prot_A-nodosum_M_contig8.29.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8.29.2
Unique Nameprot_A-nodosum_M_contig8.29.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length168
Homology
BLAST of mRNA_A-nodosum_M_contig8.29.2 vs. uniprot
Match: D8LE19_ECTSI (Rab28, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE19_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 1.000e-92
Identity = 134/167 (80.24%), Postives = 148/167 (88.62%), Query Frame = 0
Query:    1 MQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVNACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDESVNGGEVPEYTSSSHTINTRNCILS 167
            MQIWDIGGQSIGSKMMSKYI GAHAV+MCYDITNYDSFQ+LDDWYR+VVK F  G MPYVAMVGNKCDLSHMRAVRT+SAHQFADDN MYTFFMSAKSGDQV+ACFHRIAGHLSGIA +R QLDAAG V++A+IVN+RRHDE V+GGE+P+YTS       + C LS
Sbjct:   80 MQIWDIGGQSIGSKMMSKYIFGAHAVIMCYDITNYDSFQDLDDWYRLVVKTFEKGVMPYVAMVGNKCDLSHMRAVRTTSAHQFADDNNMYTFFMSAKSGDQVDACFHRIAGHLSGIALSRPQLDAAGGVLSASIVNYRRHDEEVHGGELPDYTSRR----PKTCTLS 242          
BLAST of mRNA_A-nodosum_M_contig8.29.2 vs. uniprot
Match: A0A6H5JPJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ9_9PHAE)

HSP 1 Score: 270 bits (690), Expect = 2.120e-88
Identity = 132/176 (75.00%), Postives = 148/176 (84.09%), Query Frame = 0
Query:    1 MQIWDIGGQSIGSKMMSKYICGAH---------AVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVNACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDESVNGGEVPEYTSSSHTINTRNCILS 167
            MQ+WDIGGQSIGSKMMSKYI GAH         AV+MCYDITNYDSFQNLDDWYR+VVK F  G MPYVAMVGNKCDLSHMRAVRT+SAH+FADDN MYTFFMSAKSGDQV+ACFHRIAGHLSG+A +R QLDAAG V++A+IVN+RRHDE V+GGE+P+YTS       + C LS
Sbjct:  151 MQVWDIGGQSIGSKMMSKYIFGAHVRSGGTGLIAVIMCYDITNYDSFQNLDDWYRLVVKTFEKGVMPYVAMVGNKCDLSHMRAVRTTSAHRFADDNNMYTFFMSAKSGDQVDACFHRIAGHLSGVALSRPQLDAAGGVLSASIVNYRRHDEEVHGGELPDYTSRR----PKTCTLS 322          
BLAST of mRNA_A-nodosum_M_contig8.29.2 vs. uniprot
Match: A0A7S3M8N4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8N4_9STRA)

HSP 1 Score: 196 bits (497), Expect = 3.800e-60
Identity = 92/166 (55.42%), Postives = 122/166 (73.49%), Query Frame = 0
Query:    2 QIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVNACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDESVNGGEVPEYTSSSHTINTRNCILS 167
            QIWDIGGQSIGSKM++ YI GA AV++CYDITNY+SF NL+DWYRIV++ F    MPYVA++GNK DL H+ AVR    ++FA++N + +F MSAK+GDQV   F +IA  L+ + + + +  +   VV A I++H+RHDESVN G+VPEYT      NT NCI+S
Sbjct:   87 QIWDIGGQSIGSKMITNYIAGADAVLLCYDITNYESFANLEDWYRIVLRTFYQAKMPYVALLGNKNDLKHLTAVRAVQHNKFAEENGLASFMMSAKNGDQVTQAFWKIASTLANVPYQKFEQQSQAIVVPATIIDHKRHDESVNRGKVPEYTKK----NTTNCIIS 248          
BLAST of mRNA_A-nodosum_M_contig8.29.2 vs. uniprot
Match: A0A835YXE0_9STRA (Rab28, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE0_9STRA)

