prot_A-nodosum_M_contig12514.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig12514.1.1
Unique Nameprot_A-nodosum_M_contig12514.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length71
Homology
BLAST of mRNA_A-nodosum_M_contig12514.1.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.840e-26
Identity = 57/71 (80.28%), Postives = 64/71 (90.14%), Query Frame = 0
Query:    1 MARVARVLLSVPASAAVLERDFSTTGRLITGSRSRLAGEYVEMTLFLNGNKEYIPVEVPSLSESQIKEAVP 71
            MAR ARVLLSVPAS+AVLERDFST GRLITG+RSRL+  YVEM LFLNGN+EYIP+EVP LS+SQ +EAVP
Sbjct:  727 MARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQEYIPMEVPKLSKSQGQEAVP 797          
BLAST of mRNA_A-nodosum_M_contig12514.1.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 7.870e-15
Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    1 MARVARVLLSVPASAAVLERDFSTTGRLITGSRSRLAGEYVEMTLFLNGNKEYIPVEVPSLSESQIKEAVP 71
            +ARVARV+   PASAAVLERDFS  GR++T SRS +  +YVEM +FL+GN + IP ++  L+E+  +  +P
Sbjct:  621 LARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAAARTKIP 691          
BLAST of mRNA_A-nodosum_M_contig12514.1.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 2.860e-14
Identity = 37/72 (51.39%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    1 MARVARVLLSVPASAAVLERDFSTTGRLITGSRSRL-AGEYVEMTLFLNGNKEYIPVEVPSLSESQIKEAVP 71
            +ARVARV+   PASAAVLERDFS  GR++T SR  + +  YVEM LFL+GN + IP ++  L+E+  +  +P
Sbjct:    9 LARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKLTEAVARSKIP 80          
BLAST of mRNA_A-nodosum_M_contig12514.1.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 1.010e-12
Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 MARVARVLLSVPASAAVLERDFSTTGRLITGSRSRLAGEYVEMTLFLNGNKEYIPVEVPS 60
            +AR ARV+   PASAAVLE DF   GR++T SRS    +YVEM LFL+GN + IP ++P+
Sbjct:   51 LARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDIPA 110          
BLAST of mRNA_A-nodosum_M_contig12514.1.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 2.620e-11
Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0
Query:    1 MARVARVLLSVPASAAVLERDFSTTGRLITGSRSRLAGEYVEMTLFLNGNKEYIPVEVPSLSESQIKEAVP 71
            +AR ARV+   PASAAVLERDF+    ++  SRS    +YVEM LFL+GN + IP ++P L +  ++  +P
Sbjct:  561 LARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDEDVQAKIP 631          
BLAST of mRNA_A-nodosum_M_contig12514.1.1 vs. uniprot
Match: A0A662X2G8_9STRA (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X2G8_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.840e-8
Identity = 31/69 (44.93%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    4 VARVLLSVPASAAVLERDFSTTGRLITGSRSRLAGEYVEMTLFLNGNKEYIPV-EVPSLSESQIKEAVP 71
            VARV+ S+PAS+A +ERDF   GR++   RS LA   ++M+ FLN N+EY  + + P LS     E +P
Sbjct:  159 VARVVYSMPASSAQIERDFGMAGRMVVPHRSSLAPYNIDMSTFLNCNREYCDITQCPKLSADTASERIP 227          
BLAST of mRNA_A-nodosum_M_contig12514.1.1 vs. uniprot
Match: A0A662Y7F3_9STRA (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y7F3_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.380e-8
Identity = 31/69 (44.93%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    4 VARVLLSVPASAAVLERDFSTTGRLITGSRSRLAGEYVEMTLFLNGNKEYIPV-EVPSLSESQIKEAVP 71
            VARV+ S+PAS+A +ERDF   GR++   RS LA   ++M+ FLN N+EY  + + P LS     E +P
Sbjct:  244 VARVVYSMPASSAQIERDFGMAGRMVVPHRSSLAPYNIDMSTFLNCNREYCDITQCPKLSADTASERIP 312          
BLAST of mRNA_A-nodosum_M_contig12514.1.1 vs. uniprot
Match: A0A662XJG1_9STRA (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XJG1_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 8.720e-8
Identity = 30/69 (43.48%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    4 VARVLLSVPASAAVLERDFSTTGRLITGSRSRLAGEYVEMTLFLNGNKEYIPV-EVPSLSESQIKEAVP 71
            VARV+ S+PAS+A ++RDF   GR++   RS LA   ++M+ FLN N+EY  + + P LS     E +P
Sbjct:  352 VARVVYSMPASSAQIKRDFGMAGRMVVPHRSSLAPYNIDMSTFLNCNREYCDITQCPKLSAETASERIP 420          
BLAST of mRNA_A-nodosum_M_contig12514.1.1 vs. uniprot
Match: A0A662WKZ2_9STRA (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKZ2_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 3.110e-7
Identity = 29/69 (42.03%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    4 VARVLLSVPASAAVLERDFSTTGRLITGSRSRLAGEYVEMTLFLNGNKEYIPV-EVPSLSESQIKEAVP 71
            VARV+ S+PAS+A +ERDF   G+++   RS LA   ++M+ FLN N++Y  + + P LS     E +P
Sbjct:  619 VARVVYSMPASSAQIERDFGMAGQMVVPHRSSLAPYNIDMSTFLNCNRDYCNITQCPKLSAETASERIP 687          
BLAST of mRNA_A-nodosum_M_contig12514.1.1 vs. uniprot
Match: A0A0W8BWD8_PHYNI (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A0W8BWD8_PHYNI)

HSP 1 Score: 52.0 bits (123), Expect = 9.480e-7
Identity = 26/69 (37.68%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    4 VARVLLSVPASAAVLERDFSTTGRLITGSRSRLAGEYVEMTLFLNGNKEYIPV-EVPSLSESQIKEAVP 71
            VARVL ++  S+  +ERDF   G+L+T  R  +A + VEM+ FLN N++++ V + P +    I + +P
Sbjct:   20 VARVLFAISTSSTQIERDFGIAGQLVTPQRGSIAPQNVEMSAFLNCNRQFVDVTQCPKIHPRDIDKFIP 88          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig12514.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5KVU5_9PHAE1.840e-2680.28Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JZ82_9PHAE7.870e-1552.11Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KCJ3_9PHAE2.860e-1451.39Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L5L6_9PHAE1.010e-1255.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LBK4_ECTSI2.620e-1146.48Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A662X2G8_9STRA1.840e-844.93Dimer_Tnp_hAT domain-containing protein n=1 Tax=No... [more]
A0A662Y7F3_9STRA2.380e-844.93Dimer_Tnp_hAT domain-containing protein (Fragment)... [more]
A0A662XJG1_9STRA8.720e-843.48Dimer_Tnp_hAT domain-containing protein n=1 Tax=No... [more]
A0A662WKZ2_9STRA3.110e-742.03Dimer_Tnp_hAT domain-containing protein n=1 Tax=No... [more]
A0A0W8BWD8_PHYNI9.480e-737.68Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 2..49
e-value: 4.5E-9
score: 36.0
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig12514contigA-nodosum_M_contig12514:4916..5128 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig12514.1.1mRNA_A-nodosum_M_contig12514.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig12514 4907..5128 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig12514.1.1 ID=prot_A-nodosum_M_contig12514.1.1|Name=mRNA_A-nodosum_M_contig12514.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=71bp
MARVARVLLSVPASAAVLERDFSTTGRLITGSRSRLAGEYVEMTLFLNGN
KEYIPVEVPSLSESQIKEAVP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf