prot_A-nodosum_M_contig8.83.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8.83.2
Unique Nameprot_A-nodosum_M_contig8.83.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length908
Homology
BLAST of mRNA_A-nodosum_M_contig8.83.2 vs. uniprot
Match: A0A6H5L5Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y8_9PHAE)

HSP 1 Score: 989 bits (2557), Expect = 0.000e+0
Identity = 539/932 (57.83%), Postives = 645/932 (69.21%), Query Frame = 0
Query:    1 MPRLRRSTS----ASRDPVRQIEEGRKLERSRSANLNN----RPC-RRSLRRYWKALVVGCGCLTVVFLSVPRGTQNHVSNGVKNKVKRLFGPP----VTCPPDDEWLQLPEGIKIDVHVVARGNTENLRTTLRSLTSACYPEDTKLELYVWALPEHARDVLSAQDGFVWTRGNFHPRMLTTEHENVPPLEGWARMWTDPLEDEVRLVLPEGLEVSKLFYFWLTGTLRKYMGEETSVEELNIFRENVFGISLSATGLCEVSGRPMSWEAYEAADGKLPIFHTLPGSRGTAFFGWQWRSFKNFMDARARVLDADSWEGEPLLHASAVQ---SWAGSLERFLGEYSHGRGLGVLHPNLDGAMSFARQSSTRTIALPGYHEHEHDPHGKDRREDDTQAVA-SEGAGTPQPTITGTVETE--RATERLVRSYKDVS--MDKYPPVSAVPAYDVMFRRHPDLSHLRLLAYRFMQRLQTAQNRNAELEACWRRPENEQPVYSELKYLIYQPQFGMGNQLRALESGLAVARVLGRMLVVPDYIADNGEGIPVRYDAIWEFGFLEELVGRHNVILQADFDALIRQKEVVDPPKQLYLAAMPIKQLTGNDDYFERMGWGELPQVPLPLANATEAGWRELQEVEDQVLAVTAMFGMFQGWTEDSLIGDQYWHDMVKLHVSEEATWLHDLVDDSITRFTEKAKVAGGEILGQAEAEESEGEVTSDRRVSG------SETQFMCAHVRRQDFQASCVRYEEEYRSASSRPWVTGALANGGLCWVEEADFRKTVDIFLKQAPTQLGVKPQFVFSTSDDQKFLEATKYGNSVPVFTLTDLPHPQDLKVLVGRDESDMNAEN-----DASADSARGKCITPEEVRAALPAIDVAVCSRAALLLLNSFSTYSALIKAKAKAQPNFVRGLYWAEPPALWNWKTGLLAWF 900
            M RLRR+TS    +S+ P RQ+  G++LER  S+NLN+    RP  RR LRR W+  V  C C +V  LSVPR   +H    V+     +F P      +C  + +W +LP G+ ID+HVVARGNT NLRTTL SL  ACYPED +L L+VWAL  HAR+V+ AQDGFVWT G +    LTT+H  VPPLEGWARMWTDP++ EVRLVLPEGLE+S LFYFWL  TL +Y+G   ++EE  IFRENVFG+SLSATGL EVSG P SW AYEAAD K P+FHTLPG+RGTAFFGW+                    EGE L+H    +   SWAGSLERFL E+ HGRGLG+LHPNL+G +SFARQ                            +A+  S+ A TP PT+ GT +    R  E LV +Y+D +  + KYP VS+VPAYD++ RRH D++HLRL AYRF QRL+T+  RN +LE  W+RP   +P Y+  K+LIYQPQFGMGNQLRAL++ LAVARVLGR+LVVPDYIADNGEG  VRYDAIWEFGFLEELVGR NVILQADFD L++  +VV PP ++YLA MPIKQL GND+YF RMGWGELP+VPLPLANATEAGW ELQ++EDQVLA++AMFGMFQGWT DS +GD +WH MVKLHVSEEA+W+H+ VDDS+ RF EKA     E    AE  +S GE   D  +S       +  +FMCAHVRRQDF+ SC  YEEEYR+ S+R WV  AL  GG+CWVEE DFR TVD+ L+ AP +L V PQFVF+TSDD +FLE  K GN+VPVFTL D+                   E      ++SA +A GK +TPEEV+AALPAIDVAVCSR  LL+LN FSTYSALIK KAKAQPNF RGLYWA+PPAL    +    WF
