prot_A-nodosum_M_contig1227.43.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1227.43.1
Unique Nameprot_A-nodosum_M_contig1227.43.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length51
Homology
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BLAST of mRNA_A-nodosum_M_contig1227.43.1 vs. uniprot
Match: D8LRH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRH3_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 3.820e-8
Identity = 30/50 (60.00%), Postives = 38/50 (76.00%), Query Frame = 0 
Query:    1 MPLGSADEEIEVDIDTMDTSTLRELQSYIMELS--ASGSRQNGGADSDAD 48
            MPLGS+DEEIE+DID+MD  TLR+LQ +I ++S    G R  GG DSD+D
Sbjct: 1094 MPLGSSDEEIELDIDSMDNLTLRDLQGFIKDVSDKGGGRRGGGGVDSDSD 1143
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1227.43.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRH3_ECTSI3.820e-860.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038336NET domain superfamilyGENE3D1.20.1270.220coord: 2..39
e-value: 6.9E-8
score: 34.4
IPR027353NET domainPFAMPF17035BETcoord: 5..30
e-value: 2.1E-8
score: 34.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1227contigA-nodosum_M_contig1227:222069..222221 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1227.43.1mRNA_A-nodosum_M_contig1227.43.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1227 221845..222248 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1227.43.1 ID=prot_A-nodosum_M_contig1227.43.1|Name=mRNA_A-nodosum_M_contig1227.43.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=51bp
MPLGSADEEIEVDIDTMDTSTLRELQSYIMELSASGSRQNGGADSDADAW
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038336NET_sf
IPR027353NET_dom