prot_A-nodosum_M_contig125.15.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig125.15.1
Unique Nameprot_A-nodosum_M_contig125.15.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length132
Homology
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BLAST of mRNA_A-nodosum_M_contig125.15.1 vs. uniprot
Match: A0A6H5JWH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWH5_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 2.430e-18
Identity = 45/77 (58.44%), Postives = 55/77 (71.43%), Query Frame = 0 
Query:    1 MTGIIFCGTPKRASTVQRRVRSKESYALVRSIKHTYSGIRFFRASSCNRRITDTISVVERFGRKPLCSYGRIPTRSQ 77
            MT  IF GTPKR ST   R R  ESYALVRS KH  + + FF ASS +R + +++S V+R GRKPLCS GR+P+RSQ
Sbjct:   98 MTASIFGGTPKRRSTSHSRSRPTESYALVRSTKHANTAVLFFLASSWSRWMANSMSSVDRCGRKPLCSSGRMPSRSQ 174
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BLAST of mRNA_A-nodosum_M_contig125.15.1 vs. uniprot
Match: A0A6H5L1U5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1U5_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 2.390e-13
Identity = 48/93 (51.61%), Postives = 54/93 (58.06%), Query Frame = 0 
Query:    1 MTGIIFCGTPKRASTVQRRVRSKESYALVRSIKHTYSGIRFFRASSCNRRITDTISVVERFGRKPLCSYGRIPTRSQYSLRCRA--IIFSTIL 91
            MT IIF G P  AST     RS ESYAL R  KH  SG  F R SS  RR T++IS V+R GR P CS GR+   SQ  LR R   I+  T+L
Sbjct:  178 MTLIIFAGIPALASTFHSISRSTESYALFRWTKHMQSGSFFLRPSSWGRRTTNSISTVDRPGRNPHCSSGRMWLASQQELRRRLVRILMGTLL 270
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig125.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JWH5_9PHAE2.430e-1858.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1U5_9PHAE2.390e-1351.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig125contigA-nodosum_M_contig125:57070..57465 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig125.15.1mRNA_A-nodosum_M_contig125.15.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig125 56894..57465 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig125.15.1 ID=prot_A-nodosum_M_contig125.15.1|Name=mRNA_A-nodosum_M_contig125.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=132bp
MTGIIFCGTPKRASTVQRRVRSKESYALVRSIKHTYSGIRFFRASSCNRR
ITDTISVVERFGRKPLCSYGRIPTRSQYSLRCRAIIFSTILPACATSEMP
LYLPHTVRSFFLWSTMMRANGQDSWGFFKDAQ
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