Sbjct:    1 MQRLRRTTSTSSTSSQPPARQLS-GKRLERRGSSNLNSATSSRPTWRRRLRRNWRGAVFVCVCASVALLSVPR---DHRQQPVRKS--SIFKPSHRQRESCRDEIDWPELPHGVDIDLHVVARGNTHNLRTTLTSLAEACYPEDAELALHVWALTAHAREVMPAQDGFVWTHGTYQFHTLTTKHGEVPPLEGWARMWTDPIDTEVRLVLPEGLELSNLFYFWLASTLARYLGAGVTMEEREIFRENVFGLSLSATGLSEVSGVPSSWGAYEAADKKRPVFHTLPGARGTAFFGWK--------------------EGEALVHVPGGEVALSWAGSLERFLAEFCHGRGLGILHPNLNGDVSFARQLPPXXXXXXXXX-----XXXXXXXXXXXEALPLSQTAHTPTPTLRGTDDGGGGREPEGLVLTYRDANNLIVKYPSVSSVPAYDLLSRRHRDVTHLRLQAYRFFQRLRTSVERNKDLEDLWKRPGMPKPNYALAKFLIYQPQFGMGNQLRALDAALAVARVLGRVLVVPDYIADNGEGRSVRYDAIWEFGFLEELVGRSNVILQADFDDLLQDCDVVLPPTKVYLADMPIKQLAGNDEYFGRMGWGELPKVPLPLANATEAGWSELQQMEDQVLAISAMFGMFQGWTPDSTVGDTHWHAMVKLHVSEEASWVHEFVDDSLERFREKAT----EAAAAAEQADSGGE-GGDEELSDVGGRNPAAAEFMCAHVRRQDFEESCSCYEEEYRTGSARDWVKEALDGGGVCWVEEQDFRDTVDVLLRWAPAKLDVSPQFVFATSDDARFLEDIKVGNAVPVFTLDDVSRVAAAXXXXXXXXXXXAGEGFRGPAESSAATAGGKAVTPEEVQAALPAIDVAVCSRGTLLMLNYFSTYSALIKTKAKAQPNFKRGLYWADPPALSTRWSRFCGWF 896          
BLAST of mRNA_A-nodosum_M_contig8.83.2 vs. uniprot
Match: D8LE24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE24_ECTSI)

HSP 1 Score: 711 bits (1835), Expect = 1.100e-241
Identity = 418/877 (47.66%), Postives = 499/877 (56.90%), Query Frame = 0
Query:  126 ACYPEDTKLELYVWALPEHARDVLSAQDGFVWTRGNFHPRMLTTEHENVPPLEGWARMWTDPLEDEVRLVLPEGLEVSKLFYFWLTGTLRKYMGEETSVEELNIFRENVFGISLSATGLCEVSGRPMSWEAYEAADGKLPIFHTLPGSRGTAFFGWQ------------------------------------WRSFKNFMDARARVLDADSWEG-EPLLHASAVQ---SWAGSLERFLGEYSHGRGLGVLHPNLDGAMSFARQSSTRTIALPGYHEHEHDPHGKDRREDDTQAVASEGAGTPQPTITGTVETE---RATERLVRSYKDVSMDKYPPVSAVPAYDVMFRRHPDLSHLRLLAYRFMQRLQTAQNRNAELEACWRRPENEQPVYSELKYLIYQPQF--GMGNQLRALESGLAVARVLGRMLVVPDYIADNGEGIPVRYDAIWEFGFLEELVGRHNVILQADFDALIRQKEVVDPPKQLYLAAMPIKQLTGNDDYFERMGWGELPQVPLPLANATEAGWRELQEVEDQVLAVTAMFGMFQGWTED----------------------------------SLIGDQYWHDMVKLHVSEEATWLHDLVDDSITRFTEKAKVAGGEILGQAEAEESEGEVTSD---RRVSGSETQFMCAHVRRQDFQASCVRYEEEYRSASSRPWVTGALANGGLCWVEEADFRKTVDIFLKQAPTQLGVKPQFVFSTSDDQKFLEATKYGNSVPVFTLTDLPHPQDLKVLVGRDESDMNAENDASADSARGK--------------------CITPEEVRAALPAIDVAVCSRAALLLLNSFSTYSALIKAKAKAQPNFVRGLYWAEPPALWNWKTGLLAWF 900
            ACYPE  +L L+VWAL  HAR+V+ AQDGFVWT G +    LTT+H  VPPLEGWARMWTDP++ EVRLVLPEGLE+S LFYFWL+ TL +Y+G E ++EE  IFR+NVFG+SLSATGL EVSG+P SW AYEAAD K P+FHTLPG+RGTAFFGW+                                    W  F  FMDARARVL++DSWEG E L H    +   SWAGSLERFL E+ HGRGLG+LHPNL+G +SFARQ                              + S+ A TP PT+ GT +     R  E LV +Y+D +      + A  A  V                                           P+   L  +  + Q   G+  + R  E+ L   ++ GR               PVRYDAIWEFGFLEELVGR+NVILQADF  L++  +VV PP ++YLA MPIKQL GND+YF RMGWGELP+VPLPLANATEAGW ELQ++EDQVLAV+AMFGMFQ                                       S +GD +WH MVKLHVSEEA+W+H+ VD S+ RF EKA  A           E   E  SD   R  + +E  FMCAHVRRQDF+ SC  YEEEYR+ S+R WV  AL  GG+CWVEE +FR TVD+ L++AP +L V PQFVF+TSDD +FLE  K GN+VPVFTL D          V R  +      +  A +  G                      +TPEEV AALPAIDVAVCSR  LL+LN FSTYSALIK KAKAQPNF RGLYWA+PPAL    +    WF
Sbjct:   85 ACYPEGAELALHVWALTAHAREVMPAQDGFVWTHGTYQFHTLTTKHGEVPPLEGWARMWTDPIDTEVRLVLPEGLELSSLFYFWLSSTLARYLGAEVTMEEREIFRDNVFGLSLSATGLSEVSGKPSSWGAYEAADKKRPVFHTLPGARGTAFFGWKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGDFSAFMDARARVLESDSWEGGEALAHVPGGEVALSWAGSLERFLAEFCHGRGLGILHPNLNGDVSFARQLPPXXXXXXXXXXXXXXXXXXXXX---XTPLLSQTAHTPTPTLRGTADDGGGGREPEGLVLTYRDANNLVTSGLDAPAAPGV-------------------------------------------PILPTLASVGREEQGPRGLVEKARGAEAELRARQIPGR---------------PVRYDAIWEFGFLEELVGRNNVILQADFYDLLQDCDVVRPPTKVYLADMPIKQLAGNDEYFGRMGWGELPKVPLPLANATEAGWSELQQMEDQVLAVSAMFGMFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVGDTHWHAMVKLHVSEEASWVHEFVDGSLERFREKATEAAAAAEQADPGGEGGDEELSDAGGRNPAAAE--FMCAHVRRQDFKESCSCYEEEYRTGSARDWVKEALDGGGVCWVEEHNFRDTVDVLLRRAPAKLDVSPQFVFATSDDARFLEDVKVGNAVPVFTLED----------VSRAAAAARGGGEEGAAAXXGXXXXXXXXXXXXXXXXXXXXXAVTPEEVEAALPAIDVAVCSRGTLLMLNYFSTYSALIKTKAKAQPNFKRGLYWADPPALSTGWSRFCDWF 888          
BLAST of mRNA_A-nodosum_M_contig8.83.2 vs. uniprot
Match: A0A4P9YSI8_ROZAC (Uncharacterized protein n=2 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YSI8_ROZAC)

HSP 1 Score: 104 bits (259), Expect = 3.770e-19
Identity = 104/435 (23.91%), Postives = 177/435 (40.69%), Query Frame = 0
Query:  115 NLRTTLRSLTSACYPEDTKLELYVWALPEHARDVLSAQDGFVWTRGNFHPRMLTTEHENVPPLEGWARMWTDPLEDEVRLVLPEGLEVSKLFYFWLTGTLRKYMGEETSVEELNIFREN------VFGISLSATGLCEVSGRPMSWEAYEAADGKLPIFHTLPGSRGTAFFGWQWRSFKNFMDARARVLDADSWEGEPLLHASAVQSWAGSLERFLGEYSHGRGLGVLHPNLDGAMSFARQSSTRTIALPGYHEHEHDPHGKDRREDDTQAVASEGAGTPQPTITGTVETERATERLVRSYKDVSM--------DKYPPVSAVPAYDVMFRRHPDLSHLRLLAYRFMQRLQTAQNRNAEL-------------EAC----WRRPENEQPVYSELKYLIYQPQFGMGNQLRALESGLAVARVLGRMLVVPDYIADN 518