HSP 1 Score: 194 bits (493), Expect = 9.400e-60
Identity = 94/170 (55.29%), Postives = 128/170 (75.29%), Query Frame = 0
Query:    1 MQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVNACFHRIAGHLSGIAFTRS---QLDAAGRVVTANIVNHRRHDESVNGGEVPEYTSSSHTINTRNCILS 167
            +Q+WDIGGQSIGSKM+  YI G+HAV+ CYD+TN DSF +L+DW  +V+K+ A+ + P +A+ GNKCDLSH+RAVR+ + + FAD + M  +FMSAKSGDQVNACFHR+A  L+ ++ +++   +LD A  VVTA IVNH RHD +VN GEVPE+T +      R+C +S
Sbjct:   69 LQLWDIGGQSIGSKMLGNYIHGSHAVIFCYDVTNADSFLDLEDWRSLVMKS-AADDKPVMALAGNKCDLSHIRAVRSEAINTFADKHDMQVYFMSAKSGDQVNACFHRLAAQLAEVSLSKADLQRLDGAENVVTAEIVNHPRHDPNVNKGEVPEFTKTG-----RSCSVS 232          
BLAST of mRNA_A-nodosum_M_contig8.29.2 vs. uniprot
Match: A0A7S2FC38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FC38_9STRA)

HSP 1 Score: 186 bits (473), Expect = 8.670e-58
Identity = 89/150 (59.33%), Postives = 115/150 (76.67%), Query Frame = 0
Query:    8 GQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAF--ASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVNACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDESVNGGEVPEYTSS 155
            GQSIGSKM+  YI G+HAV+ CYDITNYDSF NL+DWYR V   +  ASG MP +A++GNK DLSHMRAVR    ++FAD+N M+++ +SAK+GDQVNACF RIA  L+G+  T+ +L+   +VV A I++H++HD  VNGGEVPEY  S
Sbjct:    1 GQSIGSKMLPNYIHGSHAVLFCYDITNYDSFANLEDWYRKVHGTYSKASGPMPCMALLGNKIDLSHMRAVRHDHHNRFADENQMHSYMLSAKNGDQVNACFFRIAAQLAGVKITKPELEVQTKVVQAAIIDHQQHDAKVNGGEVPEYKKS 150          
BLAST of mRNA_A-nodosum_M_contig8.29.2 vs. uniprot
Match: A0A7S0HTS2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HTS2_9EUKA)

HSP 1 Score: 187 bits (474), Expect = 7.790e-57
Identity = 81/142 (57.04%), Postives = 110/142 (77.46%), Query Frame = 0
Query:    1 MQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVNACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDE 142
            +QIWDIGGQ+IG KM+  YI GA AV++CYDITNY SFQNL+DW+R+V + F    MPYV +VGNK DL+HMRAV+     QFAD+N MY+F +SAK+GD V++CF+R+A  L+G+  T+ +L+ A ++V A IVNH +HD+
Sbjct:   76 LQIWDIGGQTIGGKMIGNYIYGAQAVLLCYDITNYQSFQNLEDWFRLVRRTFQGSAMPYVTLVGNKTDLNHMRAVKAEKHSQFADENDMYSFLLSAKTGDNVSSCFYRLAADLAGVVLTKPELEIASKIVRAEIVNHPQHDQ 217          
BLAST of mRNA_A-nodosum_M_contig8.29.2 vs. uniprot
Match: A0A7S0P625_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P625_9EUKA)

HSP 1 Score: 184 bits (468), Expect = 1.020e-55
Identity = 79/141 (56.03%), Postives = 112/141 (79.43%), Query Frame = 0
Query:    1 MQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVNACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHD 141
            +QIWDIGGQ+IG KM+S YI GA AV++CYDITNY++FQNL+DW+R+V + F+ GNMPYV + GNK DL+HMRAV+    +QFA++N M T FMSAK+GD V++CF+++A  L+G+  ++ +L+ A ++V A IVNH + D
Sbjct:   87 LQIWDIGGQTIGGKMISNYIYGAQAVLLCYDITNYETFQNLEDWFRLVRRTFSQGNMPYVVLAGNKTDLNHMRAVKLEKHNQFAEENEMITAFMSAKTGDAVSSCFYKVAADLAGVVLSKPELEVASKIVKAEIVNHPQED 227          
BLAST of mRNA_A-nodosum_M_contig8.29.2 vs. uniprot
Match: A0A8J5XV08_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XV08_DIALT)

