Eukaryotic translation initiation factor 5A n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU65_9STRA)

HSP 1 Score: 231 bits (588), Expect = 3.050e-75
Identity = 110/156 (70.51%), Postives = 135/156 (86.54%), Query Frame = 0
Query:    6 KLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGAEIKNGFEDGKTLVVTVMAAMGHEQIVSYKEES 161
            KL+D+ F   ++GAS TIP EAGQIRKGG+IVIKG PCKVVNVSTSKTGKHGHAKANFTA DIFTGKK ED++P+THTTSVP V R EYQL+DISDDG+ SLLT+ GDTKDDL LPT+P+GF  EI+  F++GK++V+TV++AMG +Q+VS KE++
Sbjct:    7 KLDDFHFDTGESGASLTIPMEAGQIRKGGHIVIKGKPCKVVNVSTSKTGKHGHAKANFTAIDIFTGKKYEDIVPTTHTTSVPNVSRAEYQLIDISDDGYLSLLTDSGDTKDDLVLPTHPEGFADEIRAAFDEGKSMVLTVLSAMGTDQVVSMKEDT 162          
BLAST of mRNA_A-nodosum_M_contig820.2.1 vs. uniprot
Match: A0A8K1CGM3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGM3_PYTOL)

HSP 1 Score: 229 bits (583), Expect = 1.540e-74
Identity = 109/154 (70.78%), Postives = 128/154 (83.12%), Query Frame = 0
Query:    8 NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGAEIKNGFEDGKTLVVTVMAAMGHEQIVSYKEES 161
            +DY F  TDAGAS T P EAGQI+K G+I+IKGHPCKVVNVSTSKTGKHGHAK NFTA DIFT KKLED++PSTHTTSVP V R EY LLDIS+D F SL+ E GDT++D++LP+YPDGF  EI++ FEDGK LVVTV+ A G EQI+S KE++
Sbjct:    3 DDYTFESTDAGASETYPMEAGQIKKNGFIMIKGHPCKVVNVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVSRKEYTLLDISEDDFVSLMDESGDTREDVKLPSYPDGFANEIRSDFEDGKQLVVTVLKACGTEQIISKKEDT 156          
BLAST of mRNA_A-nodosum_M_contig820.2.1 vs. uniprot
Match: M4B4L4_HYAAE (Eukaryotic translation initiation factor 5A n=18 Tax=Peronosporaceae TaxID=4777 RepID=M4B4L4_HYAAE)

HSP 1 Score: 225 bits (573), Expect = 5.300e-73
Identity = 108/160 (67.50%), Postives = 131/160 (81.88%), Query Frame = 0
Query:    1 MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGAEIKNGFEDGKTLVVTVMAAMGHEQIVSYKEE 160
            MA E++  D+ F  TDAGAS T PSEAGQIRKGG+I+IKGHPCKVVN+STSKTGKHGHAK NFTA DIFT KK ED++PSTHTTSVP V R EY LLDI+DD FCSL+ + GDT++D++LPT+P+ FG EI+  F DGK LV+TV+ A G EQI++ KE+
Sbjct:    1 MAEEEQ--DFTFHSTDAGASETYPSEAGQIRKGGFIMIKGHPCKVVNMSTSKTGKHGHAKCNFTALDIFTNKKYEDIVPSTHTTSVPFVSRAEYTLLDITDDDFCSLMDDSGDTREDIKLPTFPETFGEEIRADFNDGKQLVLTVLKACGTEQIIAKKED 158          
BLAST of mRNA_A-nodosum_M_contig820.2.1 vs. uniprot
Match: W7U6Y6_9STRA (Eukaryotic translation initiation factor 5A n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6Y6_9STRA)

HSP 1 Score: 225 bits (573), Expect = 5.670e-73
Identity = 108/155 (69.68%), Postives = 131/155 (84.52%), Query Frame = 0
Query:    7 LNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGAEIKNGFEDGKTLVVTVMAAMGHEQIVSYKEES 161
            + DYDF+GT AGAS   PSEAGQI+KGGYI+IKG PCKVVNVSTSKTGKHGHAKANFTA DIF GKK+EDV+P+THTT VP V R+EYQLLDI +DGF SLL E+G T+DDL+LP YP+GF  EI   ++DGK+L V+V++A G +QI++YKEE+
Sbjct:    9 IEDYDFSGTTAGASDVFPSEAGQIKKGGYIMIKGRPCKVVNVSTSKTGKHGHAKANFTAIDIFNGKKVEDVVPTTHTTYVPNVNRSEYQLLDI-EDGFVSLLQEDGGTRDDLKLPDYPEGFDQEILKAYQDGKSLSVSVLSACGIDQIIAYKEEA 162          
BLAST of mRNA_A-nodosum_M_contig820.2.1 vs. uniprot
Match: A0A5D6XTX1_9STRA (Eukaryotic translation initiation factor 5A n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTX1_9STRA)

HSP 1 Score: 222 bits (565), Expect = 8.480e-72
Identity = 107/153 (69.93%), Postives = 125/153 (81.70%), Query Frame = 0
Query:    9 DYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGAEIKNGFEDGKTLVVTVMAAMGHEQIVSYKEES 161
            DY F  TDAGAS T P EAGQIRKGG+I+IKGHPCKVV+VSTSKTGKHGHAK NFTA DIFT KKLED++PSTHTTSVP V R EY LLDISDD F +L+ + GDT+DD++LPT+PD F  EI+  F+ GK LVVTV+ A G EQI+S KE++
Sbjct:    5 DYTFESTDAGASDTYPCEAGQIRKGGFIMIKGHPCKVVSVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVARAEYTLLDISDDDFVTLMDDGGDTRDDIKLPTFPDNFADEIRADFDSGKQLVVTVLKACGIEQIISKKEDT 157          
BLAST of mRNA_A-nodosum_M_contig820.2.1 vs. uniprot
Match: A0A6A3TKK1_9STRA (Eukaryotic translation initiation factor 5A n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TKK1_9STRA)

HSP 1 Score: 221 bits (563), Expect = 3.310e-71
Identity = 104/159 (65.41%), Postives = 130/159 (81.76%), Query Frame = 0
Query:    4 EDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGAEIKNGFEDGKTLVVTVMAAMGHEQIVSYKEESG 162
            E + +D++F  TDAGAS T PSEAGQIRKGG+I+IKGHPCKVVNVSTSKTGKHGHAK NFTA DIFT KK ED++PSTHTTSVP V R EY LLDI+DD F SL+ + G+T++D++LPT+P+ F  EI+  F+DGK LV+TV+ A G EQ+++ KE+ G
Sbjct:   20 EHEEHDFEFHSTDAGASETYPSEAGQIRKGGFIMIKGHPCKVVNVSTSKTGKHGHAKCNFTALDIFTNKKYEDIVPSTHTTSVPFVSRAEYTLLDITDDDFVSLMDDSGETREDIKLPTFPETFADEIRADFDDGKQLVLTVLKACGTEQVIAKKEDLG 178          
BLAST of mRNA_A-nodosum_M_contig820.2.1 vs. uniprot
Match: K3WUI8_GLOUD (Eukaryotic translation initiation factor 5A n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUI8_GLOUD)

HSP 1 Score: 220 bits (560), Expect = 4.890e-71
Identity = 103/154 (66.88%), Postives = 127/154 (82.47%), Query Frame = 0
Query:    8 NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGAEIKNGFEDGKTLVVTVMAAMGHEQIVSYKEES 161
            +DY F  TDAGAS T P EAGQIRKGG+I+IKGHPCKVV+VSTSKTGKHGHAK NFTA DIFT KKLED++PSTHTTSVP V R+EY LLDI+DD F SL+ + G+T++D++LPT+PD F  EI+  F+ GK LV+TV+ A G EQ++S KE++
Sbjct:    3 DDYTFESTDAGASDTFPCEAGQIRKGGFIMIKGHPCKVVSVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVSRSEYTLLDITDDDFLSLMDDSGETREDIKLPTFPDNFAEEIRADFDAGKQLVLTVLKACGTEQVISKKEDT 156          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig820.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBS0_ECTSI3.130e-10693.83eIF-5a domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KDL5_9PHAE1.000e-10594.44eIF-5a domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z7R2_9STRA1.760e-8271.88Eukaryotic translation initiation factor 5A n=2 Ta... [more]
A0A7S2UU65_9STRA3.050e-7570.51Eukaryotic translation initiation factor 5A n=1 Ta... [more]
A0A8K1CGM3_PYTOL1.540e-7470.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4B4L4_HYAAE5.300e-7367.50Eukaryotic translation initiation factor 5A n=18 T... [more]
W7U6Y6_9STRA5.670e-7369.68Eukaryotic translation initiation factor 5A n=2 Ta... [more]
A0A5D6XTX1_9STRA8.480e-7269.93Eukaryotic translation initiation factor 5A n=1 Ta... [more]
A0A6A3TKK1_9STRA3.310e-7165.41Eukaryotic translation initiation factor 5A n=3 Ta... [more]
K3WUI8_GLOUD4.890e-7166.88Eukaryotic translation initiation factor 5A n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020189Translation elongation factor, IF5A C-terminalSMARTSM01376eIF_5a_2coord: 88..158
e-value: 8.7E-33
score: 124.9
IPR020189Translation elongation factor, IF5A C-terminalPFAMPF01287eIF-5acoord: 88..158
e-value: 8.1E-27
score: 93.1
IPR001884Translation elongation factor IF5A-likeTIGRFAMTIGR00037TIGR00037coord: 22..157
e-value: 3.9E-40
score: 134.7
IPR001884Translation elongation factor IF5A-likePIRSFPIRSF003025Transl_init_eIF5Acoord: 1..162
e-value: 6.9E-61
score: 202.3
IPR001884Translation elongation factor IF5A-likePANTHERPTHR11673TRANSLATION INITIATION FACTOR 5A FAMILY MEMBERcoord: 12..162
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 5..87
e-value: 2.3E-35
score: 122.3
IPR013185Translation elongation factor, KOW-likePFAMPF08207EFP_Ncoord: 27..79
e-value: 3.1E-5
score: 23.9
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 89..161
e-value: 5.8E-29
score: 102.0
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 89..159
NoneNo IPR availablePANTHERPTHR11673:SF42BNAA07G09420D PROTEINcoord: 12..162
NoneNo IPR availableCDDcd04468S1_eIF5Acoord: 89..159
e-value: 1.50443E-30
score: 103.771
IPR019769Translation elongation factor, IF5A, hypusine sitePROSITEPS00302IF5A_HYPUSINEcoord: 53..60
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 18..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig820contigA-nodosum_M_contig820:53935..56197 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig820.2.1mRNA_A-nodosum_M_contig820.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig820 53932..56837 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig820.2.1 ID=prot_A-nodosum_M_contig820.2.1|Name=mRNA_A-nodosum_M_contig820.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=163bp
MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVST
SKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDIS
DDGFCSLLTEEGDTKDDLQLPTYPDGFGAEIKNGFEDGKTLVVTVMAAMG
HEQIVSYKEESG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020189Transl_elong_IF5A_C
IPR001884IF5A-like
IPR014722Rib_L2_dom2
IPR013185Transl_elong_KOW-like
IPR012340NA-bd_OB-fold
IPR019769Trans_elong_IF5A_hypusine_site
IPR008991Translation_prot_SH3-like_sf