            +L+  L SLT+A Y    K+++ +    +   +V++  D F W  G+   R + T+   +  +   A  W+   +DE  + L + +EVSK ++ ++   + +Y           +FREN      + GISL      E+   P+ W   +           +P S G  +F   WR FK + D R   +    +    +   +   +W  S +R L + S+ RG  +++PN    +SF+              + EH                S+GA     T + T+  ++     V  ++D S         D   P+  +  +D+  R+ P + HL       +++L        EL               C    +   E E+PV  E KY+I+QPQ G  NQLRA E  +A A +L R LV+P   + N
Sbjct:   97 SLQRLLTSLTNALY-FGVKVDIQINVDGDAGEEVIALVDSFKWPHGDTI-RNIRTDRLGLEKMIMSA--WSPASDDEYAIFLEDDIEVSKYYFGFILMNINRY-----------VFRENADVLSKMMGISLYTPRWNEIVHPPLKWIPSDIVQNSTLFMFQIPCSWGAVYFPKVWREFKEYYDWRTSEVAVRKFGSRIIAPNAHSNTWRRSWKRHLIDLSYARGWFMIYPNFPDQLSFSTNHREPGKLSKAIQKGEH--------------TGSKGAA--GKTSSFTLTKKKLWVYTVSLHEDDSFLKSRKFWNDLNKPIKDLDVFDIYHRKVPSVVHLFETGLGALEQLYHTNRNTKELFKRFYGINTVDGNNHCVLDLFGSLEREEPVSDE-KYIIFQPQLGFNNQLRAYEDAIAYAHILKRTLVLPPVQSTN 499          
BLAST of mRNA_A-nodosum_M_contig8.83.2 vs. uniprot
Match: A0A7S4HNA9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HNA9_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 4.640e-12
Identity = 112/438 (25.57%), Postives = 172/438 (39.27%), Query Frame = 0
Query:  105 VHVVARGNTENLRTTLRSLTSACYPEDT-KLELYV-WALPEHARDVLSAQDGFVWTRGNFHPRMLTTEHENVPPLEGWARMWTDPLEDEV---RLVLPEGLEVSKLFYFWLTGTL--RKYMGEETSVEELNIFRENVFGISLSATGLCEVSGRPMSWEAYEAADGKLPIFHTLPGSRGTAFFGWQWRSF-KNFMDARARVLDADSWEGEPLLHASAVQSWAGSLERFLGEYSHGRGLGVLHPNLDGAMSFARQSSTRTIALPGYHEHEHDPHGKDRREDDTQAVASEGAGTPQPTITGTVETERATERLV--RSYKDVSMDKYPPVSAVPAYDVMFRRHPDLSHLRLLAYRFMQRL-QTAQNRNAE------------LEACWRRPENEQPVYSELKYLIYQPQFGMGNQLRALESGLAVARVLGRMLVVPDYIADNG 519
            + V A     +L   LRSL+ A Y  D+  +E Y+    P+   D +     F W+ G   P  +    E V  ++     W DP EDE     ++L + +EVS  FY++    L   KY  ++  +  L+ +      I     G    +  P+                 LP S G  +F W WR F K F + R         +  PL   +   SW  S +R+  EY   RGL +L+PN     S A  ++ R +   G H   +   G+D+                   +T   + ER  + LV  RS  D  + K+     +   DV+   H   S   +  Y  +      + N   E            L+   +R     P  S  KY +Y PQ G+ NQ+  L+  + +A+ LGR LVVP  +AD+G
Sbjct:  174 IKVFAYKRRASLDRLLRSLSVANYMGDSVPIEFYIEGGAPQIVVDYIH---NFRWSHGP--PPRINLRKERVGLMDNIVESW-DPPEDEACEFAILLEDDIEVSPHFYYYAKSLLVNSKY-ADDADLVGLSFYTPKWNEIKYPNVGFKVPTSDPL-------------FLMQLPCSWGAVYFPWHWREFRKYFAERRNFEKGVGGIDVPPLPEGARSNSWERSWKRYYIEYMFYRGLLMLYPNFQKEKSLA--TTHREL---GEHTGPNLNKGRDK-------------------LTKAKDWERYIQSLVAFRSELDKQL-KFSDPPRLKEMDVVNLYHRPASREEIKRYATITSFGNISSNTRREYLDKVHGEGFCALDVSGQRV----PQSSGKKYFLYDPQNGLSNQIMQLQGAVVMAQQLGRTLVVPPVVADDG 562          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8.83.