HSP 1 Score: 183 bits (465), Expect = 1.450e-55
Identity = 81/150 (54.00%), Postives = 113/150 (75.33%), Query Frame = 0
Query:    1 MQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVNACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDESVNGGEVP 150
            +QIWDIGGQSIG KM+  YI GAHAV++CYDITNY SFQ+++DW R+V + FA+  MP VA+VGNK DL+HMR VR++  +QF D+N    FF+ AK+G+ VN CF ++A  L+G+A T+ ++++  +VVTA I+NH+RHD +  G   P
Sbjct:   72 LQIWDIGGQSIGGKMIGNYIYGAHAVLLCYDITNYQSFQDVEDWLRLVRRTFANETMPLVALVGNKVDLAHMRTVRSTKHNQFCDENDATPFFLCAKNGENVNTCFFKLAAMLAGVAVTKHEVESTTKVVTAEIINHQRHDPAEQGAAKP 221          
BLAST of mRNA_A-nodosum_M_contig8.29.2 vs. uniprot
Match: A0A7S1CBI3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBI3_9STRA)

HSP 1 Score: 182 bits (461), Expect = 9.190e-55
Identity = 81/144 (56.25%), Postives = 112/144 (77.78%), Query Frame = 0
Query:    1 MQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVNACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDESV 144
            +QIWDIGGQSIG KM+  YI GA AV++CYD+TNY SFQNL+DWYR+V +  A+  MPYVA+VGNK DL+HMRAV+    + F+D+N MY++FMSAK+GD V + F+RIA  L+G+  T+ +++   +VV A +VNH+R+D +V
Sbjct:   75 LQIWDIGGQSIGGKMIKNYIYGAQAVLLCYDVTNYASFQNLEDWYRLVQQTHAADAMPYVALVGNKTDLNHMRAVKLDKHNLFSDENDMYSYFMSAKTGDSVASSFYRIAADLAGVVLTKPEIEVESKVVKAELVNHQRNDPAV 218          
BLAST of mRNA_A-nodosum_M_contig8.29.2 vs. uniprot
Match: A0A2R5GAN9_9STRA (Ras-related protein Rab-28 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAN9_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.210e-53
Identity = 87/167 (52.10%), Postives = 114/167 (68.26%), Query Frame = 0
Query:    1 MQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVNACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDESVNGGEVPEYTSSSHTINTRNCILS 167
            +QIWDIGGQSIGSKM+S YI GA A+V+ YDITNY SF+NL+DW R+V K F+ G MP+VA+V NKCDL H+R V     + FAD+N  Y++ +SAKSGD V   FHR+A  L+G+  TR +   A +VV A I++H + D  VN    P Y S S +    +CI+S
Sbjct:  125 LQIWDIGGQSIGSKMISNYIYGADAIVLMYDITNYQSFRNLEDWMRLVRKVFSEGPMPHVALVANKCDLEHVRTVTKEKHNDFADENEFYSYSLSAKSGDNVRGTFHRLAADLAGVTLTRPEFQVAHQVVKAEIIDHEKDDPEVNA---PSYASGSKS----HCIIS 284          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8.29.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE19_ECTSI1.000e-9280.24Rab28, Ras superfamily GTPase n=1 Tax=Ectocarpus s... [more]
A0A6H5JPJ9_9PHAE2.120e-8875.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3M8N4_9STRA3.800e-6055.42Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A835YXE0_9STRA9.400e-6055.29Rab28, ras superfamily GTPase n=1 Tax=Tribonema mi... [more]
A0A7S2FC38_9STRA8.670e-5859.33Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S0HTS2_9EUKA7.790e-5757.04Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S0P625_9EUKA1.020e-5556.03Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A8J5XV08_DIALT1.450e-5554.00Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S1CBI3_9STRA9.190e-5556.25Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A2R5GAN9_9STRA1.210e-5352.10Ras-related protein Rab-28 n=1 Tax=Hondaea ferment... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 1..116
e-value: 0.0024
score: -57.0
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..116
e-value: 6.5E-9
score: 1.6
NoneNo IPR availablePANTHERPTHR24073:SF572RAS-RELATED PROTEIN RAB-28coord: 1..144
NoneNo IPR availablePANTHERPTHR24073DRAB5-RELATEDcoord: 1..144
NoneNo IPR availablePROSITEPS51419RABcoord: 1..164
score: 13.002837
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..142
e-value: 6.8E-30
score: 105.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..113
IPR001806Small GTPasePFAMPF00071Rascoord: 1..111
e-value: 5.9E-23
score: 81.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8contigA-nodosum_M_contig8:295468..296796 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8.29.2mRNA_A-nodosum_M_contig8.29.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8 294334..297422 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8.29.2 ID=prot_A-nodosum_M_contig8.29.2|Name=mRNA_A-nodosum_M_contig8.29.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=168bp
MQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVK
AFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGD
QVNACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDESVNGGEVP
EYTSSSHTINTRNCILS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001806Small_GTPase