prot_A-nodosum_M_contig8.7.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8.7.1
Unique Nameprot_A-nodosum_M_contig8.7.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length61
Homology
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BLAST of mRNA_A-nodosum_M_contig8.7.1 vs. uniprot
Match: D7G6N9_ECTSI (Myosin 29 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6N9_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 1.620e-13
Identity = 38/58 (65.52%), Postives = 46/58 (79.31%), Query Frame = 0 
Query:    1 MPKDAILLKYEDGDGDHIVFTGDDNLHEAVDMARLSNAPALKLMASRKLPTLPEDTND 58
            MPKDAILLKY+D DGD IV +GDD+L EAVDMAR S+ PAL L+A+ KL TL E  ++
Sbjct: 3070 MPKDAILLKYQDDDGDDIVLSGDDSLLEAVDMARASSKPALVLVATLKLHTLDEHDDE 3127
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BLAST of mRNA_A-nodosum_M_contig8.7.1 vs. uniprot
Match: A0A6H5K5J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5J8_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 3.660e-12
Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 0 
Query:    1 MPKDAILLKYEDGDGDHIVFTGDDNLHEAVDMARLSNAPALKLMASRKLPTLPEDTND 58
            MPKDAILLKY+D DGD IV +GDD+L EAVDMAR S+  AL L+A+ KL TL E  ++
Sbjct: 1197 MPKDAILLKYQDDDGDDIVLSGDDSLLEAVDMARASSKLALVLVATLKLHTLDEHDDE 1254
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6N9_ECTSI1.620e-1365.52Myosin 29 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5K5J8_9PHAE3.660e-1263.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000270PB1 domainPFAMPF00564PB1coord: 5..36
e-value: 3.6E-6
score: 26.8
NoneNo IPR availableGENE3D3.10.20.90coord: 2..46
e-value: 3.5E-6
score: 28.5
NoneNo IPR availableSUPERFAMILY54277CAD & PB1 domainscoord: 4..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8contigA-nodosum_M_contig8:9761..10259 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8.7.1mRNA_A-nodosum_M_contig8.7.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8 9304..10259 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8.7.1 ID=prot_A-nodosum_M_contig8.7.1|Name=mRNA_A-nodosum_M_contig8.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=61bp
MPKDAILLKYEDGDGDHIVFTGDDNLHEAVDMARLSNAPALKLMASRKLP
TLPEDTNDASV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000270PB1_dom