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L5Y8_9PHAE0.000e+057.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE24_ECTSI1.100e-24147.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4P9YSI8_ROZAC3.770e-1923.91Uncharacterized protein n=2 Tax=Rozella allomycis ... [more]
A0A7S4HNA9_9STRA4.640e-1225.57Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 694..887
e-value: 4.5E-7
score: 31.7
NoneNo IPR availableGENE3D3.40.50.11340coord: 473..578
e-value: 1.6E-5
score: 26.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 355..397
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 358..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 382..397
NoneNo IPR availablePANTHERPTHR33604OSJNBA0004B13.7 PROTEINcoord: 79..376
IPR019378GDP-fucose protein O-fucosyltransferasePFAMPF10250O-FucTcoord: 479..870
e-value: 5.2E-11
score: 42.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8contigA-nodosum_M_contig8:1272424..1306052 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8.83.2mRNA_A-nodosum_M_contig8.83.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8 1271743..1306239 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8.83.2 ID=prot_A-nodosum_M_contig8.83.2|Name=mRNA_A-nodosum_M_contig8.83.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=908bp
MPRLRRSTSASRDPVRQIEEGRKLERSRSANLNNRPCRRSLRRYWKALVV
GCGCLTVVFLSVPRGTQNHVSNGVKNKVKRLFGPPVTCPPDDEWLQLPEG
IKIDVHVVARGNTENLRTTLRSLTSACYPEDTKLELYVWALPEHARDVLS
AQDGFVWTRGNFHPRMLTTEHENVPPLEGWARMWTDPLEDEVRLVLPEGL
EVSKLFYFWLTGTLRKYMGEETSVEELNIFRENVFGISLSATGLCEVSGR
PMSWEAYEAADGKLPIFHTLPGSRGTAFFGWQWRSFKNFMDARARVLDAD
SWEGEPLLHASAVQSWAGSLERFLGEYSHGRGLGVLHPNLDGAMSFARQS
STRTIALPGYHEHEHDPHGKDRREDDTQAVASEGAGTPQPTITGTVETER
ATERLVRSYKDVSMDKYPPVSAVPAYDVMFRRHPDLSHLRLLAYRFMQRL
QTAQNRNAELEACWRRPENEQPVYSELKYLIYQPQFGMGNQLRALESGLA
VARVLGRMLVVPDYIADNGEGIPVRYDAIWEFGFLEELVGRHNVILQADF
DALIRQKEVVDPPKQLYLAAMPIKQLTGNDDYFERMGWGELPQVPLPLAN
ATEAGWRELQEVEDQVLAVTAMFGMFQGWTEDSLIGDQYWHDMVKLHVSE
EATWLHDLVDDSITRFTEKAKVAGGEILGQAEAEESEGEVTSDRRVSGSE
TQFMCAHVRRQDFQASCVRYEEEYRSASSRPWVTGALANGGLCWVEEADF
RKTVDIFLKQAPTQLGVKPQFVFSTSDDQKFLEATKYGNSVPVFTLTDLP
HPQDLKVLVGRDESDMNAENDASADSARGKCITPEEVRAALPAIDVAVCS
RAALLLLNSFSTYSALIKAKAKAQPNFVRGLYWAEPPALWNWKTGLLAWF
HGLFGKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019378GDP-Fuc_O-FucTrfase