prot_A-nodosum_M_contig8197.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8197.1.1
Unique Nameprot_A-nodosum_M_contig8197.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length136
Homology
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BLAST of mRNA_A-nodosum_M_contig8197.1.1 vs. uniprot
Match: D8LQV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQV1_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 1.320e-53
Identity = 95/137 (69.34%), Postives = 110/137 (80.29%), Query Frame = 0 
Query:    1 MAGETEDSSSLLGISIMAFAEIVGSVLVLWRWRRAGTAPAGARGGAS-RQAEQLQEDAKCSFCVGLISLAVGGCLVLERLWWWADSVTGICLAVYIMREGVHSMWEAREQFVAHLDGDEGLRLVGITNREFPREGEE 136
            +AGE EDSSSLLGISIMAFAEIVGS+LVLWRWR+        RGGAS R++EQLQEDAKCS CVGLISLAV   LVLERL  WADS TGICL++YI+ EG+ S+WEAR+QFVAHL+GDEGLRLV + +     + EE
Sbjct:   57 IAGEDEDSSSLLGISIMAFAEIVGSLLVLWRWRKG---MGNDRGGASHRKSEQLQEDAKCSLCVGLISLAVVAALVLERLVSWADSATGICLSLYIVYEGLMSVWEARQQFVAHLEGDEGLRLVPLMHERLLLDKEE 190
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BLAST of mRNA_A-nodosum_M_contig8197.1.1 vs. uniprot
Match: A0A7S2G252_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G252_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 2.540e-6
Identity = 28/79 (35.44%), Postives = 44/79 (55.70%), Query Frame = 0 
Query:   56 DAKCSFCVGLISLAVGGCLVLERLWWWADSVTGICLAVYIMREGVHSMWEAREQF-VAHLDGDEGLRLVGITNREFPRE 133
            DA+CS+CV +ISLA    L  + ++ WAD V G+ +A+Y M++G   + E+ E+  +     DE   L+    R  P E
Sbjct:    2 DARCSYCVAVISLAALVALAADGVFNWADGVMGLVVAIYTMQQGYFQIRESNEKLNMRQALADEKAHLLKRPTRGVPEE 80
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8197.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQV1_ECTSI1.320e-5369.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2G252_9STRA2.540e-635.44Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027469Cation efflux transmembrane domain superfamilyGENE3D1.20.1510.10Cation efflux protein transmembrane domaincoord: 1..110
e-value: 1.7E-6
score: 29.8
IPR027469Cation efflux transmembrane domain superfamilySUPERFAMILY161111Cation efflux protein transmembrane domain-likecoord: 11..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8197contigA-nodosum_M_contig8197:20256..26405 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8197.1.1mRNA_A-nodosum_M_contig8197.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8197 20113..26405 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8197.1.1 ID=prot_A-nodosum_M_contig8197.1.1|Name=mRNA_A-nodosum_M_contig8197.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=136bp
MAGETEDSSSLLGISIMAFAEIVGSVLVLWRWRRAGTAPAGARGGASRQA
EQLQEDAKCSFCVGLISLAVGGCLVLERLWWWADSVTGICLAVYIMREGV
HSMWEAREQFVAHLDGDEGLRLVGITNREFPREGEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027469Cation_efflux_TMD_sf